RNA–Protein interactions for RNA: ENST00000465030.1

SNX12-203, Transcript of sorting nexin 12, humanhuman

TSL 2

Gene SNX12, Length 946 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-203ENST00000465030 UPF1Q92900 1129 aaKnown RBP eCLIP25.95■■□□□ 1.749e-9■■■■■ 53
SNX12-203ENST00000465030 IQGAP1P46940 1657 aa25.95■■□□□ 1.74
SNX12-203ENST00000465030 FBXO31Q5XUX0 539 aaPredicted RBP25.94■■□□□ 1.74
SNX12-203ENST00000465030 INO80Q9ULG1 1556 aaPredicted RBP25.94■■□□□ 1.74
SNX12-203ENST00000465030 ZNF777Q9ULD5 760 aaPredicted RBP25.91■■□□□ 1.74
SNX12-203ENST00000465030 CDC42BPAQ5VT25 1732 aa25.91■■□□□ 1.74
SNX12-203ENST00000465030 FAM135AQ9P2D6 1515 aa25.9■■□□□ 1.74
SNX12-203ENST00000465030 UGGT1Q9NYU2 1555 aa25.9■■□□□ 1.74
SNX12-203ENST00000465030 FAM135BQ49AJ0 1406 aa25.89■■□□□ 1.74
SNX12-203ENST00000465030 HNRNPMP52272 730 aaKnown RBP eCLIP25.89■■□□□ 1.74
SNX12-203ENST00000465030 PZPP20742 1482 aa25.89■■□□□ 1.73
SNX12-203ENST00000465030 LRRIQ1Q96JM4 1722 aa25.88■■□□□ 1.73
SNX12-203ENST00000465030 NLRP1Q9C000 1473 aa25.87■■□□□ 1.73
SNX12-203ENST00000465030 EEA1Q15075 1411 aa25.86■■□□□ 1.73
SNX12-203ENST00000465030 ARHGAP35Q9NRY4 1499 aa25.84■■□□□ 1.73
SNX12-203ENST00000465030 MIA2Q96PC5 1412 aa25.83■■□□□ 1.73
SNX12-203ENST00000465030 KIAA1107Q9UPP5 1409 aa25.82■■□□□ 1.72
SNX12-203ENST00000465030 ADGBQ8N7X0 1667 aa25.81■■□□□ 1.72
SNX12-203ENST00000465030 KDM5DQ9BY66 1539 aa25.78■■□□□ 1.72
SNX12-203ENST00000465030 PLEKHH2Q8IVE3 1493 aa25.77■■□□□ 1.72
SNX12-203ENST00000465030 GPATCH8Q9UKJ3 1502 aaKnown RBP25.76■■□□□ 1.71
SNX12-203ENST00000465030 ZC3H13Q5T200 1668 aaKnown RBP25.76■■□□□ 1.71
SNX12-203ENST00000465030 XIRP1Q702N8 1843 aaKnown RBP25.75■■□□□ 1.71
SNX12-203ENST00000465030 CCDC18Q5T9S5 1454 aa25.74■■□□□ 1.71
SNX12-203ENST00000465030 ROBO1Q9Y6N7 1651 aa25.71■■□□□ 1.71
SNX12-203ENST00000465030 TRIM52Q96A61 297 aa25.71■■□□□ 1.71
SNX12-203ENST00000465030 DHX29Q7Z478 1369 aaKnown RBP25.7■■□□□ 1.71
SNX12-203ENST00000465030 WASHC2CQ9Y4E1 1318 aa25.69■■□□□ 1.7
SNX12-203ENST00000465030 JCADQ9P266 1359 aa25.67■■□□□ 1.7
SNX12-203ENST00000465030 KIF3BO15066 747 aa25.66■■□□□ 1.7
SNX12-203ENST00000465030 CFDP1Q9UEE9 299 aaPredicted RBP25.66■■□□□ 1.7
SNX12-203ENST00000465030 SCAF11Q99590 1463 aaKnown RBP25.65■■□□□ 1.7
SNX12-203ENST00000465030 ZNF772Q68DY9 489 aaPredicted RBP25.64■■□□□ 1.7
SNX12-203ENST00000465030 RTEL1-TNFRSF6BF6WH68 1400 aa25.63■■□□□ 1.69
SNX12-203ENST00000465030 CASKIN1Q8WXD9 1431 aa25.63■■□□□ 1.69
SNX12-203ENST00000465030 TMEM94Q12767 1356 aa25.62■■□□□ 1.69
SNX12-203ENST00000465030 LRRC9Q6ZRR7 1453 aa25.61■■□□□ 1.69
SNX12-203ENST00000465030 UBTFP17480 764 aaKnown RBP25.6■■□□□ 1.69
SNX12-203ENST00000465030 LRP6O75581 1613 aa25.58■■□□□ 1.69
SNX12-203ENST00000465030 MAP3K1Q13233 1512 aa25.57■■□□□ 1.68
SNX12-203ENST00000465030 CDK12Q9NYV4 1490 aaPredicted RBP25.55■■□□□ 1.68
SNX12-203ENST00000465030 MBD5Q9P267 1494 aa25.55■■□□□ 1.68
SNX12-203ENST00000465030 PHLPP1O60346 1717 aa25.55■■□□□ 1.68
SNX12-203ENST00000465030 RXRBP28702 533 aa25.55■■□□□ 1.68
SNX12-203ENST00000465030 LTKP29376 864 aa25.55■■□□□ 1.68
SNX12-203ENST00000465030 CCNB3Q8WWL7 1395 aa25.55■■□□□ 1.68
SNX12-203ENST00000465030 MEX3CQ5U5Q3 659 aaKnown RBP25.54■■□□□ 1.68
SNX12-203ENST00000465030 ARHGAP23Q9P227 1491 aa25.53■■□□□ 1.68
SNX12-203ENST00000465030 TXNDC2Q86VQ3 553 aa25.52■■□□□ 1.68
SNX12-203ENST00000465030 EHMT2Q96KQ7 1210 aa25.52■■□□□ 1.68
SNX12-203ENST00000465030 SPATA31A6Q5VVP1 1343 aa25.52■■□□□ 1.68
SNX12-203ENST00000465030 ERVK-7P63135 1459 aa25.52■■□□□ 1.68
SNX12-203ENST00000465030 UBR1Q8IWV7 1749 aa25.51■■□□□ 1.68
SNX12-203ENST00000465030 ZNF644Q9H582 1327 aaPredicted RBP25.51■■□□□ 1.67
SNX12-203ENST00000465030 NCOA2Q15596 1464 aa25.51■■□□□ 1.67
SNX12-203ENST00000465030 SLIT1O75093 1534 aa25.51■■□□□ 1.67
SNX12-203ENST00000465030 COL16A1Q07092 1604 aaPredicted RBP25.48■■□□□ 1.67
SNX12-203ENST00000465030 FGD6Q6ZV73 1430 aa25.46■■□□□ 1.67
SNX12-203ENST00000465030 RBM33Q96EV2 1170 aaKnown RBP25.46■■□□□ 1.67
SNX12-203ENST00000465030 KCNA6P17658 529 aa25.45■■□□□ 1.66
SNX12-203ENST00000465030 SLAIN2Q9P270 581 aa25.45■■□□□ 1.66
SNX12-203ENST00000465030 FYCO1Q9BQS8 1478 aa25.45■■□□□ 1.66
SNX12-203ENST00000465030 ABCC3O15438 1527 aa25.44■■□□□ 1.66
SNX12-203ENST00000465030 CHIC1Q5VXU3 224 aa25.44■■□□□ 1.66
SNX12-203ENST00000465030 PROSER2Q86WR7 435 aaPredicted RBP25.44■■□□□ 1.66
SNX12-203ENST00000465030 EID1Q9Y6B2 187 aa25.43■■□□□ 1.66
SNX12-203ENST00000465030 PRDM15P57071 1507 aaPredicted RBP25.42■■□□□ 1.66
SNX12-203ENST00000465030 MSH6P52701 1360 aa25.42■■□□□ 1.66
SNX12-203ENST00000465030 TIAM1Q13009 1591 aa25.4■■□□□ 1.66
SNX12-203ENST00000465030 NKTRP30414 1462 aaKnown RBP25.38■■□□□ 1.65
SNX12-203ENST00000465030 CCDC141Q6ZP82 1450 aa25.37■■□□□ 1.65
SNX12-203ENST00000465030 RGS12O14924 1447 aa25.37■■□□□ 1.65
SNX12-203ENST00000465030 ZRANB1Q9UGI0 708 aa25.35■■□□□ 1.65
SNX12-203ENST00000465030 TMEM2Q9UHN6 1383 aa25.33■■□□□ 1.65
SNX12-203ENST00000465030 SHPRHQ149N8 1683 aa25.33■■□□□ 1.65
SNX12-203ENST00000465030 NWD1Q149M9 1564 aa25.32■■□□□ 1.64
SNX12-203ENST00000465030 SETBP1Q9Y6X0 1596 aa25.32■■□□□ 1.64
SNX12-203ENST00000465030 FOXD1Q16676 465 aa25.32■■□□□ 1.64
SNX12-203ENST00000465030 CAMSAP2Q08AD1 1489 aa25.32■■□□□ 1.64
SNX12-203ENST00000465030 AFF2P51816 1311 aa25.31■■□□□ 1.64
SNX12-203ENST00000465030 SLC26A8Q96RN1 970 aa25.3■■□□□ 1.64
SNX12-203ENST00000465030 MTUS2Q5JR59 1369 aa25.3■■□□□ 1.64
SNX12-203ENST00000465030 NUTM2BA6NNL0 878 aaPredicted RBP25.28■■□□□ 1.64
SNX12-203ENST00000465030 NUTM2EB1AL46 878 aaPredicted RBP25.28■■□□□ 1.64
SNX12-203ENST00000465030 NUTM2DQ5VT03 806 aaPredicted RBP25.28■■□□□ 1.64
SNX12-203ENST00000465030 NUTM2AQ8IVF1 878 aaPredicted RBP25.28■■□□□ 1.64
SNX12-203ENST00000465030 TET3O43151 1660 aa25.28■■□□□ 1.64
SNX12-203ENST00000465030 AHDC1Q5TGY3 1603 aaPredicted RBP25.27■■□□□ 1.64
SNX12-203ENST00000465030 EP400Q96L91 3159 aa25.26■■□□□ 1.63
SNX12-203ENST00000465030 RSPH4AQ5TD94 716 aa25.25■■□□□ 1.63
SNX12-203ENST00000465030 KDM5AP29375 1690 aaKnown RBP25.24■■□□□ 1.63
SNX12-203ENST00000465030 ATAD2Q6PL18 1390 aa25.24■■□□□ 1.63
SNX12-203ENST00000465030 RBM6P78332 1123 aaKnown RBP25.24■■□□□ 1.63
SNX12-203ENST00000465030 MROH1Q8NDA8 1641 aa25.23■■□□□ 1.63
SNX12-203ENST00000465030 CFAP65Q6ZU64 1925 aaKnown RBP25.22■■□□□ 1.63
SNX12-203ENST00000465030 PIK3C2BO00750 1634 aa25.22■■□□□ 1.63
SNX12-203ENST00000465030 CEP152O94986 1710 aa25.2■■□□□ 1.62
SNX12-203ENST00000465030 DIP2AQ14689 1571 aa25.19■■□□□ 1.62
SNX12-203ENST00000465030 QTRT2Q9H974 415 aaKnown RBP25.19■■□□□ 1.62
SNX12-203ENST00000465030 STAG3Q9UJ98 1225 aa25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms