RNA–Protein interactions for RNA: ENST00000465271.5

CNIH4-205, Transcript of cornichon family AMPA receptor auxiliary protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNIH4, Length 4,125 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4-205ENST00000465271 MYO5BQ9ULV0 1848 aa13.6□□□□□ -0.23
CNIH4-205ENST00000465271 ABCC3O15438 1527 aa13.6□□□□□ -0.23
CNIH4-205ENST00000465271 PLEKHD1A6NEE1 506 aa13.6□□□□□ -0.23
CNIH4-205ENST00000465271 MADDQ8WXG6 1647 aa13.58□□□□□ -0.24
CNIH4-205ENST00000465271 NRXN1Q9ULB1 1477 aa13.58□□□□□ -0.24
CNIH4-205ENST00000465271 ANKRD50Q9ULJ7 1429 aa13.57□□□□□ -0.24
CNIH4-205ENST00000465271 CDK11AQ9UQ88 783 aaPredicted RBP13.57□□□□□ -0.24
CNIH4-205ENST00000465271 IQGAP1P46940 1657 aa13.57□□□□□ -0.24
CNIH4-205ENST00000465271 ADGRB3O60242 1522 aa13.55□□□□□ -0.24
CNIH4-205ENST00000465271 ADAMTSL3P82987 1691 aa13.55□□□□□ -0.24
CNIH4-205ENST00000465271 MYO3AQ8NEV4 1616 aa13.54□□□□□ -0.24
CNIH4-205ENST00000465271 SPATA31D1Q6ZQQ2 1576 aa13.54□□□□□ -0.24
CNIH4-205ENST00000465271 TMEM131LA2VDJ0 1609 aa13.54□□□□□ -0.24
CNIH4-205ENST00000465271 UHRF1BP1Q6BDS2 1440 aa13.53□□□□□ -0.24
CNIH4-205ENST00000465271 SCAPERQ9BY12 1400 aa13.53□□□□□ -0.24
CNIH4-205ENST00000465271 RSPH4AQ5TD94 716 aa13.53□□□□□ -0.24
CNIH4-205ENST00000465271 KIF15Q9NS87 1388 aa13.52□□□□□ -0.24
CNIH4-205ENST00000465271 ARHGAP31Q2M1Z3 1444 aa13.52□□□□□ -0.24
CNIH4-205ENST00000465271 CLTCQ00610 1675 aaKnown RBP13.52□□□□□ -0.25
CNIH4-205ENST00000465271 SPATA31E1Q6ZUB1 1445 aa13.52□□□□□ -0.25
CNIH4-205ENST00000465271 YEATS2Q9ULM3 1422 aa13.52□□□□□ -0.25
CNIH4-205ENST00000465271 NRXN3Q9Y4C0 1643 aa13.51□□□□□ -0.25
CNIH4-205ENST00000465271 A2MP01023 1474 aa13.51□□□□□ -0.25
CNIH4-205ENST00000465271 DHX29Q7Z478 1369 aaKnown RBP13.51□□□□□ -0.25
CNIH4-205ENST00000465271 ANKRD30AQ9BXX3 1397 aa13.5□□□□□ -0.25
CNIH4-205ENST00000465271 CFDP1Q9UEE9 299 aaPredicted RBP13.5□□□□□ -0.25
CNIH4-205ENST00000465271 KIF1BO60333 1816 aa13.5□□□□□ -0.25
CNIH4-205ENST00000465271 C3P01024 1663 aa13.5□□□□□ -0.25
CNIH4-205ENST00000465271 ZNF142P52746 1687 aaPredicted RBP13.5□□□□□ -0.25
CNIH4-205ENST00000465271 NOS1P29475 1434 aa13.49□□□□□ -0.25
CNIH4-205ENST00000465271 ARID3CA6NKF2 412 aa13.49□□□□□ -0.25
CNIH4-205ENST00000465271 APLP2Q06481 763 aa13.47□□□□□ -0.25
CNIH4-205ENST00000465271 HNRNPMP52272 730 aaKnown RBP eCLIP13.47□□□□□ -0.25
CNIH4-205ENST00000465271 DNAJC5Q9H3Z4 198 aa13.47□□□□□ -0.25
CNIH4-205ENST00000465271 UBR1Q8IWV7 1749 aa13.46□□□□□ -0.26
CNIH4-205ENST00000465271 NEXMIFQ5QGS0 1516 aa13.44□□□□□ -0.26
CNIH4-205ENST00000465271 FER1L4A9Z1Z3 1794 aa13.43□□□□□ -0.26
CNIH4-205ENST00000465271 MYOM1P52179 1685 aa13.43□□□□□ -0.26
CNIH4-205ENST00000465271 TTBK1Q5TCY1 1321 aaPredicted RBP13.42□□□□□ -0.26
CNIH4-205ENST00000465271 UGGT1Q9NYU2 1555 aa13.42□□□□□ -0.26
CNIH4-205ENST00000465271 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.41□□□□□ -0.26
CNIH4-205ENST00000465271 EFCAB2Q5VUJ9 269 aa13.41□□□□□ -0.26
CNIH4-205ENST00000465271 ACIN1Q9UKV3 1341 aaKnown RBP13.4□□□□□ -0.26
CNIH4-205ENST00000465271 NPATQ14207 1427 aa13.4□□□□□ -0.26
CNIH4-205ENST00000465271 HNRNPUL2Q1KMD3 747 aaKnown RBP13.4□□□□□ -0.26
CNIH4-205ENST00000465271 MYOM2P54296 1465 aa13.4□□□□□ -0.26
CNIH4-205ENST00000465271 ADGRB1O14514 1584 aa13.39□□□□□ -0.27
CNIH4-205ENST00000465271 SETBP1Q9Y6X0 1596 aa13.39□□□□□ -0.27
CNIH4-205ENST00000465271 KNDC1Q76NI1 1749 aa13.39□□□□□ -0.27
CNIH4-205ENST00000465271 ASXL1Q8IXJ9 1541 aa13.38□□□□□ -0.27
CNIH4-205ENST00000465271 CYB5RLQ6IPT4 315 aa13.37□□□□□ -0.27
CNIH4-205ENST00000465271 AFAP1Q8N556 730 aa13.37□□□□□ -0.27
CNIH4-205ENST00000465271 ARHGEF28Q8N1W1 1705 aaKnown RBP13.36□□□□□ -0.27
CNIH4-205ENST00000465271 FAM50AQ14320 339 aaKnown RBP13.36□□□□□ -0.27
CNIH4-205ENST00000465271 RALGAPBQ86X10 1494 aa13.36□□□□□ -0.27
CNIH4-205ENST00000465271 MPHOSPH9Q99550 1183 aa13.35□□□□□ -0.27
CNIH4-205ENST00000465271 ATP1B4Q9UN42 357 aaPredicted RBP13.33□□□□□ -0.27
CNIH4-205ENST00000465271 TIMELESSQ9UNS1 1208 aa13.33□□□□□ -0.28
CNIH4-205ENST00000465271 GPRASP1Q5JY77 1395 aa13.33□□□□□ -0.28
CNIH4-205ENST00000465271 RRP7BPQ9NSQ0 103 aa13.32□□□□□ -0.28
CNIH4-205ENST00000465271 ERVK-7P63135 1459 aa13.31□□□□□ -0.28
CNIH4-205ENST00000465271 PRAG1Q86YV5 1406 aa13.31□□□□□ -0.28
CNIH4-205ENST00000465271 CNTLNQ9NXG0 1405 aa13.31□□□□□ -0.28
CNIH4-205ENST00000465271 KCNH8Q96L42 1107 aa13.28□□□□□ -0.28
CNIH4-205ENST00000465271 RIMS1Q86UR5 1692 aaKnown RBP13.28□□□□□ -0.28
CNIH4-205ENST00000465271 CHIC2Q9UKJ5 165 aa13.27□□□□□ -0.29
CNIH4-205ENST00000465271 ZFYVE9O95405 1425 aa13.26□□□□□ -0.29
CNIH4-205ENST00000465271 SPAG9O60271 1321 aaKnown RBP13.26□□□□□ -0.29
CNIH4-205ENST00000465271 PTPRMP28827 1452 aa13.25□□□□□ -0.29
CNIH4-205ENST00000465271 MED14O60244 1454 aa13.24□□□□□ -0.29
CNIH4-205ENST00000465271 SLIT1O75093 1534 aa13.24□□□□□ -0.29
CNIH4-205ENST00000465271 PIK3C2GO75747 1445 aa13.24□□□□□ -0.29
CNIH4-205ENST00000465271 ARHGAP23Q9P227 1491 aa13.23□□□□□ -0.29
CNIH4-205ENST00000465271 RAPGEF3O95398 923 aa13.23□□□□□ -0.29
CNIH4-205ENST00000465271 ZEB1P37275 1124 aaPredicted RBP13.23□□□□□ -0.29
CNIH4-205ENST00000465271 PPP1R15AO75807 674 aaPredicted RBP13.23□□□□□ -0.29
CNIH4-205ENST00000465271 XRN1Q8IZH2 1706 aaKnown RBP13.22□□□□□ -0.29
CNIH4-205ENST00000465271 TOPAZ1Q8N9V7 1692 aa13.22□□□□□ -0.29
CNIH4-205ENST00000465271 SIN3AQ96ST3 1273 aa13.22□□□□□ -0.29
CNIH4-205ENST00000465271 NUP155O75694 1391 aa13.22□□□□□ -0.29
CNIH4-205ENST00000465271 FAM69CQ0P6D2 419 aa13.21□□□□□ -0.29
CNIH4-205ENST00000465271 CFAP65Q6ZU64 1925 aaKnown RBP13.2□□□□□ -0.3
CNIH4-205ENST00000465271 QRICH2Q9H0J4 1663 aa13.19□□□□□ -0.3
CNIH4-205ENST00000465271 A2ML1A8K2U0 1454 aa13.19□□□□□ -0.3
CNIH4-205ENST00000465271 USP54Q70EL1 1684 aa13.18□□□□□ -0.3
CNIH4-205ENST00000465271 MARF1Q9Y4F3 1742 aaKnown RBP13.18□□□□□ -0.3
CNIH4-205ENST00000465271 NBPF8Q3BBV2 869 aa13.18□□□□□ -0.3
CNIH4-205ENST00000465271 USP32Q8NFA0 1604 aa13.17□□□□□ -0.3
CNIH4-205ENST00000465271 ADGRB2O60241 1585 aa13.17□□□□□ -0.3
CNIH4-205ENST00000465271 ZNF777Q9ULD5 760 aaPredicted RBP13.16□□□□□ -0.3
CNIH4-205ENST00000465271 FOXD1Q16676 465 aa13.15□□□□□ -0.3
CNIH4-205ENST00000465271 CPS1P31327 1500 aa13.15□□□□□ -0.3
CNIH4-205ENST00000465271 XIRP1Q702N8 1843 aaKnown RBP13.15□□□□□ -0.3
CNIH4-205ENST00000465271 STRCP1A6NGW2 1772 aa13.15□□□□□ -0.3
CNIH4-205ENST00000465271 TSPY4P0CV99 314 aa13.15□□□□□ -0.31
CNIH4-205ENST00000465271 TSPY10P0CW01 314 aa13.15□□□□□ -0.31
CNIH4-205ENST00000465271 ITGAEP38570 1179 aa13.15□□□□□ -0.31
CNIH4-205ENST00000465271 CHD2O14647 1828 aaKnown RBP13.14□□□□□ -0.31
CNIH4-205ENST00000465271 NRKQ7Z2Y5 1582 aa13.14□□□□□ -0.31
CNIH4-205ENST00000465271 PPP6R1Q9UPN7 881 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 120.7 ms