RNA–Protein interactions for RNA: ENST00000466508.5

PPP1R3F-203, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 2 BASIC

Gene PPP1R3F, Length 1,885 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-203ENST00000466508 TEX14Q8IWB6 1497 aa30.3■■■□□ 2.44
PPP1R3F-203ENST00000466508 POGZQ7Z3K3 1410 aa30.3■■■□□ 2.44
PPP1R3F-203ENST00000466508 DEPDC5O75140 1603 aa30.26■■■□□ 2.44
PPP1R3F-203ENST00000466508 EIF2AK4Q9P2K8 1649 aaKnown RBP30.25■■■□□ 2.43
PPP1R3F-203ENST00000466508 L3MBTL2Q969R5 705 aa30.24■■■□□ 2.43
PPP1R3F-203ENST00000466508 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.23■■■□□ 2.43
PPP1R3F-203ENST00000466508 HECW2Q9P2P5 1572 aa30.22■■■□□ 2.43
PPP1R3F-203ENST00000466508 MLH3Q9UHC1 1453 aa30.21■■■□□ 2.43
PPP1R3F-203ENST00000466508 MYT1LQ9UL68 1186 aa30.2■■■□□ 2.42
PPP1R3F-203ENST00000466508 DHX29Q7Z478 1369 aaKnown RBP30.19■■■□□ 2.42
PPP1R3F-203ENST00000466508 RICTORQ6R327 1708 aa30.16■■■□□ 2.42
PPP1R3F-203ENST00000466508 PRDM15P57071 1507 aaPredicted RBP30.12■■■□□ 2.41
PPP1R3F-203ENST00000466508 VWDEQ8N2E2 1590 aa30.12■■■□□ 2.41
PPP1R3F-203ENST00000466508 COL17A1Q9UMD9 1497 aaPredicted RBP30.11■■■□□ 2.41
PPP1R3F-203ENST00000466508 A2MP01023 1474 aa30.11■■■□□ 2.41
PPP1R3F-203ENST00000466508 ABCA6Q8N139 1617 aa30.1■■■□□ 2.41
PPP1R3F-203ENST00000466508 MROH1Q8NDA8 1641 aa30.1■■■□□ 2.41
PPP1R3F-203ENST00000466508 ATP10AO60312 1499 aa30.09■■■□□ 2.41
PPP1R3F-203ENST00000466508 TET3O43151 1660 aa30.08■■■□□ 2.41
PPP1R3F-203ENST00000466508 PLA2R1Q13018 1463 aa30.08■■■□□ 2.41
PPP1R3F-203ENST00000466508 E9PCH4 1651 aa30.08■■■□□ 2.41
PPP1R3F-203ENST00000466508 CCDC144AA2RUR9 1427 aa30.07■■■□□ 2.4
PPP1R3F-203ENST00000466508 KIF3BO15066 747 aa30.06■■■□□ 2.4
PPP1R3F-203ENST00000466508 FRMPD1Q5SYB0 1578 aa30.06■■■□□ 2.4
PPP1R3F-203ENST00000466508 RNF17Q9BXT8 1623 aaKnown RBP30.06■■■□□ 2.4
PPP1R3F-203ENST00000466508 KANK1Q14678 1352 aa30.06■■■□□ 2.4
PPP1R3F-203ENST00000466508 RAPGEF3O95398 923 aa30.05■■■□□ 2.4
PPP1R3F-203ENST00000466508 BCORL1Q5H9F3 1711 aa30.05■■■□□ 2.4
PPP1R3F-203ENST00000466508 NBPF8Q3BBV2 869 aa30.01■■■□□ 2.39
PPP1R3F-203ENST00000466508 DIP2CQ9Y2E4 1556 aa30.01■■■□□ 2.39
PPP1R3F-203ENST00000466508 SPHKAPQ2M3C7 1700 aa29.99■■■□□ 2.39
PPP1R3F-203ENST00000466508 ZMYM4Q5VZL5 1548 aa29.97■■■□□ 2.39
PPP1R3F-203ENST00000466508 UHRF1BP1Q6BDS2 1440 aa29.95■■■□□ 2.39
PPP1R3F-203ENST00000466508 TRPM2O94759 1503 aa29.95■■■□□ 2.39
PPP1R3F-203ENST00000466508 HIRIP3Q9BW71 556 aaPredicted RBP29.93■■■□□ 2.38
PPP1R3F-203ENST00000466508 LMTK2Q8IWU2 1503 aa29.93■■■□□ 2.38
PPP1R3F-203ENST00000466508 EFCAB6Q5THR3 1501 aa29.93■■■□□ 2.38
PPP1R3F-203ENST00000466508 PTPRTO14522 1441 aa29.92■■■□□ 2.38
PPP1R3F-203ENST00000466508 CEP152O94986 1710 aa29.92■■■□□ 2.38
PPP1R3F-203ENST00000466508 EIF4G2P78344 907 aaKnown RBP eCLIP29.89■■■□□ 2.386e-6■■■■□ 25.1
PPP1R3F-203ENST00000466508 YEATS2Q9ULM3 1422 aa29.88■■■□□ 2.37
PPP1R3F-203ENST00000466508 MIER1Q8N108 512 aa29.87■■■□□ 2.37
PPP1R3F-203ENST00000466508 HSPA5P11021 654 aaKnown RBP29.86■■■□□ 2.37
PPP1R3F-203ENST00000466508 RALGAPBQ86X10 1494 aa29.85■■■□□ 2.37
PPP1R3F-203ENST00000466508 DCAF11Q8TEB1 546 aa29.84■■■□□ 2.37
PPP1R3F-203ENST00000466508 CLTCL1P53675 1640 aa29.84■■■□□ 2.37
PPP1R3F-203ENST00000466508 ZNF326Q5BKZ1 582 aaKnown RBP29.82■■■□□ 2.37
PPP1R3F-203ENST00000466508 SPATA31E1Q6ZUB1 1445 aa29.81■■■□□ 2.36
PPP1R3F-203ENST00000466508 ABCC3O15438 1527 aa29.79■■■□□ 2.36
PPP1R3F-203ENST00000466508 GGT6Q6P531 493 aa29.78■■■□□ 2.36
PPP1R3F-203ENST00000466508 AEBP2Q6ZN18 517 aaPredicted RBP29.78■■■□□ 2.36
PPP1R3F-203ENST00000466508 RGL3Q3MIN7 710 aa29.78■■■□□ 2.36
PPP1R3F-203ENST00000466508 KDM2AQ9Y2K7 1162 aa29.78■■■□□ 2.36
PPP1R3F-203ENST00000466508 PRAG1Q86YV5 1406 aa29.77■■■□□ 2.36
PPP1R3F-203ENST00000466508 ZC3H13Q5T200 1668 aaKnown RBP29.76■■■□□ 2.36
PPP1R3F-203ENST00000466508 DDX10Q13206 875 aaKnown RBP29.76■■■□□ 2.35
PPP1R3F-203ENST00000466508 REREQ9P2R6 1566 aa29.75■■■□□ 2.35
PPP1R3F-203ENST00000466508 CAMSAP1Q5T5Y3 1602 aa29.75■■■□□ 2.35
PPP1R3F-203ENST00000466508 TRPM1Q7Z4N2 1603 aa29.75■■■□□ 2.35
PPP1R3F-203ENST00000466508 NEURL4Q96JN8 1562 aa29.75■■■□□ 2.35
PPP1R3F-203ENST00000466508 POLR1AO95602 1720 aaPredicted RBP29.73■■■□□ 2.35
PPP1R3F-203ENST00000466508 NPATQ14207 1427 aa29.73■■■□□ 2.35
PPP1R3F-203ENST00000466508 WASHC2CQ9Y4E1 1318 aa29.71■■■□□ 2.35
PPP1R3F-203ENST00000466508 KIF1BO60333 1816 aa29.71■■■□□ 2.35
PPP1R3F-203ENST00000466508 USP47Q96K76 1375 aa29.71■■■□□ 2.35
PPP1R3F-203ENST00000466508 CFAP65Q6ZU64 1925 aaKnown RBP29.68■■■□□ 2.34
PPP1R3F-203ENST00000466508 UGGT1Q9NYU2 1555 aa29.68■■■□□ 2.34
PPP1R3F-203ENST00000466508 KDM4FA0A1W2PPD8 638 aa29.68■■■□□ 2.34
PPP1R3F-203ENST00000466508 WASHC2AQ641Q2 1341 aa29.66■■■□□ 2.34
PPP1R3F-203ENST00000466508 AGLP35573 1532 aa29.65■■■□□ 2.34
PPP1R3F-203ENST00000466508 ARHGEF40Q8TER5 1519 aa29.65■■■□□ 2.34
PPP1R3F-203ENST00000466508 ROCK2O75116 1388 aaKnown RBP29.64■■■□□ 2.34
PPP1R3F-203ENST00000466508 CARD11Q9BXL7 1154 aa29.64■■■□□ 2.34
PPP1R3F-203ENST00000466508 CNTLNQ9NXG0 1405 aa29.64■■■□□ 2.33
PPP1R3F-203ENST00000466508 LAMC1P11047 1609 aa29.63■■■□□ 2.33
PPP1R3F-203ENST00000466508 ARHGAP31Q2M1Z3 1444 aa29.62■■■□□ 2.33
PPP1R3F-203ENST00000466508 MADDQ8WXG6 1647 aa29.62■■■□□ 2.33
PPP1R3F-203ENST00000466508 SIGLEC1Q9BZZ2 1709 aa29.62■■■□□ 2.33
PPP1R3F-203ENST00000466508 STAC3Q96MF2 364 aa29.61■■■□□ 2.33
PPP1R3F-203ENST00000466508 GPRASP1Q5JY77 1395 aa29.6■■■□□ 2.33
PPP1R3F-203ENST00000466508 MROH2AA6NES4 1674 aa29.59■■■□□ 2.33
PPP1R3F-203ENST00000466508 CCDC7Q96M83 1385 aa29.59■■■□□ 2.33
PPP1R3F-203ENST00000466508 NOS1P29475 1434 aa29.58■■■□□ 2.33
PPP1R3F-203ENST00000466508 ADGRB3O60242 1522 aa29.57■■■□□ 2.32
PPP1R3F-203ENST00000466508 IFT172Q9UG01 1749 aa29.57■■■□□ 2.32
PPP1R3F-203ENST00000466508 C11orf95C9JLR9 678 aaPredicted RBP29.57■■■□□ 2.32
PPP1R3F-203ENST00000466508 PIK3C2BO00750 1634 aa29.54■■■□□ 2.32
PPP1R3F-203ENST00000466508 SYNMO15061 1565 aa29.53■■■□□ 2.32
PPP1R3F-203ENST00000466508 MYOM2P54296 1465 aa29.51■■■□□ 2.32
PPP1R3F-203ENST00000466508 KIF7Q2M1P5 1343 aa29.51■■■□□ 2.31
PPP1R3F-203ENST00000466508 NBPF1Q3BBV0 1214 aa29.51■■■□□ 2.31
PPP1R3F-203ENST00000466508 PREX1Q8TCU6 1659 aa29.5■■■□□ 2.31
PPP1R3F-203ENST00000466508 ARID4BQ4LE39 1312 aaPredicted RBP29.5■■■□□ 2.31
PPP1R3F-203ENST00000466508 PPP6R1Q9UPN7 881 aa29.49■■■□□ 2.31
PPP1R3F-203ENST00000466508 KIAA1210Q9ULL0 1709 aa29.49■■■□□ 2.31
PPP1R3F-203ENST00000466508 ST20-MTHFSA0A0A6YYL1 179 aa29.45■■■□□ 2.31
PPP1R3F-203ENST00000466508 PPLO60437 1756 aa29.45■■■□□ 2.3
PPP1R3F-203ENST00000466508 CLTCQ00610 1675 aaKnown RBP29.44■■■□□ 2.3
PPP1R3F-203ENST00000466508 ANP32CO43423 234 aa29.44■■■□□ 2.3
PPP1R3F-203ENST00000466508 IQGAP1P46940 1657 aa29.42■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms