RNA–Protein interactions for RNA: ENST00000465352.1

ABCA4-203, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 5

Gene ABCA4, Length 1,048 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-203ENST00000465352 KDM5DQ9BY66 1539 aa22.3■■□□□ 1.16
ABCA4-203ENST00000465352 CAMSAP1Q5T5Y3 1602 aa22.28■■□□□ 1.16
ABCA4-203ENST00000465352 MYO3AQ8NEV4 1616 aa22.27■■□□□ 1.16
ABCA4-203ENST00000465352 ZNF142P52746 1687 aaPredicted RBP22.26■■□□□ 1.15
ABCA4-203ENST00000465352 CEP170BQ9Y4F5 1589 aaPredicted RBP22.25■■□□□ 1.15
ABCA4-203ENST00000465352 PTPN23Q9H3S7 1636 aa22.25■■□□□ 1.15
ABCA4-203ENST00000465352 PKD2Q13563 968 aa22.25■■□□□ 1.15
ABCA4-203ENST00000465352 PZPP20742 1482 aa22.25■■□□□ 1.15
ABCA4-203ENST00000465352 TNRQ92752 1358 aa22.25■■□□□ 1.15
ABCA4-203ENST00000465352 FGD6Q6ZV73 1430 aa22.23■■□□□ 1.15
ABCA4-203ENST00000465352 FBXO31Q5XUX0 539 aaPredicted RBP22.23■■□□□ 1.15
ABCA4-203ENST00000465352 A2ML1A8K2U0 1454 aa22.22■■□□□ 1.15
ABCA4-203ENST00000465352 PLA2R1Q13018 1463 aa22.22■■□□□ 1.15
ABCA4-203ENST00000465352 EIF2AK4Q9P2K8 1649 aaKnown RBP22.22■■□□□ 1.15
ABCA4-203ENST00000465352 NCKAP5LQ9HCH0 1330 aa22.22■■□□□ 1.15
ABCA4-203ENST00000465352 SHANK2Q9UPX8 1470 aa22.22■■□□□ 1.15
ABCA4-203ENST00000465352 DUOX2Q9NRD8 1548 aa22.21■■□□□ 1.15
ABCA4-203ENST00000465352 ABCC5O15440 1437 aa22.21■■□□□ 1.15
ABCA4-203ENST00000465352 RNF17Q9BXT8 1623 aaKnown RBP22.2■■□□□ 1.15
ABCA4-203ENST00000465352 KIF15Q9NS87 1388 aa22.2■■□□□ 1.14
ABCA4-203ENST00000465352 TCOF1Q13428 1488 aaKnown RBP22.19■■□□□ 1.14
ABCA4-203ENST00000465352 DAPK1P53355 1430 aa22.18■■□□□ 1.14
ABCA4-203ENST00000465352 RRP7BPQ9NSQ0 103 aa22.18■■□□□ 1.14
ABCA4-203ENST00000465352 CROCC2H7BZ55 1655 aa22.17■■□□□ 1.14
ABCA4-203ENST00000465352 ZC3H13Q5T200 1668 aaKnown RBP22.17■■□□□ 1.14
ABCA4-203ENST00000465352 ANKRD30AQ9BXX3 1397 aa22.15■■□□□ 1.14
ABCA4-203ENST00000465352 THEMISQ8N1K5 641 aaPredicted RBP22.15■■□□□ 1.14
ABCA4-203ENST00000465352 DNMT1P26358 1616 aaKnown RBP22.15■■□□□ 1.14
ABCA4-203ENST00000465352 ABCC3O15438 1527 aa22.15■■□□□ 1.14
ABCA4-203ENST00000465352 NLRP1Q9C000 1473 aa22.15■■□□□ 1.14
ABCA4-203ENST00000465352 ERBINQ96RT1 1412 aa22.14■■□□□ 1.14
ABCA4-203ENST00000465352 CHIC2Q9UKJ5 165 aa22.13■■□□□ 1.13
ABCA4-203ENST00000465352 FAM50AQ14320 339 aaKnown RBP22.12■■□□□ 1.13
ABCA4-203ENST00000465352 ANKLE2Q86XL3 938 aa22.11■■□□□ 1.13
ABCA4-203ENST00000465352 KANK1Q14678 1352 aa22.11■■□□□ 1.13
ABCA4-203ENST00000465352 LTBP4Q8N2S1 1624 aa22.09■■□□□ 1.13
ABCA4-203ENST00000465352 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.09■■□□□ 1.13
ABCA4-203ENST00000465352 MROH1Q8NDA8 1641 aa22.09■■□□□ 1.13
ABCA4-203ENST00000465352 UGGT1Q9NYU2 1555 aa22.08■■□□□ 1.13
ABCA4-203ENST00000465352 IQSEC2Q5JU85 1478 aa22.08■■□□□ 1.12
ABCA4-203ENST00000465352 CEP152O94986 1710 aa22.07■■□□□ 1.12
ABCA4-203ENST00000465352 CFAP65Q6ZU64 1925 aaKnown RBP22.07■■□□□ 1.12
ABCA4-203ENST00000465352 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.07■■□□□ 1.12
ABCA4-203ENST00000465352 SPATA31D1Q6ZQQ2 1576 aa22.07■■□□□ 1.12
ABCA4-203ENST00000465352 ZNF335Q9H4Z2 1342 aaPredicted RBP22.06■■□□□ 1.12
ABCA4-203ENST00000465352 ERVK-7P63135 1459 aa22.06■■□□□ 1.12
ABCA4-203ENST00000465352 PRDM15P57071 1507 aaPredicted RBP22.06■■□□□ 1.12
ABCA4-203ENST00000465352 ARHGAP31Q2M1Z3 1444 aa22.04■■□□□ 1.12
ABCA4-203ENST00000465352 POLR1AO95602 1720 aaPredicted RBP22.03■■□□□ 1.12
ABCA4-203ENST00000465352 ADGRL2O95490 1459 aa22.02■■□□□ 1.12
ABCA4-203ENST00000465352 DEPDC5O75140 1603 aa22■■□□□ 1.11
ABCA4-203ENST00000465352 NEURL4Q96JN8 1562 aa21.97■■□□□ 1.11
ABCA4-203ENST00000465352 NPHP4O75161 1426 aaPredicted RBP21.97■■□□□ 1.11
ABCA4-203ENST00000465352 MED14O60244 1454 aa21.96■■□□□ 1.11
ABCA4-203ENST00000465352 STAG3Q9UJ98 1225 aa21.95■■□□□ 1.1
ABCA4-203ENST00000465352 ANKRD50Q9ULJ7 1429 aa21.95■■□□□ 1.1
ABCA4-203ENST00000465352 LMTK2Q8IWU2 1503 aa21.95■■□□□ 1.1
ABCA4-203ENST00000465352 UBAP1LF5GYI3 381 aa21.93■■□□□ 1.1
ABCA4-203ENST00000465352 EID1Q9Y6B2 187 aa21.92■■□□□ 1.1
ABCA4-203ENST00000465352 VWDEQ8N2E2 1590 aa21.91■■□□□ 1.1
ABCA4-203ENST00000465352 CPS1P31327 1500 aa21.91■■□□□ 1.1
ABCA4-203ENST00000465352 UBR1Q8IWV7 1749 aa21.91■■□□□ 1.1
ABCA4-203ENST00000465352 IQGAP1P46940 1657 aa21.89■■□□□ 1.1
ABCA4-203ENST00000465352 TXNDC2Q86VQ3 553 aa21.89■■□□□ 1.09
ABCA4-203ENST00000465352 ROCK1Q13464 1354 aa21.88■■□□□ 1.09
ABCA4-203ENST00000465352 PPARGC1BQ86YN6 1023 aaKnown RBP21.88■■□□□ 1.09
ABCA4-203ENST00000465352 SCAF11Q99590 1463 aaKnown RBP21.88■■□□□ 1.09
ABCA4-203ENST00000465352 IDI1Q13907 227 aa21.86■■□□□ 1.09
ABCA4-203ENST00000465352 SLC52A1Q9NWF4 448 aa21.86■■□□□ 1.09
ABCA4-203ENST00000465352 SLIT1O75093 1534 aa21.85■■□□□ 1.09
ABCA4-203ENST00000465352 EFCAB6Q5THR3 1501 aa21.85■■□□□ 1.09
ABCA4-203ENST00000465352 TOM1O60784 492 aa21.85■■□□□ 1.09
ABCA4-203ENST00000465352 ITGAEP38570 1179 aa21.85■■□□□ 1.09
ABCA4-203ENST00000465352 ARHGAP23Q9P227 1491 aa21.84■■□□□ 1.09
ABCA4-203ENST00000465352 PIK3C2BO00750 1634 aa21.84■■□□□ 1.09
ABCA4-203ENST00000465352 RPRD2Q5VT52 1461 aaKnown RBP21.83■■□□□ 1.09
ABCA4-203ENST00000465352 NOS1P29475 1434 aa21.83■■□□□ 1.09
ABCA4-203ENST00000465352 LTKP29376 864 aa21.83■■□□□ 1.09
ABCA4-203ENST00000465352 TMEM2Q9UHN6 1383 aa21.83■■□□□ 1.08
ABCA4-203ENST00000465352 KDM5AP29375 1690 aaKnown RBP21.81■■□□□ 1.08
ABCA4-203ENST00000465352 TET3O43151 1660 aa21.79■■□□□ 1.08
ABCA4-203ENST00000465352 SYNMO15061 1565 aa21.79■■□□□ 1.08
ABCA4-203ENST00000465352 SCAF1Q9H7N4 1312 aaKnown RBP21.79■■□□□ 1.08
ABCA4-203ENST00000465352 UNC13BO14795 1591 aa21.78■■□□□ 1.08
ABCA4-203ENST00000465352 HDGFP51858 240 aaKnown RBP21.76■■□□□ 1.07
ABCA4-203ENST00000465352 PIP4K2BP78356 416 aa21.75■■□□□ 1.07
ABCA4-203ENST00000465352 GCC2Q8IWJ2 1684 aa21.75■■□□□ 1.07
ABCA4-203ENST00000465352 ADGRB3O60242 1522 aa21.75■■□□□ 1.07
ABCA4-203ENST00000465352 NUP155O75694 1391 aa21.74■■□□□ 1.07
ABCA4-203ENST00000465352 DISP3Q9P2K9 1392 aa21.74■■□□□ 1.07
ABCA4-203ENST00000465352 BCANQ96GW7 911 aa21.72■■□□□ 1.07
ABCA4-203ENST00000465352 LRRC7Q96NW7 1537 aa21.71■■□□□ 1.07
ABCA4-203ENST00000465352 STRCP1A6NGW2 1772 aa21.7■■□□□ 1.06
ABCA4-203ENST00000465352 RRBP1Q9P2E9 1410 aaKnown RBP21.7■■□□□ 1.06
ABCA4-203ENST00000465352 IQGAP3Q86VI3 1631 aa21.69■■□□□ 1.06
ABCA4-203ENST00000465352 CHGAP10645 457 aaKnown RBP21.69■■□□□ 1.06
ABCA4-203ENST00000465352 PPP1R15AO75807 674 aaPredicted RBP21.68■■□□□ 1.06
ABCA4-203ENST00000465352 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.67■■□□□ 1.06
ABCA4-203ENST00000465352 SLC26A8Q96RN1 970 aa21.67■■□□□ 1.06
ABCA4-203ENST00000465352 E9PCH4 1651 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms