RNA–Protein interactions for RNA: ENST00000466185.1

PRPF4B-204, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 5

Gene PRPF4B, Length 1,297 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-204ENST00000466185 MS4A1P11836 297 aa11.03□□□□□ -0.64
PRPF4B-204ENST00000466185 EN1Q05925 392 aaPredicted RBP11.03□□□□□ -0.64
PRPF4B-204ENST00000466185 PHF14O94880 888 aa11.02□□□□□ -0.65
PRPF4B-204ENST00000466185 C3orf67Q6ZVT6 689 aa11.02□□□□□ -0.65
PRPF4B-204ENST00000466185 OTUD5Q96G74 571 aa11.02□□□□□ -0.65
PRPF4B-204ENST00000466185 EPAS1Q99814 870 aa11.02□□□□□ -0.65
PRPF4B-204ENST00000466185 REPIN1Q9BWE0 567 aaKnown RBP11.02□□□□□ -0.65
PRPF4B-204ENST00000466185 ZCCHC6Q5VYS8 1495 aaKnown RBP11□□□□□ -0.65
PRPF4B-204ENST00000466185 POTEB2H3BUK9 544 aa10.99□□□□□ -0.65
PRPF4B-204ENST00000466185 MAP3K7O43318 606 aa10.99□□□□□ -0.65
PRPF4B-204ENST00000466185 POTEGQ6S5H5 508 aa10.99□□□□□ -0.65
PRPF4B-204ENST00000466185 TMUB1Q9BVT8 246 aa10.99□□□□□ -0.65
PRPF4B-204ENST00000466185 FLIIQ13045 1269 aa10.98□□□□□ -0.65
PRPF4B-204ENST00000466185 RBM33Q96EV2 1170 aaKnown RBP10.98□□□□□ -0.65
PRPF4B-204ENST00000466185 PCDH10Q9P2E7 1040 aa10.97□□□□□ -0.65
PRPF4B-204ENST00000466185 PCDHGA10Q9Y5H3 936 aa10.97□□□□□ -0.65
PRPF4B-204ENST00000466185 TSR1Q2NL82 804 aaKnown RBP10.96□□□□□ -0.65
PRPF4B-204ENST00000466185 ONECUT3O60422 494 aaPredicted RBP10.95□□□□□ -0.66
PRPF4B-204ENST00000466185 CLCN1P35523 988 aa10.95□□□□□ -0.66
PRPF4B-204ENST00000466185 SLAIN1Q8ND83 568 aa10.95□□□□□ -0.66
PRPF4B-204ENST00000466185 PCMTD1Q96MG8 357 aaPredicted RBP10.95□□□□□ -0.66
PRPF4B-204ENST00000466185 PHOX2BQ99453 314 aa10.95□□□□□ -0.66
PRPF4B-204ENST00000466185 MDM2Q00987 491 aaPredicted RBP10.94□□□□□ -0.66
PRPF4B-204ENST00000466185 TYW1BQ6NUM6 668 aa10.94□□□□□ -0.66
PRPF4B-204ENST00000466185 PCDHGA4Q9Y5G9 962 aa10.94□□□□□ -0.66
PRPF4B-204ENST00000466185 GPCPD1Q9NPB8 672 aa10.93□□□□□ -0.66
PRPF4B-204ENST00000466185 UBTFP17480 764 aaKnown RBP10.92□□□□□ -0.66
PRPF4B-204ENST00000466185 SH3D19Q5HYK7 790 aa10.92□□□□□ -0.66
PRPF4B-204ENST00000466185 C1orf115Q9H7X2 142 aa10.92□□□□□ -0.66
PRPF4B-204ENST00000466185 DCAF1Q9Y4B6 1507 aa10.91□□□□□ -0.66
PRPF4B-204ENST00000466185 MYO15BQ96JP2 1530 aa10.9□□□□□ -0.66
PRPF4B-204ENST00000466185 KDM4FA0A1W2PPD8 638 aa10.9□□□□□ -0.66
PRPF4B-204ENST00000466185 SSTR3P32745 418 aaPredicted RBP10.9□□□□□ -0.66
PRPF4B-204ENST00000466185 FBXW7Q969H0 707 aa10.9□□□□□ -0.66
PRPF4B-204ENST00000466185 JPH4Q96JJ6 628 aa10.9□□□□□ -0.66
PRPF4B-204ENST00000466185 MAMSTRQ6ZN01 415 aa10.89□□□□□ -0.67
PRPF4B-204ENST00000466185 NACADO15069 1562 aa10.89□□□□□ -0.67
PRPF4B-204ENST00000466185 FAM161AQ3B820 660 aa10.88□□□□□ -0.67
PRPF4B-204ENST00000466185 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.88□□□□□ -0.67
PRPF4B-204ENST00000466185 FOSBP53539 338 aa10.86□□□□□ -0.67
PRPF4B-204ENST00000466185 SKIV2LQ15477 1246 aaKnown RBP10.86□□□□□ -0.67
PRPF4B-204ENST00000466185 METTL3Q86U44 580 aaKnown RBP10.86□□□□□ -0.67
PRPF4B-204ENST00000466185 ARID3AQ99856 593 aa10.86□□□□□ -0.67
PRPF4B-204ENST00000466185 BEGAINQ9BUH8 593 aa10.86□□□□□ -0.67
PRPF4B-204ENST00000466185 SCUBE2Q9NQ36 999 aa10.86□□□□□ -0.67
PRPF4B-204ENST00000466185 RB1CC1Q8TDY2 1594 aa10.86□□□□□ -0.67
PRPF4B-204ENST00000466185 ARID3CA6NKF2 412 aa10.85□□□□□ -0.67
PRPF4B-204ENST00000466185 OATP04181 439 aa10.85□□□□□ -0.67
PRPF4B-204ENST00000466185 POTEJP0CG39 1038 aa10.85□□□□□ -0.67
PRPF4B-204ENST00000466185 PADI6Q6TGC4 694 aa10.85□□□□□ -0.67
PRPF4B-204ENST00000466185 NLRP7Q8WX94 980 aa10.85□□□□□ -0.67
PRPF4B-204ENST00000466185 FAM217BQ9NTX9 383 aaPredicted RBP10.85□□□□□ -0.67
PRPF4B-204ENST00000466185 C6orf132Q5T0Z8 1188 aa10.84□□□□□ -0.67
PRPF4B-204ENST00000466185 CERKQ8TCT0 537 aa10.84□□□□□ -0.67
PRPF4B-204ENST00000466185 ADGRG1Q9Y653 693 aa10.84□□□□□ -0.67
PRPF4B-204ENST00000466185 A6NJR5 290 aa10.83□□□□□ -0.68
PRPF4B-204ENST00000466185 APBB1O00213 710 aa10.83□□□□□ -0.68
PRPF4B-204ENST00000466185 PXYLP1Q8TE99 480 aa10.83□□□□□ -0.68
PRPF4B-204ENST00000466185 MCM6Q14566 821 aa10.82□□□□□ -0.68
PRPF4B-204ENST00000466185 TTC13Q8NBP0 860 aa10.82□□□□□ -0.68
PRPF4B-204ENST00000466185 PROCA1Q8NCQ7 364 aaPredicted RBP10.82□□□□□ -0.68
PRPF4B-204ENST00000466185 CLUAP1Q96AJ1 413 aa10.82□□□□□ -0.68
PRPF4B-204ENST00000466185 ZDHHC16Q969W1 377 aa10.81□□□□□ -0.68
PRPF4B-204ENST00000466185 ZNF454Q8N9F8 522 aa10.8□□□□□ -0.68
PRPF4B-204ENST00000466185 POLR3EQ9NVU0 708 aa10.79□□□□□ -0.68
PRPF4B-204ENST00000466185 RBM27Q9P2N5 1060 aaKnown RBP10.79□□□□□ -0.68
PRPF4B-204ENST00000466185 TRAK2O60296 914 aa10.78□□□□□ -0.68
PRPF4B-204ENST00000466185 MYSM1Q5VVJ2 828 aa10.78□□□□□ -0.68
PRPF4B-204ENST00000466185 ADAM33Q9BZ11 813 aa10.77□□□□□ -0.69
PRPF4B-204ENST00000466185 NUDT7P0C024 238 aa10.76□□□□□ -0.69
PRPF4B-204ENST00000466185 PRSS12P56730 875 aa10.76□□□□□ -0.69
PRPF4B-204ENST00000466185 ATP1B4Q9UN42 357 aaPredicted RBP10.76□□□□□ -0.69
PRPF4B-204ENST00000466185 KHSRPQ92945 711 aaKnown RBP eCLIP10.75□□□□□ -0.694e-7■■□□□ 13.9
PRPF4B-204ENST00000466185 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.75□□□□□ -0.69
PRPF4B-204ENST00000466185 ARSIQ5FYB1 569 aa10.73□□□□□ -0.69
PRPF4B-204ENST00000466185 RBM46Q8TBY0 533 aaKnown RBP10.73□□□□□ -0.69
PRPF4B-204ENST00000466185 CDCA7LQ96GN5 454 aa10.73□□□□□ -0.69
PRPF4B-204ENST00000466185 TBC1D2Q9BYX2 928 aa10.73□□□□□ -0.69
PRPF4B-204ENST00000466185 HOXB3P14651 431 aaPredicted RBP10.72□□□□□ -0.69
PRPF4B-204ENST00000466185 CLK2P49760 499 aaKnown RBP10.72□□□□□ -0.69
PRPF4B-204ENST00000466185 DOK7Q18PE1 504 aa10.71□□□□□ -0.69
PRPF4B-204ENST00000466185 POM121Q96HA1 1249 aa10.71□□□□□ -0.69
PRPF4B-204ENST00000466185 FAM198AQ9UFP1 575 aa10.71□□□□□ -0.69
PRPF4B-204ENST00000466185 CCDC82Q8N4S0 544 aa10.7□□□□□ -0.7
PRPF4B-204ENST00000466185 GPR153Q6NV75 609 aa10.69□□□□□ -0.7
PRPF4B-204ENST00000466185 PROSER2Q86WR7 435 aaPredicted RBP10.69□□□□□ -0.7
PRPF4B-204ENST00000466185 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.68□□□□□ -0.7
PRPF4B-204ENST00000466185 DIXDC1Q155Q3 683 aa10.68□□□□□ -0.7
PRPF4B-204ENST00000466185 FBXO31Q5XUX0 539 aaPredicted RBP10.68□□□□□ -0.7
PRPF4B-204ENST00000466185 FNBP4Q8N3X1 1017 aaPredicted RBP10.68□□□□□ -0.7
PRPF4B-204ENST00000466185 ZSWIM6Q9HCJ5 1215 aa10.68□□□□□ -0.7
PRPF4B-204ENST00000466185 PODXL2Q9NZ53 605 aa10.68□□□□□ -0.7
PRPF4B-204ENST00000466185 RCCD1A6NED2 376 aa10.67□□□□□ -0.7
PRPF4B-204ENST00000466185 SPDYE5A6NIY4 337 aa10.67□□□□□ -0.7
PRPF4B-204ENST00000466185 COL9A1P20849 921 aa10.67□□□□□ -0.7
PRPF4B-204ENST00000466185 RFC5P40937 340 aa10.67□□□□□ -0.7
PRPF4B-204ENST00000466185 EYA1Q99502 592 aa10.67□□□□□ -0.7
PRPF4B-204ENST00000466185 RAD21O60216 631 aa10.66□□□□□ -0.7
PRPF4B-204ENST00000466185 BANK1Q8NDB2 785 aa10.66□□□□□ -0.7
PRPF4B-204ENST00000466185 SPIRE2Q8WWL2 714 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms