RNA–Protein interactions for RNA: ENST00000465379.1

SP3-205, Transcript of Sp3 transcription factor, humanhuman

TSL 1 (best)

Gene SP3, Length 5,489 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP3-205ENST00000465379 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.77□□□□□ -1.657e-11■■■■■ 86.9
SP3-205ENST00000465379 CCDC43Q96MW1 224 aaKnown RBP4.76□□□□□ -1.65
SP3-205ENST00000465379 SMG6Q86US8 1419 aaKnown RBP4.76□□□□□ -1.65
SP3-205ENST00000465379 LMOD1P29536 600 aaPredicted RBP4.76□□□□□ -1.65
SP3-205ENST00000465379 NAP1L2Q9ULW6 460 aaPredicted RBP4.76□□□□□ -1.65
SP3-205ENST00000465379 BAG6P46379 1132 aa4.76□□□□□ -1.65
SP3-205ENST00000465379 KCNJ4P48050 445 aa4.76□□□□□ -1.65
SP3-205ENST00000465379 OS9Q13438 667 aaPredicted RBP4.76□□□□□ -1.65
SP3-205ENST00000465379 MLECQ14165 292 aa4.76□□□□□ -1.65
SP3-205ENST00000465379 CCNB3Q8WWL7 1395 aa4.76□□□□□ -1.65
SP3-205ENST00000465379 KIF4AO95239 1232 aa4.75□□□□□ -1.65
SP3-205ENST00000465379 ZNF772Q68DY9 489 aaPredicted RBP4.75□□□□□ -1.65
SP3-205ENST00000465379 IPO9Q96P70 1041 aaKnown RBP4.75□□□□□ -1.65
SP3-205ENST00000465379 CABP2Q9NPB3 220 aa4.75□□□□□ -1.65
SP3-205ENST00000465379 GTF3C3Q9Y5Q9 886 aa4.75□□□□□ -1.65
SP3-205ENST00000465379 EIF4E1BA6NMX2 242 aaKnown RBP4.75□□□□□ -1.65
SP3-205ENST00000465379 C1orf141Q5JVX7 400 aa4.75□□□□□ -1.65
SP3-205ENST00000465379 PPP4R3BQ5MIZ7 849 aa4.75□□□□□ -1.65
SP3-205ENST00000465379 RPRD2Q5VT52 1461 aaKnown RBP4.74□□□□□ -1.65
SP3-205ENST00000465379 HSP90AA1P07900 732 aaKnown RBP4.74□□□□□ -1.65
SP3-205ENST00000465379 IRX6P78412 446 aaPredicted RBP4.74□□□□□ -1.65
SP3-205ENST00000465379 FAM69CQ0P6D2 419 aa4.74□□□□□ -1.65
SP3-205ENST00000465379 OTUD7BQ6GQQ9 843 aa4.74□□□□□ -1.65
SP3-205ENST00000465379 ANKLE2Q86XL3 938 aa4.74□□□□□ -1.65
SP3-205ENST00000465379 CFDP1Q9UEE9 299 aaPredicted RBP4.74□□□□□ -1.65
SP3-205ENST00000465379 FRAT2O75474 233 aaPredicted RBP4.74□□□□□ -1.65
SP3-205ENST00000465379 ITGAEP38570 1179 aa4.74□□□□□ -1.65
SP3-205ENST00000465379 STAC3Q96MF2 364 aa4.74□□□□□ -1.65
SP3-205ENST00000465379 A0A087WZG4 1122 aa4.74□□□□□ -1.65
SP3-205ENST00000465379 CCDC47Q96A33 483 aaKnown RBP4.74□□□□□ -1.65
SP3-205ENST00000465379 WRNQ14191 1432 aaPredicted RBP eCLIP4.74□□□□□ -1.65
SP3-205ENST00000465379 UTP14AQ9BVJ6 771 aaKnown RBP4.74□□□□□ -1.65
SP3-205ENST00000465379 PRKAG2Q9UGJ0 569 aa4.74□□□□□ -1.65
SP3-205ENST00000465379 HSP90AB1P08238 724 aaKnown RBP4.73□□□□□ -1.65
SP3-205ENST00000465379 CCDC152Q4G0S7 254 aa4.73□□□□□ -1.65
SP3-205ENST00000465379 TTC5Q8N0Z6 440 aa4.73□□□□□ -1.65
SP3-205ENST00000465379 MARCH6O60337 910 aa4.73□□□□□ -1.65
SP3-205ENST00000465379 HNRNPMP52272 730 aaKnown RBP eCLIP4.73□□□□□ -1.65
SP3-205ENST00000465379 NGDNQ8NEJ9 315 aaKnown RBP4.73□□□□□ -1.65
SP3-205ENST00000465379 RWDD1Q9H446 243 aaPredicted RBP4.73□□□□□ -1.65
SP3-205ENST00000465379 TERF2IPQ9NYB0 399 aa4.73□□□□□ -1.65
SP3-205ENST00000465379 GORABQ5T7V8 394 aa4.73□□□□□ -1.65
SP3-205ENST00000465379 KIF3AQ9Y496 699 aa4.73□□□□□ -1.65
SP3-205ENST00000465379 MCCP23508 829 aa4.72□□□□□ -1.65
SP3-205ENST00000465379 APBB1IPQ7Z5R6 666 aaPredicted RBP4.72□□□□□ -1.65
SP3-205ENST00000465379 FERMT2Q96AC1 680 aa4.72□□□□□ -1.65
SP3-205ENST00000465379 PLEKHH2Q8IVE3 1493 aa4.72□□□□□ -1.65
SP3-205ENST00000465379 TPM2P07951 284 aa4.72□□□□□ -1.65
SP3-205ENST00000465379 STK32BQ9NY57 414 aa4.72□□□□□ -1.65
SP3-205ENST00000465379 TPM4P67936 248 aa4.72□□□□□ -1.65
SP3-205ENST00000465379 PAK3O75914 559 aaPredicted RBP4.72□□□□□ -1.65
SP3-205ENST00000465379 SLC3A2P08195 630 aaKnown RBP4.72□□□□□ -1.65
SP3-205ENST00000465379 SCAPERQ9BY12 1400 aa4.72□□□□□ -1.65
SP3-205ENST00000465379 TRAF1Q13077 416 aa4.71□□□□□ -1.65
SP3-205ENST00000465379 CYB5RLQ6IPT4 315 aa4.71□□□□□ -1.65
SP3-205ENST00000465379 AKNAQ7Z591 1439 aa4.71□□□□□ -1.65
SP3-205ENST00000465379 SOGA3Q5TF21 947 aa4.71□□□□□ -1.66
SP3-205ENST00000465379 RBM42Q9BTD8 480 aaKnown RBP4.71□□□□□ -1.66
SP3-205ENST00000465379 EHMT1Q9H9B1 1298 aa4.71□□□□□ -1.66
SP3-205ENST00000465379 ATXN8OSP0DMR3 200 aa4.71□□□□□ -1.66
SP3-205ENST00000465379 SLF2Q8IX21 1173 aa4.71□□□□□ -1.66
SP3-205ENST00000465379 GAS2L2Q8NHY3 880 aa4.71□□□□□ -1.66
SP3-205ENST00000465379 FGD1P98174 961 aa4.71□□□□□ -1.66
SP3-205ENST00000465379 SART3Q15020 963 aaKnown RBP4.71□□□□□ -1.66
SP3-205ENST00000465379 ZNF652Q9Y2D9 606 aa4.71□□□□□ -1.66
SP3-205ENST00000465379 GNL3LQ9NVN8 582 aaKnown RBP4.7□□□□□ -1.66
SP3-205ENST00000465379 CENPJQ9HC77 1338 aaPredicted RBP4.7□□□□□ -1.66
SP3-205ENST00000465379 PDE6BP35913 854 aa4.7□□□□□ -1.66
SP3-205ENST00000465379 ENGASEQ8NFI3 743 aa4.7□□□□□ -1.66
SP3-205ENST00000465379 GNL2Q13823 731 aaKnown RBP4.7□□□□□ -1.66
SP3-205ENST00000465379 RAB11FIP4Q86YS3 637 aa4.7□□□□□ -1.66
SP3-205ENST00000465379 DRC1Q96MC2 740 aa4.7□□□□□ -1.66
SP3-205ENST00000465379 MTIF3Q9H2K0 278 aaKnown RBP4.7□□□□□ -1.66
SP3-205ENST00000465379 ZBTB12Q9Y330 459 aaPredicted RBP4.7□□□□□ -1.66
SP3-205ENST00000465379 FLAD1Q8NFF5 587 aa4.7□□□□□ -1.66
SP3-205ENST00000465379 TNPO1Q92973 898 aaKnown RBP4.7□□□□□ -1.66
SP3-205ENST00000465379 SLC5A4Q9NY91 659 aa4.7□□□□□ -1.66
SP3-205ENST00000465379 MPHOSPH10O00566 681 aaKnown RBP4.69□□□□□ -1.66
SP3-205ENST00000465379 PROSER2Q86WR7 435 aaPredicted RBP4.69□□□□□ -1.66
SP3-205ENST00000465379 MYO1BO43795 1136 aa4.69□□□□□ -1.66
SP3-205ENST00000465379 CDCA7Q9BWT1 371 aaPredicted RBP4.69□□□□□ -1.66
SP3-205ENST00000465379 CADPSQ9ULU8 1353 aa4.69□□□□□ -1.66
SP3-205ENST00000465379 VAMP4O75379 141 aa4.69□□□□□ -1.66
SP3-205ENST00000465379 PPP4R3AQ6IN85 833 aa4.69□□□□□ -1.66
SP3-205ENST00000465379 TONSLQ96HA7 1378 aa4.69□□□□□ -1.66
SP3-205ENST00000465379 UBAP1LF5GYI3 381 aa4.69□□□□□ -1.66
SP3-205ENST00000465379 GOLGA6L22H0YM25 854 aa4.69□□□□□ -1.66
SP3-205ENST00000465379 TCIRG1Q13488 830 aa4.69□□□□□ -1.66
SP3-205ENST00000465379 BRDTQ58F21 947 aaPredicted RBP4.69□□□□□ -1.66
SP3-205ENST00000465379 ORC3Q9UBD5 711 aaPredicted RBP4.69□□□□□ -1.66
SP3-205ENST00000465379 BAZ1AQ9NRL2 1556 aaPredicted RBP4.69□□□□□ -1.66
SP3-205ENST00000465379 VPS37DQ86XT2 251 aa4.69□□□□□ -1.66
SP3-205ENST00000465379 FTSJ3Q8IY81 847 aaKnown RBP4.69□□□□□ -1.66
SP3-205ENST00000465379 PAF1Q8N7H5 531 aa4.69□□□□□ -1.66
SP3-205ENST00000465379 HDAC9Q9UKV0 1011 aa4.69□□□□□ -1.66
SP3-205ENST00000465379 IFT140Q96RY7 1462 aa4.68□□□□□ -1.66
SP3-205ENST00000465379 TTLL12Q14166 644 aaPredicted RBP4.68□□□□□ -1.66
SP3-205ENST00000465379 LRRC45Q96CN5 670 aa4.68□□□□□ -1.66
SP3-205ENST00000465379 DNAJC2Q99543 621 aaKnown RBP4.68□□□□□ -1.66
SP3-205ENST00000465379 FEZ1Q99689 392 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms