RNA–Protein interactions for RNA: ENST00000465528.1

NOTCH4-202, Transcript of notch 4, humanhuman

TSL 5

Gene NOTCH4, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-202ENST00000465528 UBAP1LF5GYI3 381 aa20.48■□□□□ 0.87
NOTCH4-202ENST00000465528 RSPH4AQ5TD94 716 aa20.48■□□□□ 0.87
NOTCH4-202ENST00000465528 DNMT1P26358 1616 aaKnown RBP20.48■□□□□ 0.87
NOTCH4-202ENST00000465528 TNRQ92752 1358 aa20.46■□□□□ 0.87
NOTCH4-202ENST00000465528 WASHC2CQ9Y4E1 1318 aa20.45■□□□□ 0.86
NOTCH4-202ENST00000465528 PZPP20742 1482 aa20.44■□□□□ 0.86
NOTCH4-202ENST00000465528 SOCS7O14512 581 aa20.44■□□□□ 0.86
NOTCH4-202ENST00000465528 SPATA31D1Q6ZQQ2 1576 aa20.43■□□□□ 0.86
NOTCH4-202ENST00000465528 KDM5DQ9BY66 1539 aa20.43■□□□□ 0.86
NOTCH4-202ENST00000465528 LOC105371045A0A1W2PR82 267 aa20.41■□□□□ 0.86
NOTCH4-202ENST00000465528 TSPY4P0CV99 314 aa20.41■□□□□ 0.86
NOTCH4-202ENST00000465528 TSPY10P0CW01 314 aa20.41■□□□□ 0.86
NOTCH4-202ENST00000465528 MIA2Q96PC5 1412 aa20.41■□□□□ 0.86
NOTCH4-202ENST00000465528 ARHGEF5Q12774 1597 aa20.4■□□□□ 0.86
NOTCH4-202ENST00000465528 NEURL4Q96JN8 1562 aa20.4■□□□□ 0.86
NOTCH4-202ENST00000465528 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.4■□□□□ 0.86
NOTCH4-202ENST00000465528 FAM135AQ9P2D6 1515 aa20.39■□□□□ 0.85
NOTCH4-202ENST00000465528 LRRC9Q6ZRR7 1453 aa20.38■□□□□ 0.85
NOTCH4-202ENST00000465528 KANK4Q5T7N3 995 aaPredicted RBP20.38■□□□□ 0.85
NOTCH4-202ENST00000465528 ANKLE2Q86XL3 938 aa20.37■□□□□ 0.85
NOTCH4-202ENST00000465528 THEMISQ8N1K5 641 aaPredicted RBP20.36■□□□□ 0.85
NOTCH4-202ENST00000465528 VPS8Q8N3P4 1428 aa20.36■□□□□ 0.85
NOTCH4-202ENST00000465528 NLRP1Q9C000 1473 aa20.34■□□□□ 0.85
NOTCH4-202ENST00000465528 SHANK2Q9UPX8 1470 aa20.34■□□□□ 0.85
NOTCH4-202ENST00000465528 POLR1AO95602 1720 aaPredicted RBP20.33■□□□□ 0.84
NOTCH4-202ENST00000465528 UGGT1Q9NYU2 1555 aa20.32■□□□□ 0.84
NOTCH4-202ENST00000465528 HSPA1LP34931 641 aa20.31■□□□□ 0.84
NOTCH4-202ENST00000465528 CPS1P31327 1500 aa20.31■□□□□ 0.84
NOTCH4-202ENST00000465528 MED14O60244 1454 aa20.3■□□□□ 0.84
NOTCH4-202ENST00000465528 MAST1Q9Y2H9 1570 aa20.3■□□□□ 0.84
NOTCH4-202ENST00000465528 NPHP4O75161 1426 aaPredicted RBP20.3■□□□□ 0.84
NOTCH4-202ENST00000465528 PIP4K2BP78356 416 aa20.3■□□□□ 0.84
NOTCH4-202ENST00000465528 ABCC3O15438 1527 aa20.3■□□□□ 0.84
NOTCH4-202ENST00000465528 RNF17Q9BXT8 1623 aaKnown RBP20.3■□□□□ 0.84
NOTCH4-202ENST00000465528 VWDEQ8N2E2 1590 aa20.29■□□□□ 0.84
NOTCH4-202ENST00000465528 SCAF1Q9H7N4 1312 aaKnown RBP20.28■□□□□ 0.84
NOTCH4-202ENST00000465528 TOM1O60784 492 aa20.28■□□□□ 0.84
NOTCH4-202ENST00000465528 MROH1Q8NDA8 1641 aa20.27■□□□□ 0.83
NOTCH4-202ENST00000465528 MYOM3Q5VTT5 1437 aa20.27■□□□□ 0.83
NOTCH4-202ENST00000465528 ERVK-7P63135 1459 aa20.26■□□□□ 0.83
NOTCH4-202ENST00000465528 DEPDC5O75140 1603 aa20.26■□□□□ 0.83
NOTCH4-202ENST00000465528 MAP3K1Q13233 1512 aa20.26■□□□□ 0.83
NOTCH4-202ENST00000465528 EIF2AK4Q9P2K8 1649 aaKnown RBP20.23■□□□□ 0.83
NOTCH4-202ENST00000465528 ALKQ9UM73 1620 aa20.23■□□□□ 0.83
NOTCH4-202ENST00000465528 ZC3H13Q5T200 1668 aaKnown RBP20.21■□□□□ 0.83
NOTCH4-202ENST00000465528 CFAP65Q6ZU64 1925 aaKnown RBP20.21■□□□□ 0.83
NOTCH4-202ENST00000465528 DUOX2Q9NRD8 1548 aa20.2■□□□□ 0.82
NOTCH4-202ENST00000465528 IQGAP1P46940 1657 aa20.19■□□□□ 0.82
NOTCH4-202ENST00000465528 ABCC5O15440 1437 aa20.19■□□□□ 0.82
NOTCH4-202ENST00000465528 STRCP1A6NGW2 1772 aa20.19■□□□□ 0.82
NOTCH4-202ENST00000465528 LTKP29376 864 aa20.19■□□□□ 0.82
NOTCH4-202ENST00000465528 RRP7BPQ9NSQ0 103 aa20.19■□□□□ 0.82
NOTCH4-202ENST00000465528 CEP152O94986 1710 aa20.19■□□□□ 0.82
NOTCH4-202ENST00000465528 KIF15Q9NS87 1388 aa20.18■□□□□ 0.82
NOTCH4-202ENST00000465528 LRRC7Q96NW7 1537 aa20.17■□□□□ 0.82
NOTCH4-202ENST00000465528 ARHGAP31Q2M1Z3 1444 aa20.15■□□□□ 0.82
NOTCH4-202ENST00000465528 MED1Q15648 1581 aaPredicted RBP20.15■□□□□ 0.82
NOTCH4-202ENST00000465528 UBR1Q8IWV7 1749 aa20.15■□□□□ 0.82
NOTCH4-202ENST00000465528 TXNDC2Q86VQ3 553 aa20.14■□□□□ 0.81
NOTCH4-202ENST00000465528 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.14■□□□□ 0.81
NOTCH4-202ENST00000465528 SCAF11Q99590 1463 aaKnown RBP20.13■□□□□ 0.81
NOTCH4-202ENST00000465528 ARHGAP23Q9P227 1491 aa20.13■□□□□ 0.81
NOTCH4-202ENST00000465528 PRDM15P57071 1507 aaPredicted RBP20.12■□□□□ 0.81
NOTCH4-202ENST00000465528 ERBINQ96RT1 1412 aa20.12■□□□□ 0.81
NOTCH4-202ENST00000465528 SLIT1O75093 1534 aa20.12■□□□□ 0.81
NOTCH4-202ENST00000465528 PTPN23Q9H3S7 1636 aa20.11■□□□□ 0.81
NOTCH4-202ENST00000465528 DAPK1P53355 1430 aa20.1■□□□□ 0.81
NOTCH4-202ENST00000465528 SENP3Q9H4L4 574 aaPredicted RBP20.1■□□□□ 0.81
NOTCH4-202ENST00000465528 CHIC2Q9UKJ5 165 aa20.09■□□□□ 0.81
NOTCH4-202ENST00000465528 CROCC2H7BZ55 1655 aa20.08■□□□□ 0.81
NOTCH4-202ENST00000465528 FGD6Q6ZV73 1430 aa20.08■□□□□ 0.8
NOTCH4-202ENST00000465528 IDI1Q13907 227 aa20.07■□□□□ 0.8
NOTCH4-202ENST00000465528 SYNMO15061 1565 aa20.06■□□□□ 0.8
NOTCH4-202ENST00000465528 APLP2Q06481 763 aa20.06■□□□□ 0.8
NOTCH4-202ENST00000465528 TMEM2Q9UHN6 1383 aa20.06■□□□□ 0.8
NOTCH4-202ENST00000465528 EID1Q9Y6B2 187 aa20.05■□□□□ 0.8
NOTCH4-202ENST00000465528 PIK3C2BO00750 1634 aa20.04■□□□□ 0.8
NOTCH4-202ENST00000465528 KANK1Q14678 1352 aa20.04■□□□□ 0.8
NOTCH4-202ENST00000465528 ANKRD30AQ9BXX3 1397 aa20.03■□□□□ 0.8
NOTCH4-202ENST00000465528 STAG3Q9UJ98 1225 aa20.02■□□□□ 0.8
NOTCH4-202ENST00000465528 LMTK2Q8IWU2 1503 aa20.02■□□□□ 0.79
NOTCH4-202ENST00000465528 PHF23Q9BUL5 403 aaPredicted RBP20.01■□□□□ 0.79
NOTCH4-202ENST00000465528 XIRP1Q702N8 1843 aaKnown RBP20■□□□□ 0.79
NOTCH4-202ENST00000465528 NOS1P29475 1434 aa19.99■□□□□ 0.79
NOTCH4-202ENST00000465528 EFCAB6Q5THR3 1501 aa19.98■□□□□ 0.79
NOTCH4-202ENST00000465528 KCNA6P17658 529 aa19.97■□□□□ 0.79
NOTCH4-202ENST00000465528 SLC26A8Q96RN1 970 aa19.97■□□□□ 0.79
NOTCH4-202ENST00000465528 TMEM94Q12767 1356 aa19.96■□□□□ 0.79
NOTCH4-202ENST00000465528 RBM33Q96EV2 1170 aaKnown RBP19.96■□□□□ 0.79
NOTCH4-202ENST00000465528 TET3O43151 1660 aa19.96■□□□□ 0.79
NOTCH4-202ENST00000465528 RGS17Q9UGC6 210 aaPredicted RBP19.95■□□□□ 0.78
NOTCH4-202ENST00000465528 ADGRL2O95490 1459 aa19.94■□□□□ 0.78
NOTCH4-202ENST00000465528 KDM5AP29375 1690 aaKnown RBP19.94■□□□□ 0.78
NOTCH4-202ENST00000465528 FAM135BQ49AJ0 1406 aa19.93■□□□□ 0.78
NOTCH4-202ENST00000465528 FAM50AQ14320 339 aaKnown RBP19.92■□□□□ 0.78
NOTCH4-202ENST00000465528 PROSER2Q86WR7 435 aaPredicted RBP19.92■□□□□ 0.78
NOTCH4-202ENST00000465528 SLC52A1Q9NWF4 448 aa19.92■□□□□ 0.78
NOTCH4-202ENST00000465528 ADGRB3O60242 1522 aa19.9■□□□□ 0.78
NOTCH4-202ENST00000465528 ANKRD50Q9ULJ7 1429 aa19.89■□□□□ 0.77
NOTCH4-202ENST00000465528 ZFYVE9O95405 1425 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms