RNA–Protein interactions for RNA: ENST00000466425.1

PSMB4-202, Transcript of proteasome subunit beta 4, humanhuman

TSL 2

Gene PSMB4, Length 665 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-202ENST00000466425 MYT1LQ9UL68 1186 aa9.61□□□□□ -0.87
PSMB4-202ENST00000466425 UGGT2Q9NYU1 1516 aa9.61□□□□□ -0.87
PSMB4-202ENST00000466425 CEP170Q5SW79 1584 aa9.6□□□□□ -0.87
PSMB4-202ENST00000466425 ITGAEP38570 1179 aa9.6□□□□□ -0.87
PSMB4-202ENST00000466425 DIEXFQ68CQ4 756 aaKnown RBP9.6□□□□□ -0.87
PSMB4-202ENST00000466425 CHMP7Q8WUX9 453 aaPredicted RBP9.6□□□□□ -0.87
PSMB4-202ENST00000466425 SHROOM2Q13796 1616 aa9.6□□□□□ -0.87
PSMB4-202ENST00000466425 ARHGEF11O15085 1522 aa9.59□□□□□ -0.87
PSMB4-202ENST00000466425 ACIN1Q9UKV3 1341 aaKnown RBP9.58□□□□□ -0.88
PSMB4-202ENST00000466425 FGD6Q6ZV73 1430 aa9.58□□□□□ -0.88
PSMB4-202ENST00000466425 EHBP1L1Q8N3D4 1523 aa9.58□□□□□ -0.88
PSMB4-202ENST00000466425 GSE1Q14687 1217 aa9.58□□□□□ -0.88
PSMB4-202ENST00000466425 CDK11AQ9UQ88 783 aaPredicted RBP9.58□□□□□ -0.88
PSMB4-202ENST00000466425 NUP160Q12769 1436 aa9.57□□□□□ -0.88
PSMB4-202ENST00000466425 PYGBP11216 843 aa9.57□□□□□ -0.88
PSMB4-202ENST00000466425 RAB3GAP2Q9H2M9 1393 aa9.57□□□□□ -0.88
PSMB4-202ENST00000466425 MYOM3Q5VTT5 1437 aa9.56□□□□□ -0.88
PSMB4-202ENST00000466425 HECW1Q76N89 1606 aa9.56□□□□□ -0.88
PSMB4-202ENST00000466425 OCEL1Q9H607 264 aa9.56□□□□□ -0.88
PSMB4-202ENST00000466425 TIMELESSQ9UNS1 1208 aa9.56□□□□□ -0.88
PSMB4-202ENST00000466425 PCDHB13Q9Y5F0 798 aa9.56□□□□□ -0.88
PSMB4-202ENST00000466425 NCOA2Q15596 1464 aa9.55□□□□□ -0.88
PSMB4-202ENST00000466425 TMEM106CQ9BVX2 250 aa9.55□□□□□ -0.88
PSMB4-202ENST00000466425 CARMIL2Q6F5E8 1435 aa9.55□□□□□ -0.88
PSMB4-202ENST00000466425 EPRSP07814 1512 aaKnown RBP9.53□□□□□ -0.88
PSMB4-202ENST00000466425 SGIP1Q9BQI5 828 aa9.53□□□□□ -0.88
PSMB4-202ENST00000466425 MIA2Q96PC5 1412 aa9.53□□□□□ -0.88
PSMB4-202ENST00000466425 SUPT6HQ7KZ85 1726 aaKnown RBP9.51□□□□□ -0.89
PSMB4-202ENST00000466425 DISP1Q96F81 1524 aa9.51□□□□□ -0.89
PSMB4-202ENST00000466425 HFM1A2PYH4 1435 aa9.5□□□□□ -0.89
PSMB4-202ENST00000466425 JPH4Q96JJ6 628 aa9.5□□□□□ -0.89
PSMB4-202ENST00000466425 KIAA0556O60303 1618 aa9.49□□□□□ -0.89
PSMB4-202ENST00000466425 TCOF1Q13428 1488 aaKnown RBP9.49□□□□□ -0.89
PSMB4-202ENST00000466425 IFNL1Q8IU54 200 aa9.48□□□□□ -0.89
PSMB4-202ENST00000466425 AKNAQ7Z591 1439 aa9.48□□□□□ -0.89
PSMB4-202ENST00000466425 CENPBP07199 599 aaPredicted RBP9.47□□□□□ -0.89
PSMB4-202ENST00000466425 PLCB2Q00722 1185 aa9.47□□□□□ -0.89
PSMB4-202ENST00000466425 C3orf67Q6ZVT6 689 aa9.47□□□□□ -0.89
PSMB4-202ENST00000466425 UACAQ9BZF9 1416 aa9.47□□□□□ -0.89
PSMB4-202ENST00000466425 PRKCSHP14314 528 aaPredicted RBP9.46□□□□□ -0.9
PSMB4-202ENST00000466425 PCDHB8Q9UN66 801 aa9.46□□□□□ -0.9
PSMB4-202ENST00000466425 NUP153P49790 1475 aaKnown RBP9.45□□□□□ -0.9
PSMB4-202ENST00000466425 ERCC6L2Q5T890 1561 aa9.45□□□□□ -0.9
PSMB4-202ENST00000466425 TROQ12816 1431 aaPredicted RBP9.44□□□□□ -0.9
PSMB4-202ENST00000466425 MAPKBP1O60336 1514 aa9.44□□□□□ -0.9
PSMB4-202ENST00000466425 CDK13Q14004 1512 aaKnown RBP9.44□□□□□ -0.9
PSMB4-202ENST00000466425 PTPN23Q9H3S7 1636 aa9.44□□□□□ -0.9
PSMB4-202ENST00000466425 RAPGEF6Q8TEU7 1601 aa9.43□□□□□ -0.9
PSMB4-202ENST00000466425 MAGI3Q5TCQ9 1506 aa9.43□□□□□ -0.9
PSMB4-202ENST00000466425 NAIPQ13075 1403 aa9.43□□□□□ -0.9
PSMB4-202ENST00000466425 ROCK1Q13464 1354 aa9.43□□□□□ -0.9
PSMB4-202ENST00000466425 PLEKHD1A6NEE1 506 aa9.43□□□□□ -0.9
PSMB4-202ENST00000466425 ERBB3P21860 1342 aa9.42□□□□□ -0.9
PSMB4-202ENST00000466425 PTPRKQ15262 1439 aa9.41□□□□□ -0.9
PSMB4-202ENST00000466425 PRG4Q92954 1404 aaPredicted RBP9.41□□□□□ -0.9
PSMB4-202ENST00000466425 ZNF467Q7Z7K2 595 aaPredicted RBP9.41□□□□□ -0.9
PSMB4-202ENST00000466425 ARID3CA6NKF2 412 aa9.4□□□□□ -0.9
PSMB4-202ENST00000466425 CHRM1P11229 460 aaPredicted RBP9.4□□□□□ -0.9
PSMB4-202ENST00000466425 NEUROD1Q13562 356 aa9.4□□□□□ -0.9
PSMB4-202ENST00000466425 CFDP1Q9UEE9 299 aaPredicted RBP9.4□□□□□ -0.9
PSMB4-202ENST00000466425 PTPRGP23470 1445 aa9.39□□□□□ -0.91
PSMB4-202ENST00000466425 TONSLQ96HA7 1378 aa9.39□□□□□ -0.91
PSMB4-202ENST00000466425 PLA2G2EQ9NZK7 142 aa9.39□□□□□ -0.91
PSMB4-202ENST00000466425 PPP1R15AO75807 674 aaPredicted RBP9.38□□□□□ -0.91
PSMB4-202ENST00000466425 RRP7BPQ9NSQ0 103 aa9.38□□□□□ -0.91
PSMB4-202ENST00000466425 LRRIQ1Q96JM4 1722 aa9.38□□□□□ -0.91
PSMB4-202ENST00000466425 PLB1Q6P1J6 1458 aa9.38□□□□□ -0.91
PSMB4-202ENST00000466425 DAPK1P53355 1430 aa9.38□□□□□ -0.91
PSMB4-202ENST00000466425 KIF13AQ9H1H9 1805 aa9.38□□□□□ -0.91
PSMB4-202ENST00000466425 HAP1P54257 671 aaPredicted RBP9.37□□□□□ -0.91
PSMB4-202ENST00000466425 CYB5RLQ6IPT4 315 aa9.37□□□□□ -0.91
PSMB4-202ENST00000466425 TRIM52Q96A61 297 aa9.37□□□□□ -0.91
PSMB4-202ENST00000466425 CHIC2Q9UKJ5 165 aa9.37□□□□□ -0.91
PSMB4-202ENST00000466425 ADCY10Q96PN6 1610 aa9.37□□□□□ -0.91
PSMB4-202ENST00000466425 PTGER2P43116 358 aa9.36□□□□□ -0.91
PSMB4-202ENST00000466425 SIN3AQ96ST3 1273 aa9.36□□□□□ -0.91
PSMB4-202ENST00000466425 ABCA8O94911 1581 aa9.36□□□□□ -0.91
PSMB4-202ENST00000466425 ABCC5O15440 1437 aa9.35□□□□□ -0.91
PSMB4-202ENST00000466425 BCANQ96GW7 911 aa9.35□□□□□ -0.91
PSMB4-202ENST00000466425 RSPH4AQ5TD94 716 aa9.34□□□□□ -0.91
PSMB4-202ENST00000466425 GPATCH8Q9UKJ3 1502 aaKnown RBP9.34□□□□□ -0.91
PSMB4-202ENST00000466425 ANKRD30AQ9BXX3 1397 aa9.34□□□□□ -0.91
PSMB4-202ENST00000466425 ATP10BO94823 1461 aa9.34□□□□□ -0.91
PSMB4-202ENST00000466425 ECM2O94769 699 aaPredicted RBP9.33□□□□□ -0.92
PSMB4-202ENST00000466425 HOXB1P14653 301 aaPredicted RBP9.33□□□□□ -0.92
PSMB4-202ENST00000466425 PSEN1P49768 467 aa9.33□□□□□ -0.92
PSMB4-202ENST00000466425 GOLGA2Q08379 1002 aa9.33□□□□□ -0.92
PSMB4-202ENST00000466425 L3MBTL3Q96JM7 780 aaPredicted RBP9.33□□□□□ -0.92
PSMB4-202ENST00000466425 TSPY4P0CV99 314 aa9.32□□□□□ -0.92
PSMB4-202ENST00000466425 TSPY10P0CW01 314 aa9.32□□□□□ -0.92
PSMB4-202ENST00000466425 MPHOSPH9Q99550 1183 aa9.32□□□□□ -0.92
PSMB4-202ENST00000466425 TAOK2Q9UL54 1235 aa9.32□□□□□ -0.92
PSMB4-202ENST00000466425 CAMSAP2Q08AD1 1489 aa9.32□□□□□ -0.92
PSMB4-202ENST00000466425 DNMT1P26358 1616 aaKnown RBP9.31□□□□□ -0.92
PSMB4-202ENST00000466425 PDAP1Q13442 181 aaKnown RBP9.31□□□□□ -0.92
PSMB4-202ENST00000466425 VARS2Q5ST30 1063 aaKnown RBP9.31□□□□□ -0.92
PSMB4-202ENST00000466425 ZNF710Q8N1W2 664 aa9.31□□□□□ -0.92
PSMB4-202ENST00000466425 ADGRL2O95490 1459 aa9.31□□□□□ -0.92
PSMB4-202ENST00000466425 GCC2Q8IWJ2 1684 aa9.31□□□□□ -0.92
PSMB4-202ENST00000466425 ITSN2Q9NZM3 1697 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms