RNA–Protein interactions for RNA: ENST00000466194.1

HMGN2-205, Transcript of high mobility group nucleosomal binding domain 2, humanhuman

TSL 2

Gene HMGN2, Length 952 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2-205ENST00000466194 PPARGC1BQ86YN6 1023 aaKnown RBP28.01■■■□□ 2.07
HMGN2-205ENST00000466194 MAST1Q9Y2H9 1570 aa28.01■■■□□ 2.07
HMGN2-205ENST00000466194 TCOF1Q13428 1488 aaKnown RBP27.97■■■□□ 2.07
HMGN2-205ENST00000466194 DAPK1P53355 1430 aa27.97■■■□□ 2.07
HMGN2-205ENST00000466194 KIF15Q9NS87 1388 aa27.96■■■□□ 2.07
HMGN2-205ENST00000466194 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.91■■■□□ 2.063e-13■■■□□ 16.2
HMGN2-205ENST00000466194 NCKAP5LQ9HCH0 1330 aa27.91■■■□□ 2.06
HMGN2-205ENST00000466194 KDM5DQ9BY66 1539 aa27.9■■■□□ 2.06
HMGN2-205ENST00000466194 DUOX2Q9NRD8 1548 aa27.9■■■□□ 2.06
HMGN2-205ENST00000466194 SHANK2Q9UPX8 1470 aa27.89■■■□□ 2.06
HMGN2-205ENST00000466194 FBXO41Q8TF61 875 aa27.89■■■□□ 2.06
HMGN2-205ENST00000466194 TNRQ92752 1358 aa27.88■■■□□ 2.05
HMGN2-205ENST00000466194 ANKRD30AQ9BXX3 1397 aa27.88■■■□□ 2.05
HMGN2-205ENST00000466194 STRCQ7RTU9 1775 aa27.88■■■□□ 2.05
HMGN2-205ENST00000466194 CERKQ8TCT0 537 aa27.87■■■□□ 2.05
HMGN2-205ENST00000466194 NCOA1Q15788 1441 aa27.86■■■□□ 2.05
HMGN2-205ENST00000466194 PZPP20742 1482 aa27.86■■■□□ 2.05
HMGN2-205ENST00000466194 DNMT1P26358 1616 aaKnown RBP27.85■■■□□ 2.05
HMGN2-205ENST00000466194 CAMSAP1Q5T5Y3 1602 aa27.84■■■□□ 2.05
HMGN2-205ENST00000466194 PTPRTO14522 1441 aa27.84■■■□□ 2.05
HMGN2-205ENST00000466194 FAM135AQ9P2D6 1515 aa27.83■■■□□ 2.05
HMGN2-205ENST00000466194 PKD2Q13563 968 aa27.81■■■□□ 2.04
HMGN2-205ENST00000466194 ERBINQ96RT1 1412 aa27.81■■■□□ 2.04
HMGN2-205ENST00000466194 ABCC3O15438 1527 aa27.81■■■□□ 2.04
HMGN2-205ENST00000466194 RNF17Q9BXT8 1623 aaKnown RBP27.8■■■□□ 2.04
HMGN2-205ENST00000466194 A2ML1A8K2U0 1454 aa27.79■■■□□ 2.04
HMGN2-205ENST00000466194 MYO3AQ8NEV4 1616 aa27.78■■■□□ 2.04
HMGN2-205ENST00000466194 EIF2AK4Q9P2K8 1649 aaKnown RBP27.78■■■□□ 2.04
HMGN2-205ENST00000466194 CEP170BQ9Y4F5 1589 aaPredicted RBP27.78■■■□□ 2.04
HMGN2-205ENST00000466194 CROCC2H7BZ55 1655 aa27.78■■■□□ 2.04
HMGN2-205ENST00000466194 ITGAEP38570 1179 aa27.76■■■□□ 2.03
HMGN2-205ENST00000466194 THEMISQ8N1K5 641 aaPredicted RBP27.76■■■□□ 2.03
HMGN2-205ENST00000466194 MROH1Q8NDA8 1641 aa27.76■■■□□ 2.03
HMGN2-205ENST00000466194 KANK1Q14678 1352 aa27.74■■■□□ 2.03
HMGN2-205ENST00000466194 PLA2R1Q13018 1463 aa27.72■■■□□ 2.03
HMGN2-205ENST00000466194 ADGRL2O95490 1459 aa27.71■■■□□ 2.03
HMGN2-205ENST00000466194 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.71■■■□□ 2.032e-7■■■□□ 18.1
HMGN2-205ENST00000466194 ANKLE2Q86XL3 938 aa27.7■■■□□ 2.02
HMGN2-205ENST00000466194 ZNF142P52746 1687 aaPredicted RBP27.69■■■□□ 2.02
HMGN2-205ENST00000466194 NLRP1Q9C000 1473 aa27.69■■■□□ 2.02
HMGN2-205ENST00000466194 ANKRD50Q9ULJ7 1429 aa27.67■■■□□ 2.02
HMGN2-205ENST00000466194 ERVK-7P63135 1459 aa27.67■■■□□ 2.02
HMGN2-205ENST00000466194 ARHGAP31Q2M1Z3 1444 aa27.66■■■□□ 2.02
HMGN2-205ENST00000466194 ZNF335Q9H4Z2 1342 aaPredicted RBP27.66■■■□□ 2.02
HMGN2-205ENST00000466194 ZC3H13Q5T200 1668 aaKnown RBP27.65■■■□□ 2.02
HMGN2-205ENST00000466194 PRDM15P57071 1507 aaPredicted RBP27.65■■■□□ 2.02
HMGN2-205ENST00000466194 SPATA31D1Q6ZQQ2 1576 aa27.64■■■□□ 2.01
HMGN2-205ENST00000466194 CEP152O94986 1710 aa27.64■■■□□ 2.01
HMGN2-205ENST00000466194 UGGT1Q9NYU2 1555 aa27.62■■■□□ 2.01
HMGN2-205ENST00000466194 CFAP65Q6ZU64 1925 aaKnown RBP27.6■■■□□ 2.01
HMGN2-205ENST00000466194 ROCK1Q13464 1354 aa27.59■■■□□ 2.01
HMGN2-205ENST00000466194 DEPDC5O75140 1603 aa27.58■■■□□ 2.01
HMGN2-205ENST00000466194 LTBP4Q8N2S1 1624 aa27.57■■■□□ 2
HMGN2-205ENST00000466194 IDI1Q13907 227 aa27.57■■■□□ 2
HMGN2-205ENST00000466194 STAG3Q9UJ98 1225 aa27.56■■■□□ 2
HMGN2-205ENST00000466194 LMTK2Q8IWU2 1503 aa27.54■■■□□ 2
HMGN2-205ENST00000466194 VWDEQ8N2E2 1590 aa27.54■■■□□ 2
HMGN2-205ENST00000466194 TXNDC2Q86VQ3 553 aa27.52■■■□□ 2
HMGN2-205ENST00000466194 LTKP29376 864 aa27.51■■□□□ 1.99
HMGN2-205ENST00000466194 NPHP4O75161 1426 aaPredicted RBP27.5■■□□□ 1.99
HMGN2-205ENST00000466194 NEURL4Q96JN8 1562 aa27.48■■□□□ 1.99
HMGN2-205ENST00000466194 RRBP1Q9P2E9 1410 aaKnown RBP27.47■■□□□ 1.99
HMGN2-205ENST00000466194 SLC52A1Q9NWF4 448 aa27.46■■□□□ 1.99
HMGN2-205ENST00000466194 EID1Q9Y6B2 187 aa27.46■■□□□ 1.99
HMGN2-205ENST00000466194 NUP155O75694 1391 aa27.46■■□□□ 1.99
HMGN2-205ENST00000466194 MED14O60244 1454 aa27.45■■□□□ 1.99
HMGN2-205ENST00000466194 NOS1P29475 1434 aa27.45■■□□□ 1.98
HMGN2-205ENST00000466194 EFCAB6Q5THR3 1501 aa27.42■■□□□ 1.98
HMGN2-205ENST00000466194 TMEM2Q9UHN6 1383 aa27.4■■□□□ 1.98
HMGN2-205ENST00000466194 UBAP1LF5GYI3 381 aa27.4■■□□□ 1.98
HMGN2-205ENST00000466194 UBR1Q8IWV7 1749 aa27.4■■□□□ 1.98
HMGN2-205ENST00000466194 POLR1AO95602 1720 aaPredicted RBP27.39■■□□□ 1.98
HMGN2-205ENST00000466194 SCAF11Q99590 1463 aaKnown RBP27.38■■□□□ 1.97
HMGN2-205ENST00000466194 IQSEC2Q5JU85 1478 aa27.38■■□□□ 1.97
HMGN2-205ENST00000466194 RPRD2Q5VT52 1461 aaKnown RBP27.38■■□□□ 1.97
HMGN2-205ENST00000466194 ARHGAP23Q9P227 1491 aa27.38■■□□□ 1.97
HMGN2-205ENST00000466194 SYNMO15061 1565 aa27.37■■□□□ 1.97
HMGN2-205ENST00000466194 PIK3C2BO00750 1634 aa27.37■■□□□ 1.97
HMGN2-205ENST00000466194 SLIT1O75093 1534 aa27.36■■□□□ 1.97
HMGN2-205ENST00000466194 CHGAP10645 457 aaKnown RBP27.35■■□□□ 1.97
HMGN2-205ENST00000466194 UNC13BO14795 1591 aa27.35■■□□□ 1.97
HMGN2-205ENST00000466194 TET3O43151 1660 aa27.31■■□□□ 1.96
HMGN2-205ENST00000466194 SENP3Q9H4L4 574 aaPredicted RBP27.31■■□□□ 1.96
HMGN2-205ENST00000466194 BCANQ96GW7 911 aa27.3■■□□□ 1.96
HMGN2-205ENST00000466194 NAIPQ13075 1403 aa27.3■■□□□ 1.96
HMGN2-205ENST00000466194 IQGAP1P46940 1657 aa27.3■■□□□ 1.96
HMGN2-205ENST00000466194 SLC26A8Q96RN1 970 aa27.29■■□□□ 1.96
HMGN2-205ENST00000466194 CPS1P31327 1500 aa27.28■■□□□ 1.96
HMGN2-205ENST00000466194 HDGFP51858 240 aaKnown RBP27.27■■□□□ 1.96
HMGN2-205ENST00000466194 TRIM52Q96A61 297 aa27.27■■□□□ 1.96
HMGN2-205ENST00000466194 TOM1O60784 492 aa27.25■■□□□ 1.95
HMGN2-205ENST00000466194 IQGAP3Q86VI3 1631 aa27.24■■□□□ 1.95
HMGN2-205ENST00000466194 ADGRB3O60242 1522 aa27.23■■□□□ 1.95
HMGN2-205ENST00000466194 PPP1R15AO75807 674 aaPredicted RBP27.23■■□□□ 1.95
HMGN2-205ENST00000466194 PIP4K2BP78356 416 aa27.23■■□□□ 1.95
HMGN2-205ENST00000466194 NUTM2DQ5VT03 806 aaPredicted RBP27.23■■□□□ 1.95
HMGN2-205ENST00000466194 SCAF1Q9H7N4 1312 aaKnown RBP27.22■■□□□ 1.95
HMGN2-205ENST00000466194 E9PCH4 1651 aa27.22■■□□□ 1.95
HMGN2-205ENST00000466194 GCC2Q8IWJ2 1684 aa27.22■■□□□ 1.95
HMGN2-205ENST00000466194 KDM5AP29375 1690 aaKnown RBP27.2■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms