RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 MROH2AA6NES4 1674 aa15.04■□□□□ -0
RTFDC1-205ENST00000466260 PREX1Q8TCU6 1659 aa15.03■□□□□ -0
RTFDC1-205ENST00000466260 ABCC5O15440 1437 aa15.03■□□□□ -0
RTFDC1-205ENST00000466260 DHX29Q7Z478 1369 aaKnown RBP15.02■□□□□ -0
RTFDC1-205ENST00000466260 KIF3BO15066 747 aa15.02■□□□□ -0
RTFDC1-205ENST00000466260 CHIC2Q9UKJ5 165 aa15.02■□□□□ -0
RTFDC1-205ENST00000466260 SHANK2Q9UPX8 1470 aa15.01□□□□□ -0.01
RTFDC1-205ENST00000466260 CEP152O94986 1710 aa15□□□□□ -0.01
RTFDC1-205ENST00000466260 EIF2AK4Q9P2K8 1649 aaKnown RBP15□□□□□ -0.01
RTFDC1-205ENST00000466260 DMRT2Q9Y5R5 561 aa15□□□□□ -0.01
RTFDC1-205ENST00000466260 LMTK3Q96Q04 1460 aa14.99□□□□□ -0.01
RTFDC1-205ENST00000466260 CNTLNQ9NXG0 1405 aa14.99□□□□□ -0.01
RTFDC1-205ENST00000466260 DUOX2Q9NRD8 1548 aa14.98□□□□□ -0.01
RTFDC1-205ENST00000466260 RRP7BPQ9NSQ0 103 aa14.98□□□□□ -0.01
RTFDC1-205ENST00000466260 KIF15Q9NS87 1388 aa14.98□□□□□ -0.01
RTFDC1-205ENST00000466260 RNF17Q9BXT8 1623 aaKnown RBP14.97□□□□□ -0.01
RTFDC1-205ENST00000466260 KDM5DQ9BY66 1539 aa14.97□□□□□ -0.01
RTFDC1-205ENST00000466260 CFAP65Q6ZU64 1925 aaKnown RBP14.96□□□□□ -0.01
RTFDC1-205ENST00000466260 ITGAEP38570 1179 aa14.96□□□□□ -0.01
RTFDC1-205ENST00000466260 HSPA2P54652 639 aa14.96□□□□□ -0.01
RTFDC1-205ENST00000466260 SETD1BQ9UPS6 1966 aaKnown RBP14.95□□□□□ -0.02
RTFDC1-205ENST00000466260 ZMYM3Q14202 1370 aa14.95□□□□□ -0.02
RTFDC1-205ENST00000466260 ZC3H13Q5T200 1668 aaKnown RBP14.94□□□□□ -0.02
RTFDC1-205ENST00000466260 MROH1Q8NDA8 1641 aa14.94□□□□□ -0.02
RTFDC1-205ENST00000466260 UHRF1BP1Q6BDS2 1440 aa14.93□□□□□ -0.02
RTFDC1-205ENST00000466260 MYO3AQ8NEV4 1616 aa14.93□□□□□ -0.02
RTFDC1-205ENST00000466260 ANKRD30AQ9BXX3 1397 aa14.93□□□□□ -0.02
RTFDC1-205ENST00000466260 CAMSAP1Q5T5Y3 1602 aa14.92□□□□□ -0.02
RTFDC1-205ENST00000466260 ERBINQ96RT1 1412 aa14.92□□□□□ -0.02
RTFDC1-205ENST00000466260 WASHC2CQ9Y4E1 1318 aa14.92□□□□□ -0.02
RTFDC1-205ENST00000466260 ADGRL2O95490 1459 aa14.9□□□□□ -0.02
RTFDC1-205ENST00000466260 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.9□□□□□ -0.023e-8■■□□□ 14.4
RTFDC1-205ENST00000466260 DEPDC5O75140 1603 aa14.9□□□□□ -0.02
RTFDC1-205ENST00000466260 ABCC3O15438 1527 aa14.9□□□□□ -0.02
RTFDC1-205ENST00000466260 PTPRKQ15262 1439 aa14.9□□□□□ -0.02
RTFDC1-205ENST00000466260 PRDM15P57071 1507 aaPredicted RBP14.89□□□□□ -0.03
RTFDC1-205ENST00000466260 FAM135AQ9P2D6 1515 aa14.89□□□□□ -0.03
RTFDC1-205ENST00000466260 NCOA1Q15788 1441 aa14.89□□□□□ -0.03
RTFDC1-205ENST00000466260 ZNF142P52746 1687 aaPredicted RBP14.87□□□□□ -0.03
RTFDC1-205ENST00000466260 NPATQ14207 1427 aa14.86□□□□□ -0.03
RTFDC1-205ENST00000466260 CEP170BQ9Y4F5 1589 aaPredicted RBP14.85□□□□□ -0.03
RTFDC1-205ENST00000466260 RRBP1Q9P2E9 1410 aaKnown RBP14.85□□□□□ -0.03
RTFDC1-205ENST00000466260 PZPP20742 1482 aa14.85□□□□□ -0.03
RTFDC1-205ENST00000466260 FBXO31Q5XUX0 539 aaPredicted RBP14.85□□□□□ -0.03
RTFDC1-205ENST00000466260 SLC4A1APQ9BWU0 796 aaKnown RBP14.85□□□□□ -0.03
RTFDC1-205ENST00000466260 RNF216Q9NWF9 866 aaPredicted RBP14.85□□□□□ -0.03
RTFDC1-205ENST00000466260 STRCQ7RTU9 1775 aa14.85□□□□□ -0.03
RTFDC1-205ENST00000466260 ANKRD50Q9ULJ7 1429 aa14.83□□□□□ -0.03
RTFDC1-205ENST00000466260 KANK1Q14678 1352 aa14.83□□□□□ -0.04
RTFDC1-205ENST00000466260 TNRQ92752 1358 aa14.82□□□□□ -0.04
RTFDC1-205ENST00000466260 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.81□□□□□ -0.04
RTFDC1-205ENST00000466260 UNC13BO14795 1591 aa14.81□□□□□ -0.04
RTFDC1-205ENST00000466260 GCC2Q8IWJ2 1684 aa14.81□□□□□ -0.04
RTFDC1-205ENST00000466260 SPATA31D1Q6ZQQ2 1576 aa14.8□□□□□ -0.04
RTFDC1-205ENST00000466260 ERVK-7P63135 1459 aa14.79□□□□□ -0.04
RTFDC1-205ENST00000466260 ROCK1Q13464 1354 aa14.79□□□□□ -0.04
RTFDC1-205ENST00000466260 POLR1AO95602 1720 aaPredicted RBP14.78□□□□□ -0.04
RTFDC1-205ENST00000466260 VWDEQ8N2E2 1590 aa14.78□□□□□ -0.04
RTFDC1-205ENST00000466260 A2ML1A8K2U0 1454 aa14.77□□□□□ -0.04
RTFDC1-205ENST00000466260 TET3O43151 1660 aa14.77□□□□□ -0.05
RTFDC1-205ENST00000466260 EFCAB6Q5THR3 1501 aa14.76□□□□□ -0.05
RTFDC1-205ENST00000466260 UGGT1Q9NYU2 1555 aa14.75□□□□□ -0.05
RTFDC1-205ENST00000466260 LMTK2Q8IWU2 1503 aa14.75□□□□□ -0.05
RTFDC1-205ENST00000466260 IQGAP3Q86VI3 1631 aa14.74□□□□□ -0.05
RTFDC1-205ENST00000466260 UBR1Q8IWV7 1749 aa14.74□□□□□ -0.05
RTFDC1-205ENST00000466260 E9PCH4 1651 aa14.74□□□□□ -0.05
RTFDC1-205ENST00000466260 PIK3C2BO00750 1634 aa14.74□□□□□ -0.05
RTFDC1-205ENST00000466260 HOXD11P31277 338 aaPredicted RBP14.73□□□□□ -0.05
RTFDC1-205ENST00000466260 NLRP1Q9C000 1473 aa14.73□□□□□ -0.05
RTFDC1-205ENST00000466260 SYNMO15061 1565 aa14.73□□□□□ -0.05
RTFDC1-205ENST00000466260 NCKAP5LQ9HCH0 1330 aa14.72□□□□□ -0.05
RTFDC1-205ENST00000466260 ARHGAP31Q2M1Z3 1444 aa14.72□□□□□ -0.05
RTFDC1-205ENST00000466260 MYO5BQ9ULV0 1848 aa14.71□□□□□ -0.05
RTFDC1-205ENST00000466260 NAIPQ13075 1403 aa14.7□□□□□ -0.06
RTFDC1-205ENST00000466260 NUP155O75694 1391 aa14.7□□□□□ -0.06
RTFDC1-205ENST00000466260 PLA2R1Q13018 1463 aa14.69□□□□□ -0.06
RTFDC1-205ENST00000466260 NEURL4Q96JN8 1562 aa14.68□□□□□ -0.06
RTFDC1-205ENST00000466260 SPHKAPQ2M3C7 1700 aa14.67□□□□□ -0.06
RTFDC1-205ENST00000466260 STAG3Q9UJ98 1225 aa14.66□□□□□ -0.06
RTFDC1-205ENST00000466260 HFM1A2PYH4 1435 aa14.66□□□□□ -0.06
RTFDC1-205ENST00000466260 PTPRTO14522 1441 aa14.66□□□□□ -0.06
RTFDC1-205ENST00000466260 RPRD2Q5VT52 1461 aaKnown RBP14.65□□□□□ -0.06
RTFDC1-205ENST00000466260 TRIM52Q96A61 297 aa14.65□□□□□ -0.06
RTFDC1-205ENST00000466260 NOS1P29475 1434 aa14.65□□□□□ -0.06
RTFDC1-205ENST00000466260 IQGAP1P46940 1657 aa14.65□□□□□ -0.06
RTFDC1-205ENST00000466260 THEMISQ8N1K5 641 aaPredicted RBP14.64□□□□□ -0.07
RTFDC1-205ENST00000466260 ADGRB3O60242 1522 aa14.64□□□□□ -0.07
RTFDC1-205ENST00000466260 PKD2Q13563 968 aa14.63□□□□□ -0.07
RTFDC1-205ENST00000466260 KDM5AP29375 1690 aaKnown RBP14.61□□□□□ -0.07
RTFDC1-205ENST00000466260 CHGAP10645 457 aaKnown RBP14.61□□□□□ -0.07
RTFDC1-205ENST00000466260 IDI1Q13907 227 aa14.61□□□□□ -0.07
RTFDC1-205ENST00000466260 ANKLE2Q86XL3 938 aa14.61□□□□□ -0.07
RTFDC1-205ENST00000466260 NPHP4O75161 1426 aaPredicted RBP14.59□□□□□ -0.07
RTFDC1-205ENST00000466260 ZNF335Q9H4Z2 1342 aaPredicted RBP14.59□□□□□ -0.07
RTFDC1-205ENST00000466260 TMEM131LA2VDJ0 1609 aa14.59□□□□□ -0.07
RTFDC1-205ENST00000466260 SCAF11Q99590 1463 aaKnown RBP14.58□□□□□ -0.08
RTFDC1-205ENST00000466260 SLIT1O75093 1534 aa14.58□□□□□ -0.08
RTFDC1-205ENST00000466260 LTBP4Q8N2S1 1624 aa14.58□□□□□ -0.08
RTFDC1-205ENST00000466260 KIF1BO60333 1816 aa14.57□□□□□ -0.08
RTFDC1-205ENST00000466260 CLTCL1P53675 1640 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms