RNA–Protein interactions for RNA: ENST00000466045.1

CDHR3-203, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 2,358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-203ENST00000466045 SMG6Q86US8 1419 aaKnown RBP12.31□□□□□ -0.44
CDHR3-203ENST00000466045 MTERF4Q7Z6M4 381 aaKnown RBP12.31□□□□□ -0.44
CDHR3-203ENST00000466045 LRRIQ1Q96JM4 1722 aa12.3□□□□□ -0.44
CDHR3-203ENST00000466045 FRAT2O75474 233 aaPredicted RBP12.3□□□□□ -0.44
CDHR3-203ENST00000466045 KIF20AO95235 890 aa12.29□□□□□ -0.44
CDHR3-203ENST00000466045 NPM1P06748 294 aaKnown RBP eCLIP12.29□□□□□ -0.44
CDHR3-203ENST00000466045 SECISBP2LQ93073 1101 aaKnown RBP12.29□□□□□ -0.44
CDHR3-203ENST00000466045 FSD2A1L4K1 749 aa12.28□□□□□ -0.44
CDHR3-203ENST00000466045 FAM50AQ14320 339 aaKnown RBP12.28□□□□□ -0.44
CDHR3-203ENST00000466045 FOXD1Q16676 465 aa12.28□□□□□ -0.44
CDHR3-203ENST00000466045 PPP4R3BQ5MIZ7 849 aa12.28□□□□□ -0.44
CDHR3-203ENST00000466045 ATP1B4Q9UN42 357 aaPredicted RBP12.28□□□□□ -0.44
CDHR3-203ENST00000466045 UACAQ9BZF9 1416 aa12.28□□□□□ -0.44
CDHR3-203ENST00000466045 FGD6Q6ZV73 1430 aa12.27□□□□□ -0.44
CDHR3-203ENST00000466045 ZHX1Q9UKY1 873 aaPredicted RBP12.27□□□□□ -0.44
CDHR3-203ENST00000466045 RNF216Q9NWF9 866 aaPredicted RBP12.27□□□□□ -0.45
CDHR3-203ENST00000466045 ESPNB1AK53 854 aa12.26□□□□□ -0.45
CDHR3-203ENST00000466045 SUPT6HQ7KZ85 1726 aaKnown RBP12.25□□□□□ -0.45
CDHR3-203ENST00000466045 XRCC6P12956 609 aaKnown RBP eCLIP12.25□□□□□ -0.45
CDHR3-203ENST00000466045 TAF3Q5VWG9 929 aa12.25□□□□□ -0.45
CDHR3-203ENST00000466045 SIN3AQ96ST3 1273 aa12.25□□□□□ -0.45
CDHR3-203ENST00000466045 EHBP1L1Q8N3D4 1523 aa12.25□□□□□ -0.45
CDHR3-203ENST00000466045 PLB1Q6P1J6 1458 aa12.25□□□□□ -0.45
CDHR3-203ENST00000466045 MTUS2Q5JR59 1369 aa12.24□□□□□ -0.45
CDHR3-203ENST00000466045 CNKSR2Q8WXI2 1034 aa12.23□□□□□ -0.45
CDHR3-203ENST00000466045 RIPK4P57078 832 aa12.23□□□□□ -0.45
CDHR3-203ENST00000466045 POGKQ9P215 609 aa12.23□□□□□ -0.45
CDHR3-203ENST00000466045 UHRF1BP1LA0JNW5 1464 aa12.23□□□□□ -0.45
CDHR3-203ENST00000466045 GTPBP4Q9BZE4 634 aaKnown RBP12.22□□□□□ -0.45
CDHR3-203ENST00000466045 CCDC18Q5T9S5 1454 aa12.22□□□□□ -0.45
CDHR3-203ENST00000466045 ADCY10Q96PN6 1610 aa12.22□□□□□ -0.45
CDHR3-203ENST00000466045 ZSCAN20P17040 1043 aaPredicted RBP12.22□□□□□ -0.45
CDHR3-203ENST00000466045 ABCC2Q92887 1545 aa12.22□□□□□ -0.45
CDHR3-203ENST00000466045 NCOA2Q15596 1464 aa12.21□□□□□ -0.45
CDHR3-203ENST00000466045 TNNT2P45379 298 aaPredicted RBP12.21□□□□□ -0.45
CDHR3-203ENST00000466045 RGS22Q8NE09 1264 aa12.21□□□□□ -0.45
CDHR3-203ENST00000466045 MYOM3Q5VTT5 1437 aa12.21□□□□□ -0.45
CDHR3-203ENST00000466045 KIAA1211Q6ZU35 1233 aa12.21□□□□□ -0.46
CDHR3-203ENST00000466045 HECW1Q76N89 1606 aa12.2□□□□□ -0.46
CDHR3-203ENST00000466045 ARID3CA6NKF2 412 aa12.2□□□□□ -0.46
CDHR3-203ENST00000466045 LETM1O95202 739 aaPredicted RBP12.2□□□□□ -0.46
CDHR3-203ENST00000466045 AKNAQ7Z591 1439 aa12.2□□□□□ -0.46
CDHR3-203ENST00000466045 TRHP20396 242 aaPredicted RBP12.2□□□□□ -0.46
CDHR3-203ENST00000466045 ABCA8O94911 1581 aa12.19□□□□□ -0.46
CDHR3-203ENST00000466045 HFM1A2PYH4 1435 aa12.19□□□□□ -0.46
CDHR3-203ENST00000466045 GOLGA6L3A6NEY3 463 aa12.19□□□□□ -0.46
CDHR3-203ENST00000466045 SLC20A2Q08357 652 aa12.19□□□□□ -0.46
CDHR3-203ENST00000466045 PTPN23Q9H3S7 1636 aa12.19□□□□□ -0.46
CDHR3-203ENST00000466045 ERBB4Q15303 1308 aa12.18□□□□□ -0.46
CDHR3-203ENST00000466045 PLCD3Q8N3E9 789 aa12.18□□□□□ -0.46
CDHR3-203ENST00000466045 ISY1Q9ULR0 285 aaKnown RBP12.18□□□□□ -0.46
CDHR3-203ENST00000466045 KDM5BQ9UGL1 1544 aa12.17□□□□□ -0.46
CDHR3-203ENST00000466045 MMP14P50281 582 aa12.17□□□□□ -0.46
CDHR3-203ENST00000466045 ANP32BQ92688 251 aaKnown RBP12.17□□□□□ -0.46
CDHR3-203ENST00000466045 OFD1O75665 1012 aa12.16□□□□□ -0.46
CDHR3-203ENST00000466045 NUDCQ9Y266 331 aa12.16□□□□□ -0.46
CDHR3-203ENST00000466045 TULP1O00294 542 aaPredicted RBP12.16□□□□□ -0.46
CDHR3-203ENST00000466045 HSP90B1P14625 803 aaKnown RBP12.16□□□□□ -0.46
CDHR3-203ENST00000466045 MAGI3Q5TCQ9 1506 aa12.16□□□□□ -0.46
CDHR3-203ENST00000466045 PTPRKQ15262 1439 aa12.16□□□□□ -0.46
CDHR3-203ENST00000466045 MRE11P49959 708 aa12.15□□□□□ -0.46
CDHR3-203ENST00000466045 TCOF1Q13428 1488 aaKnown RBP12.15□□□□□ -0.46
CDHR3-203ENST00000466045 IRX3P78415 501 aaPredicted RBP12.15□□□□□ -0.46
CDHR3-203ENST00000466045 RAPGEF6Q8TEU7 1601 aa12.15□□□□□ -0.46
CDHR3-203ENST00000466045 VGLL3A8MV65 326 aa12.14□□□□□ -0.47
CDHR3-203ENST00000466045 ATP10BO94823 1461 aa12.14□□□□□ -0.47
CDHR3-203ENST00000466045 NUP153P49790 1475 aaKnown RBP12.14□□□□□ -0.47
CDHR3-203ENST00000466045 NAIPQ13075 1403 aa12.14□□□□□ -0.47
CDHR3-203ENST00000466045 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.14□□□□□ -0.47
CDHR3-203ENST00000466045 ASXL2Q76L83 1435 aa12.14□□□□□ -0.47
CDHR3-203ENST00000466045 GCC2Q8IWJ2 1684 aa12.13□□□□□ -0.47
CDHR3-203ENST00000466045 EPRSP07814 1512 aaKnown RBP12.13□□□□□ -0.47
CDHR3-203ENST00000466045 FAM69CQ0P6D2 419 aa12.13□□□□□ -0.47
CDHR3-203ENST00000466045 CCDC94Q9BW85 323 aaPredicted RBP12.13□□□□□ -0.47
CDHR3-203ENST00000466045 PANK2Q9BZ23 570 aa12.13□□□□□ -0.47
CDHR3-203ENST00000466045 MYH16Q9H6N6 1097 aa12.12□□□□□ -0.47
CDHR3-203ENST00000466045 SLC4A3P48751 1232 aa12.11□□□□□ -0.47
CDHR3-203ENST00000466045 PLEKHD1A6NEE1 506 aa12.11□□□□□ -0.47
CDHR3-203ENST00000466045 DYNC1I1O14576 645 aa12.11□□□□□ -0.47
CDHR3-203ENST00000466045 ZCCHC11Q5TAX3 1644 aaKnown RBP12.11□□□□□ -0.47
CDHR3-203ENST00000466045 MIA2Q96PC5 1412 aa12.1□□□□□ -0.47
CDHR3-203ENST00000466045 HAP1P54257 671 aaPredicted RBP12.1□□□□□ -0.47
CDHR3-203ENST00000466045 FAM13BQ9NYF5 915 aa12.1□□□□□ -0.47
CDHR3-203ENST00000466045 ABCC10Q5T3U5 1492 aa12.09□□□□□ -0.47
CDHR3-203ENST00000466045 PRDM10Q9NQV6 1147 aa12.09□□□□□ -0.47
CDHR3-203ENST00000466045 WDR7Q9Y4E6 1490 aa12.08□□□□□ -0.48
CDHR3-203ENST00000466045 CLGNO14967 610 aa12.08□□□□□ -0.48
CDHR3-203ENST00000466045 CDK11BP21127 795 aaKnown RBP12.08□□□□□ -0.48
CDHR3-203ENST00000466045 TRIM44Q96DX7 344 aaPredicted RBP12.07□□□□□ -0.48
CDHR3-203ENST00000466045 CDK13Q14004 1512 aaKnown RBP12.07□□□□□ -0.48
CDHR3-203ENST00000466045 VIRMAQ69YN4 1812 aaKnown RBP12.07□□□□□ -0.48
CDHR3-203ENST00000466045 TONSLQ96HA7 1378 aa12.06□□□□□ -0.48
CDHR3-203ENST00000466045 DNTTIP2Q5QJE6 756 aaKnown RBP12.05□□□□□ -0.48
CDHR3-203ENST00000466045 CNTLNQ9NXG0 1405 aa12.05□□□□□ -0.48
CDHR3-203ENST00000466045 CNPY4Q8N129 248 aa12.04□□□□□ -0.48
CDHR3-203ENST00000466045 GRPEL1Q9HAV7 217 aa12.04□□□□□ -0.48
CDHR3-203ENST00000466045 KCNG1Q9UIX4 513 aa12.04□□□□□ -0.48
CDHR3-203ENST00000466045 PSEN1P49768 467 aa12.03□□□□□ -0.48
CDHR3-203ENST00000466045 CCDC184Q52MB2 194 aa12.03□□□□□ -0.48
CDHR3-203ENST00000466045 ZSCAN30Q86W11 494 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms