RNA–Protein interactions for RNA: ENST00000465858.1

TFAP2A-207, Transcript of transcription factor AP-2 alpha, humanhuman

TSL 3

Gene TFAP2A, Length 617 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAP2A-207ENST00000465858 DHX29Q7Z478 1369 aaKnown RBP32.08■■■□□ 2.73
TFAP2A-207ENST00000465858 TNRQ92752 1358 aa32.03■■■□□ 2.72
TFAP2A-207ENST00000465858 KIF3BO15066 747 aa32.02■■■□□ 2.72
TFAP2A-207ENST00000465858 SCAF1Q9H7N4 1312 aaKnown RBP32■■■□□ 2.71
TFAP2A-207ENST00000465858 POLR1AO95602 1720 aaPredicted RBP32■■■□□ 2.71
TFAP2A-207ENST00000465858 FBXO31Q5XUX0 539 aaPredicted RBP32■■■□□ 2.71
TFAP2A-207ENST00000465858 MAP3K1Q13233 1512 aa31.99■■■□□ 2.71
TFAP2A-207ENST00000465858 CPS1P31327 1500 aa31.98■■■□□ 2.71
TFAP2A-207ENST00000465858 PZPP20742 1482 aa31.97■■■□□ 2.71
TFAP2A-207ENST00000465858 KDM5DQ9BY66 1539 aa31.97■■■□□ 2.71
TFAP2A-207ENST00000465858 FAM135AQ9P2D6 1515 aa31.97■■■□□ 2.71
TFAP2A-207ENST00000465858 TOM1O60784 492 aa31.97■■■□□ 2.71
TFAP2A-207ENST00000465858 LRRC9Q6ZRR7 1453 aa31.97■■■□□ 2.71
TFAP2A-207ENST00000465858 PIP4K2BP78356 416 aa31.96■■■□□ 2.71
TFAP2A-207ENST00000465858 NEURL4Q96JN8 1562 aa31.96■■■□□ 2.71
TFAP2A-207ENST00000465858 NCOA2Q15596 1464 aa31.96■■■□□ 2.71
TFAP2A-207ENST00000465858 CCDC141Q6ZP82 1450 aa31.95■■■□□ 2.7
TFAP2A-207ENST00000465858 SHANK2Q9UPX8 1470 aa31.95■■■□□ 2.7
TFAP2A-207ENST00000465858 HSPA1LP34931 641 aa31.94■■■□□ 2.7
TFAP2A-207ENST00000465858 WASHC2CQ9Y4E1 1318 aa31.94■■■□□ 2.7
TFAP2A-207ENST00000465858 KANK4Q5T7N3 995 aaPredicted RBP31.93■■■□□ 2.7
TFAP2A-207ENST00000465858 RSPH4AQ5TD94 716 aa31.93■■■□□ 2.7
TFAP2A-207ENST00000465858 ANKLE2Q86XL3 938 aa31.93■■■□□ 2.7
TFAP2A-207ENST00000465858 THEMISQ8N1K5 641 aaPredicted RBP31.91■■■□□ 2.7
TFAP2A-207ENST00000465858 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.9■■■□□ 2.7
TFAP2A-207ENST00000465858 CAMSAP2Q08AD1 1489 aa31.89■■■□□ 2.7
TFAP2A-207ENST00000465858 MIA2Q96PC5 1412 aa31.88■■■□□ 2.69
TFAP2A-207ENST00000465858 NLRP1Q9C000 1473 aa31.86■■■□□ 2.69
TFAP2A-207ENST00000465858 MED1Q15648 1581 aaPredicted RBP31.85■■■□□ 2.69
TFAP2A-207ENST00000465858 UGGT1Q9NYU2 1555 aa31.84■■■□□ 2.69
TFAP2A-207ENST00000465858 VWDEQ8N2E2 1590 aa31.82■■■□□ 2.68
TFAP2A-207ENST00000465858 NPHP4O75161 1426 aaPredicted RBP31.82■■■□□ 2.68
TFAP2A-207ENST00000465858 TSPY4P0CV99 314 aa31.81■■■□□ 2.68
TFAP2A-207ENST00000465858 TSPY10P0CW01 314 aa31.81■■■□□ 2.68
TFAP2A-207ENST00000465858 MED14O60244 1454 aa31.8■■■□□ 2.68
TFAP2A-207ENST00000465858 DEPDC5O75140 1603 aa31.8■■■□□ 2.68
TFAP2A-207ENST00000465858 ARHGEF5Q12774 1597 aa31.78■■■□□ 2.68
TFAP2A-207ENST00000465858 IQGAP1P46940 1657 aa31.73■■■□□ 2.67
TFAP2A-207ENST00000465858 PHF23Q9BUL5 403 aaPredicted RBP31.7■■■□□ 2.67
TFAP2A-207ENST00000465858 RNF17Q9BXT8 1623 aaKnown RBP31.7■■■□□ 2.66
TFAP2A-207ENST00000465858 ALKQ9UM73 1620 aa31.68■■■□□ 2.66
TFAP2A-207ENST00000465858 ABCC3O15438 1527 aa31.68■■■□□ 2.66
TFAP2A-207ENST00000465858 ZC3H13Q5T200 1668 aaKnown RBP31.67■■■□□ 2.66
TFAP2A-207ENST00000465858 MYOM3Q5VTT5 1437 aa31.65■■■□□ 2.66
TFAP2A-207ENST00000465858 ERVK-7P63135 1459 aa31.64■■■□□ 2.66
TFAP2A-207ENST00000465858 LRRC7Q96NW7 1537 aa31.64■■■□□ 2.66
TFAP2A-207ENST00000465858 MAST1Q9Y2H9 1570 aa31.63■■■□□ 2.65
TFAP2A-207ENST00000465858 STRCP1A6NGW2 1772 aa31.62■■■□□ 2.65
TFAP2A-207ENST00000465858 EIF2AK4Q9P2K8 1649 aaKnown RBP31.6■■■□□ 2.65
TFAP2A-207ENST00000465858 SYNMO15061 1565 aa31.6■■■□□ 2.65
TFAP2A-207ENST00000465858 SENP3Q9H4L4 574 aaPredicted RBP31.58■■■□□ 2.65
TFAP2A-207ENST00000465858 CFAP65Q6ZU64 1925 aaKnown RBP31.55■■■□□ 2.64
TFAP2A-207ENST00000465858 MROH1Q8NDA8 1641 aa31.54■■■□□ 2.64
TFAP2A-207ENST00000465858 UBR1Q8IWV7 1749 aa31.54■■■□□ 2.64
TFAP2A-207ENST00000465858 SCAF11Q99590 1463 aaKnown RBP31.53■■■□□ 2.64
TFAP2A-207ENST00000465858 CEP152O94986 1710 aa31.53■■■□□ 2.64
TFAP2A-207ENST00000465858 APLP2Q06481 763 aa31.5■■■□□ 2.63
TFAP2A-207ENST00000465858 DUOX2Q9NRD8 1548 aa31.49■■■□□ 2.63
TFAP2A-207ENST00000465858 TXNDC2Q86VQ3 553 aa31.48■■■□□ 2.63
TFAP2A-207ENST00000465858 PTPN23Q9H3S7 1636 aa31.46■■■□□ 2.63
TFAP2A-207ENST00000465858 LTKP29376 864 aa31.46■■■□□ 2.63
TFAP2A-207ENST00000465858 ARHGAP23Q9P227 1491 aa31.46■■■□□ 2.63
TFAP2A-207ENST00000465858 SLIT1O75093 1534 aa31.45■■■□□ 2.63
TFAP2A-207ENST00000465858 FGD6Q6ZV73 1430 aa31.45■■■□□ 2.63
TFAP2A-207ENST00000465858 EID1Q9Y6B2 187 aa31.44■■■□□ 2.62
TFAP2A-207ENST00000465858 ARHGAP31Q2M1Z3 1444 aa31.42■■■□□ 2.62
TFAP2A-207ENST00000465858 ABCC5O15440 1437 aa31.4■■■□□ 2.62
TFAP2A-207ENST00000465858 KIF15Q9NS87 1388 aa31.39■■■□□ 2.62
TFAP2A-207ENST00000465858 PRDM15P57071 1507 aaPredicted RBP31.39■■■□□ 2.61
TFAP2A-207ENST00000465858 CROCC2H7BZ55 1655 aa31.38■■■□□ 2.61
TFAP2A-207ENST00000465858 XIRP1Q702N8 1843 aaKnown RBP31.36■■■□□ 2.61
TFAP2A-207ENST00000465858 ERBINQ96RT1 1412 aa31.36■■■□□ 2.61
TFAP2A-207ENST00000465858 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.34■■■□□ 2.61
TFAP2A-207ENST00000465858 RRP7BPQ9NSQ0 103 aa31.34■■■□□ 2.61
TFAP2A-207ENST00000465858 STAG3Q9UJ98 1225 aa31.34■■■□□ 2.61
TFAP2A-207ENST00000465858 TMEM2Q9UHN6 1383 aa31.32■■■□□ 2.6
TFAP2A-207ENST00000465858 PIK3C2BO00750 1634 aa31.32■■■□□ 2.6
TFAP2A-207ENST00000465858 RGS17Q9UGC6 210 aaPredicted RBP31.32■■■□□ 2.6
TFAP2A-207ENST00000465858 KANK1Q14678 1352 aa31.31■■■□□ 2.6
TFAP2A-207ENST00000465858 DAPK1P53355 1430 aa31.31■■■□□ 2.6
TFAP2A-207ENST00000465858 FAM135BQ49AJ0 1406 aa31.31■■■□□ 2.6
TFAP2A-207ENST00000465858 TMEM94Q12767 1356 aa31.26■■■□□ 2.59
TFAP2A-207ENST00000465858 EFCAB6Q5THR3 1501 aa31.25■■■□□ 2.59
TFAP2A-207ENST00000465858 KCNA6P17658 529 aa31.24■■■□□ 2.59
TFAP2A-207ENST00000465858 KDM5AP29375 1690 aaKnown RBP31.24■■■□□ 2.59
TFAP2A-207ENST00000465858 IDI1Q13907 227 aa31.23■■■□□ 2.59
TFAP2A-207ENST00000465858 PROSER2Q86WR7 435 aaPredicted RBP31.21■■■□□ 2.59
TFAP2A-207ENST00000465858 LMTK2Q8IWU2 1503 aa31.19■■■□□ 2.58
TFAP2A-207ENST00000465858 SLC26A8Q96RN1 970 aa31.18■■■□□ 2.58
TFAP2A-207ENST00000465858 TET3O43151 1660 aa31.16■■■□□ 2.58
TFAP2A-207ENST00000465858 PPARGC1BQ86YN6 1023 aaKnown RBP31.16■■■□□ 2.58
TFAP2A-207ENST00000465858 ANKRD30AQ9BXX3 1397 aa31.16■■■□□ 2.58
TFAP2A-207ENST00000465858 ROBO1Q9Y6N7 1651 aa31.16■■■□□ 2.58
TFAP2A-207ENST00000465858 POTEAQ6S8J7 498 aa31.14■■■□□ 2.58
TFAP2A-207ENST00000465858 ADGRL2O95490 1459 aa31.14■■■□□ 2.57
TFAP2A-207ENST00000465858 RBM33Q96EV2 1170 aaKnown RBP31.13■■■□□ 2.57
TFAP2A-207ENST00000465858 CHIC2Q9UKJ5 165 aa31.13■■■□□ 2.57
TFAP2A-207ENST00000465858 ADGRB3O60242 1522 aa31.11■■■□□ 2.57
TFAP2A-207ENST00000465858 NOS1P29475 1434 aa31.11■■■□□ 2.57
TFAP2A-207ENST00000465858 NKTRP30414 1462 aaKnown RBP31.11■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms