RNA–Protein interactions for RNA: ENST00000465408.1

UBE4B-205, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 355 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-205ENST00000465408 CCDC18Q5T9S5 1454 aa12.36□□□□□ -0.43
UBE4B-205ENST00000465408 MYT1LQ9UL68 1186 aa12.36□□□□□ -0.43
UBE4B-205ENST00000465408 CDK13Q14004 1512 aaKnown RBP12.36□□□□□ -0.43
UBE4B-205ENST00000465408 EHBP1L1Q8N3D4 1523 aa12.36□□□□□ -0.43
UBE4B-205ENST00000465408 PLEKHD1A6NEE1 506 aa12.35□□□□□ -0.43
UBE4B-205ENST00000465408 ZRANB1Q9UGI0 708 aa12.35□□□□□ -0.43
UBE4B-205ENST00000465408 SYNMO15061 1565 aa12.35□□□□□ -0.43
UBE4B-205ENST00000465408 A2ML1A8K2U0 1454 aa12.34□□□□□ -0.43
UBE4B-205ENST00000465408 FAM135BQ49AJ0 1406 aa12.34□□□□□ -0.43
UBE4B-205ENST00000465408 NCOA2Q15596 1464 aa12.34□□□□□ -0.43
UBE4B-205ENST00000465408 FGD6Q6ZV73 1430 aa12.32□□□□□ -0.44
UBE4B-205ENST00000465408 ZNF772Q68DY9 489 aaPredicted RBP12.31□□□□□ -0.44
UBE4B-205ENST00000465408 CDK12Q9NYV4 1490 aaPredicted RBP12.31□□□□□ -0.44
UBE4B-205ENST00000465408 CLTCQ00610 1675 aaKnown RBP12.31□□□□□ -0.44
UBE4B-205ENST00000465408 LRP6O75581 1613 aa12.3□□□□□ -0.44
UBE4B-205ENST00000465408 MLH3Q9UHC1 1453 aa12.3□□□□□ -0.44
UBE4B-205ENST00000465408 RXRBP28702 533 aa12.3□□□□□ -0.44
UBE4B-205ENST00000465408 DHX57Q6P158 1386 aaKnown RBP12.3□□□□□ -0.44
UBE4B-205ENST00000465408 NPHP4O75161 1426 aaPredicted RBP12.29□□□□□ -0.44
UBE4B-205ENST00000465408 MYOM3Q5VTT5 1437 aa12.29□□□□□ -0.44
UBE4B-205ENST00000465408 EFCAB2Q5VUJ9 269 aa12.28□□□□□ -0.44
UBE4B-205ENST00000465408 RAB3GAP2Q9H2M9 1393 aa12.28□□□□□ -0.44
UBE4B-205ENST00000465408 MED14O60244 1454 aa12.27□□□□□ -0.44
UBE4B-205ENST00000465408 ROBO1Q9Y6N7 1651 aa12.27□□□□□ -0.45
UBE4B-205ENST00000465408 ANKLE2Q86XL3 938 aa12.27□□□□□ -0.45
UBE4B-205ENST00000465408 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.27□□□□□ -0.45
UBE4B-205ENST00000465408 XIRP1Q702N8 1843 aaKnown RBP12.26□□□□□ -0.45
UBE4B-205ENST00000465408 SETD5Q9C0A6 1442 aa12.26□□□□□ -0.45
UBE4B-205ENST00000465408 JCADQ9P266 1359 aa12.25□□□□□ -0.45
UBE4B-205ENST00000465408 RGS12O14924 1447 aa12.25□□□□□ -0.45
UBE4B-205ENST00000465408 IQGAP1P46940 1657 aa12.25□□□□□ -0.45
UBE4B-205ENST00000465408 DEPDC5O75140 1603 aa12.24□□□□□ -0.45
UBE4B-205ENST00000465408 MYO5CQ9NQX4 1742 aa12.23□□□□□ -0.45
UBE4B-205ENST00000465408 ABCC1P33527 1531 aa12.23□□□□□ -0.45
UBE4B-205ENST00000465408 FOXD1Q16676 465 aa12.23□□□□□ -0.45
UBE4B-205ENST00000465408 KIDINS220Q9ULH0 1771 aa12.23□□□□□ -0.45
UBE4B-205ENST00000465408 PTPN23Q9H3S7 1636 aa12.22□□□□□ -0.45
UBE4B-205ENST00000465408 MEX3CQ5U5Q3 659 aaKnown RBP12.22□□□□□ -0.45
UBE4B-205ENST00000465408 ITSN2Q9NZM3 1697 aa12.22□□□□□ -0.45
UBE4B-205ENST00000465408 LRP5O75197 1615 aa12.22□□□□□ -0.45
UBE4B-205ENST00000465408 NUTM2BA6NNL0 878 aaPredicted RBP12.2□□□□□ -0.46
UBE4B-205ENST00000465408 NUTM2EB1AL46 878 aaPredicted RBP12.2□□□□□ -0.46
UBE4B-205ENST00000465408 NUTM2DQ5VT03 806 aaPredicted RBP12.2□□□□□ -0.46
UBE4B-205ENST00000465408 NUTM2AQ8IVF1 878 aaPredicted RBP12.2□□□□□ -0.46
UBE4B-205ENST00000465408 CDK11AQ9UQ88 783 aaPredicted RBP12.2□□□□□ -0.46
UBE4B-205ENST00000465408 PHLPP1O60346 1717 aa12.2□□□□□ -0.46
UBE4B-205ENST00000465408 TROQ12816 1431 aaPredicted RBP12.2□□□□□ -0.46
UBE4B-205ENST00000465408 CLSPNQ9HAW4 1339 aa12.18□□□□□ -0.46
UBE4B-205ENST00000465408 ARHGAP5Q13017 1502 aa12.18□□□□□ -0.46
UBE4B-205ENST00000465408 YY1P25490 414 aa12.17□□□□□ -0.46
UBE4B-205ENST00000465408 MIA2Q96PC5 1412 aa12.17□□□□□ -0.46
UBE4B-205ENST00000465408 TNRQ92752 1358 aa12.17□□□□□ -0.46
UBE4B-205ENST00000465408 EP400Q96L91 3159 aa12.16□□□□□ -0.46
UBE4B-205ENST00000465408 SPATA31A6Q5VVP1 1343 aa12.16□□□□□ -0.46
UBE4B-205ENST00000465408 COL16A1Q07092 1604 aaPredicted RBP12.15□□□□□ -0.46
UBE4B-205ENST00000465408 FBXO31Q5XUX0 539 aaPredicted RBP12.15□□□□□ -0.46
UBE4B-205ENST00000465408 ZC3H13Q5T200 1668 aaKnown RBP12.15□□□□□ -0.46
UBE4B-205ENST00000465408 ATAD2Q6PL18 1390 aa12.15□□□□□ -0.46
UBE4B-205ENST00000465408 KIF14Q15058 1648 aa12.15□□□□□ -0.47
UBE4B-205ENST00000465408 HFM1A2PYH4 1435 aa12.14□□□□□ -0.47
UBE4B-205ENST00000465408 THEMISQ8N1K5 641 aaPredicted RBP12.14□□□□□ -0.47
UBE4B-205ENST00000465408 CHIC2Q9UKJ5 165 aa12.14□□□□□ -0.47
UBE4B-205ENST00000465408 NAIPQ13075 1403 aa12.13□□□□□ -0.47
UBE4B-205ENST00000465408 GGT6Q6P531 493 aa12.13□□□□□ -0.47
UBE4B-205ENST00000465408 UGGT1Q9NYU2 1555 aa12.13□□□□□ -0.47
UBE4B-205ENST00000465408 ZNF644Q9H582 1327 aaPredicted RBP12.12□□□□□ -0.47
UBE4B-205ENST00000465408 KDM5DQ9BY66 1539 aa12.12□□□□□ -0.47
UBE4B-205ENST00000465408 RRP7BPQ9NSQ0 103 aa12.12□□□□□ -0.47
UBE4B-205ENST00000465408 AFF2P51816 1311 aa12.11□□□□□ -0.47
UBE4B-205ENST00000465408 FAM135AQ9P2D6 1515 aa12.11□□□□□ -0.47
UBE4B-205ENST00000465408 GPATCH8Q9UKJ3 1502 aaKnown RBP12.11□□□□□ -0.47
UBE4B-205ENST00000465408 PLXNC1O60486 1568 aa12.1□□□□□ -0.47
UBE4B-205ENST00000465408 TMEM94Q12767 1356 aa12.1□□□□□ -0.47
UBE4B-205ENST00000465408 ZNF316A6NFI3 1004 aaPredicted RBP12.1□□□□□ -0.47
UBE4B-205ENST00000465408 SENP3-EIF4A1A0A087X0R7 540 aa12.09□□□□□ -0.47
UBE4B-205ENST00000465408 RBM6P78332 1123 aaKnown RBP12.09□□□□□ -0.47
UBE4B-205ENST00000465408 CFDP1Q9UEE9 299 aaPredicted RBP12.09□□□□□ -0.47
UBE4B-205ENST00000465408 ABCC5O15440 1437 aa12.09□□□□□ -0.47
UBE4B-205ENST00000465408 DAPK1P53355 1430 aa12.09□□□□□ -0.47
UBE4B-205ENST00000465408 CAMSAP2Q08AD1 1489 aa12.08□□□□□ -0.47
UBE4B-205ENST00000465408 ATP7AQ04656 1500 aa12.08□□□□□ -0.48
UBE4B-205ENST00000465408 ZNF777Q9ULD5 760 aaPredicted RBP12.08□□□□□ -0.48
UBE4B-205ENST00000465408 SHPRHQ149N8 1683 aa12.07□□□□□ -0.48
UBE4B-205ENST00000465408 SAMD9LQ8IVG5 1584 aa12.07□□□□□ -0.48
UBE4B-205ENST00000465408 CDC42BPBQ9Y5S2 1711 aa12.07□□□□□ -0.48
UBE4B-205ENST00000465408 SIN3AQ96ST3 1273 aa12.06□□□□□ -0.48
UBE4B-205ENST00000465408 QTRT2Q9H974 415 aaKnown RBP12.06□□□□□ -0.48
UBE4B-205ENST00000465408 NLRP1Q9C000 1473 aa12.06□□□□□ -0.48
UBE4B-205ENST00000465408 GCC2Q8IWJ2 1684 aa12.06□□□□□ -0.48
UBE4B-205ENST00000465408 NHSL1Q5SYE7 1610 aa12.05□□□□□ -0.48
UBE4B-205ENST00000465408 NEUROD1Q13562 356 aa12.05□□□□□ -0.48
UBE4B-205ENST00000465408 A2MP01023 1474 aa12.05□□□□□ -0.48
UBE4B-205ENST00000465408 PZPP20742 1482 aa12.04□□□□□ -0.48
UBE4B-205ENST00000465408 SLAIN2Q9P270 581 aa12.04□□□□□ -0.48
UBE4B-205ENST00000465408 ROCK1Q13464 1354 aa12.03□□□□□ -0.48
UBE4B-205ENST00000465408 DIEXFQ68CQ4 756 aaKnown RBP12.02□□□□□ -0.49
UBE4B-205ENST00000465408 CDC42BPAQ5VT25 1732 aa12.01□□□□□ -0.49
UBE4B-205ENST00000465408 CCDC125Q86Z20 511 aa12.01□□□□□ -0.49
UBE4B-205ENST00000465408 NWD1Q149M9 1564 aa12.01□□□□□ -0.49
UBE4B-205ENST00000465408 SPAG9O60271 1321 aaKnown RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms