RNA–Protein interactions for RNA: ENST00000465187.1

EDEM1-205, Transcript of ER degradation enhancing alpha-mannosidase like protein 1, humanhuman

TSL 4

Gene EDEM1, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM1-205ENST00000465187 FBXO31Q5XUX0 539 aaPredicted RBP34.17■■■■□ 3.06
EDEM1-205ENST00000465187 LTBP4Q8N2S1 1624 aa34.17■■■■□ 3.06
EDEM1-205ENST00000465187 TSPY4P0CV99 314 aa34.15■■■■□ 3.06
EDEM1-205ENST00000465187 TSPY10P0CW01 314 aa34.15■■■■□ 3.06
EDEM1-205ENST00000465187 MIA2Q96PC5 1412 aa34.13■■■■□ 3.05
EDEM1-205ENST00000465187 DNMT1P26358 1616 aaKnown RBP34.13■■■■□ 3.05
EDEM1-205ENST00000465187 RNF17Q9BXT8 1623 aaKnown RBP34.12■■■■□ 3.05
EDEM1-205ENST00000465187 PZPP20742 1482 aa34.1■■■■□ 3.05
EDEM1-205ENST00000465187 CROCC2H7BZ55 1655 aa34.09■■■■□ 3.05
EDEM1-205ENST00000465187 A2ML1A8K2U0 1454 aa34.09■■■■□ 3.05
EDEM1-205ENST00000465187 MROH1Q8NDA8 1641 aa34.08■■■■□ 3.05
EDEM1-205ENST00000465187 PLA2R1Q13018 1463 aa34.08■■■■□ 3.05
EDEM1-205ENST00000465187 TCOF1Q13428 1488 aaKnown RBP34.08■■■■□ 3.05
EDEM1-205ENST00000465187 WASHC2CQ9Y4E1 1318 aa34.08■■■■□ 3.05
EDEM1-205ENST00000465187 PTPN23Q9H3S7 1636 aa34.08■■■■□ 3.05
EDEM1-205ENST00000465187 FAM135AQ9P2D6 1515 aa34.07■■■■□ 3.04
EDEM1-205ENST00000465187 TNRQ92752 1358 aa34.06■■■■□ 3.04
EDEM1-205ENST00000465187 EIF2AK4Q9P2K8 1649 aaKnown RBP34.04■■■■□ 3.04
EDEM1-205ENST00000465187 CEP152O94986 1710 aa34.04■■■■□ 3.04
EDEM1-205ENST00000465187 ABCC3O15438 1527 aa34.03■■■■□ 3.04
EDEM1-205ENST00000465187 ZNF335Q9H4Z2 1342 aaPredicted RBP34.02■■■■□ 3.04
EDEM1-205ENST00000465187 ABCC5O15440 1437 aa34■■■■□ 3.03
EDEM1-205ENST00000465187 POLR1AO95602 1720 aaPredicted RBP33.99■■■■□ 3.03
EDEM1-205ENST00000465187 ZC3H13Q5T200 1668 aaKnown RBP33.98■■■■□ 3.03
EDEM1-205ENST00000465187 NEURL4Q96JN8 1562 aa33.98■■■■□ 3.03
EDEM1-205ENST00000465187 CFAP65Q6ZU64 1925 aaKnown RBP33.96■■■■□ 3.03
EDEM1-205ENST00000465187 APLP2Q06481 763 aa33.96■■■■□ 3.03
EDEM1-205ENST00000465187 DUOX2Q9NRD8 1548 aa33.95■■■■□ 3.03
EDEM1-205ENST00000465187 PKD2Q13563 968 aa33.95■■■■□ 3.03
EDEM1-205ENST00000465187 FGD6Q6ZV73 1430 aa33.95■■■■□ 3.02
EDEM1-205ENST00000465187 DAPK1P53355 1430 aa33.92■■■■□ 3.02
EDEM1-205ENST00000465187 SHANK2Q9UPX8 1470 aa33.92■■■■□ 3.02
EDEM1-205ENST00000465187 KIF15Q9NS87 1388 aa33.91■■■■□ 3.02
EDEM1-205ENST00000465187 SPATA31D1Q6ZQQ2 1576 aa33.89■■■■□ 3.02
EDEM1-205ENST00000465187 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.89■■■■□ 3.02
EDEM1-205ENST00000465187 RRP7BPQ9NSQ0 103 aa33.89■■■■□ 3.02
EDEM1-205ENST00000465187 UGGT1Q9NYU2 1555 aa33.87■■■■□ 3.01
EDEM1-205ENST00000465187 ERVK-7P63135 1459 aa33.87■■■■□ 3.01
EDEM1-205ENST00000465187 NLRP1Q9C000 1473 aa33.86■■■■□ 3.01
EDEM1-205ENST00000465187 PRDM15P57071 1507 aaPredicted RBP33.84■■■■□ 3.01
EDEM1-205ENST00000465187 IQSEC2Q5JU85 1478 aa33.84■■■■□ 3.01
EDEM1-205ENST00000465187 CHIC2Q9UKJ5 165 aa33.82■■■■□ 3
EDEM1-205ENST00000465187 DEPDC5O75140 1603 aa33.81■■■■□ 3
EDEM1-205ENST00000465187 ERBINQ96RT1 1412 aa33.8■■■■□ 3
EDEM1-205ENST00000465187 UBR1Q8IWV7 1749 aa33.76■■■■□ 3
EDEM1-205ENST00000465187 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.75■■■□□ 2.99
EDEM1-205ENST00000465187 THEMISQ8N1K5 641 aaPredicted RBP33.73■■■□□ 2.99
EDEM1-205ENST00000465187 VWDEQ8N2E2 1590 aa33.72■■■□□ 2.99
EDEM1-205ENST00000465187 ANKLE2Q86XL3 938 aa33.72■■■□□ 2.99
EDEM1-205ENST00000465187 IQGAP1P46940 1657 aa33.71■■■□□ 2.99
EDEM1-205ENST00000465187 NPHP4O75161 1426 aaPredicted RBP33.7■■■□□ 2.98
EDEM1-205ENST00000465187 MED14O60244 1454 aa33.69■■■□□ 2.98
EDEM1-205ENST00000465187 STRCP1A6NGW2 1772 aa33.68■■■□□ 2.98
EDEM1-205ENST00000465187 ANKRD30AQ9BXX3 1397 aa33.68■■■□□ 2.98
EDEM1-205ENST00000465187 ARHGAP31Q2M1Z3 1444 aa33.67■■■□□ 2.98
EDEM1-205ENST00000465187 UBAP1LF5GYI3 381 aa33.66■■■□□ 2.98
EDEM1-205ENST00000465187 FAM50AQ14320 339 aaKnown RBP33.66■■■□□ 2.98
EDEM1-205ENST00000465187 PIK3C2BO00750 1634 aa33.64■■■□□ 2.98
EDEM1-205ENST00000465187 ADGRL2O95490 1459 aa33.64■■■□□ 2.98
EDEM1-205ENST00000465187 CPS1P31327 1500 aa33.6■■■□□ 2.97
EDEM1-205ENST00000465187 LMTK2Q8IWU2 1503 aa33.59■■■□□ 2.97
EDEM1-205ENST00000465187 SYNMO15061 1565 aa33.58■■■□□ 2.97
EDEM1-205ENST00000465187 KANK1Q14678 1352 aa33.56■■■□□ 2.96
EDEM1-205ENST00000465187 ARHGAP23Q9P227 1491 aa33.55■■■□□ 2.96
EDEM1-205ENST00000465187 EFCAB6Q5THR3 1501 aa33.54■■■□□ 2.96
EDEM1-205ENST00000465187 LTKP29376 864 aa33.54■■■□□ 2.96
EDEM1-205ENST00000465187 SLIT1O75093 1534 aa33.53■■■□□ 2.96
EDEM1-205ENST00000465187 SCAF11Q99590 1463 aaKnown RBP33.53■■■□□ 2.96
EDEM1-205ENST00000465187 DISP3Q9P2K9 1392 aa33.53■■■□□ 2.96
EDEM1-205ENST00000465187 PPARGC1BQ86YN6 1023 aaKnown RBP33.53■■■□□ 2.96
EDEM1-205ENST00000465187 ALKQ9UM73 1620 aa33.53■■■□□ 2.96
EDEM1-205ENST00000465187 ANKRD50Q9ULJ7 1429 aa33.48■■■□□ 2.95
EDEM1-205ENST00000465187 ILDR2Q71H61 639 aa33.47■■■□□ 2.95
EDEM1-205ENST00000465187 PIP4K2BP78356 416 aa33.45■■■□□ 2.95
EDEM1-205ENST00000465187 IDI1Q13907 227 aa33.45■■■□□ 2.95
EDEM1-205ENST00000465187 TXNDC2Q86VQ3 553 aa33.45■■■□□ 2.95
EDEM1-205ENST00000465187 NOS1P29475 1434 aa33.45■■■□□ 2.94
EDEM1-205ENST00000465187 LRRC7Q96NW7 1537 aa33.44■■■□□ 2.94
EDEM1-205ENST00000465187 SCAF1Q9H7N4 1312 aaKnown RBP33.44■■■□□ 2.94
EDEM1-205ENST00000465187 KDM5AP29375 1690 aaKnown RBP33.42■■■□□ 2.94
EDEM1-205ENST00000465187 MYO5BQ9ULV0 1848 aa33.42■■■□□ 2.94
EDEM1-205ENST00000465187 TMEM2Q9UHN6 1383 aa33.41■■■□□ 2.94
EDEM1-205ENST00000465187 UNC13BO14795 1591 aa33.41■■■□□ 2.94
EDEM1-205ENST00000465187 XIRP1Q702N8 1843 aaKnown RBP33.4■■■□□ 2.94
EDEM1-205ENST00000465187 TET3O43151 1660 aa33.4■■■□□ 2.94
EDEM1-205ENST00000465187 ADGRB3O60242 1522 aa33.38■■■□□ 2.93
EDEM1-205ENST00000465187 GCC2Q8IWJ2 1684 aa33.36■■■□□ 2.93
EDEM1-205ENST00000465187 HSPA1LP34931 641 aa33.36■■■□□ 2.93
EDEM1-205ENST00000465187 STAG3Q9UJ98 1225 aa33.36■■■□□ 2.93
EDEM1-205ENST00000465187 TOM1O60784 492 aa33.34■■■□□ 2.93
EDEM1-205ENST00000465187 E9PCH4 1651 aa33.33■■■□□ 2.93
EDEM1-205ENST00000465187 ITGAEP38570 1179 aa33.33■■■□□ 2.93
EDEM1-205ENST00000465187 EID1Q9Y6B2 187 aa33.32■■■□□ 2.92
EDEM1-205ENST00000465187 SENP3Q9H4L4 574 aaPredicted RBP33.29■■■□□ 2.92
EDEM1-205ENST00000465187 RPRD2Q5VT52 1461 aaKnown RBP33.29■■■□□ 2.92
EDEM1-205ENST00000465187 ROCK1Q13464 1354 aa33.28■■■□□ 2.92
EDEM1-205ENST00000465187 IQGAP3Q86VI3 1631 aa33.27■■■□□ 2.92
EDEM1-205ENST00000465187 TMEM131LA2VDJ0 1609 aa33.24■■■□□ 2.91
EDEM1-205ENST00000465187 SLC26A8Q96RN1 970 aa33.24■■■□□ 2.91
EDEM1-205ENST00000465187 SLC52A1Q9NWF4 448 aa33.21■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms