RNA–Protein interactions for RNA: ENST00000464800.5

MCF2L-220, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-220ENST00000464800 DHX29Q7Z478 1369 aaKnown RBP23.55■■□□□ 1.36
MCF2L-220ENST00000464800 KDM5DQ9BY66 1539 aa23.55■■□□□ 1.36
MCF2L-220ENST00000464800 CCDC141Q6ZP82 1450 aa23.55■■□□□ 1.36
MCF2L-220ENST00000464800 CAMSAP2Q08AD1 1489 aa23.53■■□□□ 1.36
MCF2L-220ENST00000464800 PZPP20742 1482 aa23.52■■□□□ 1.36
MCF2L-220ENST00000464800 NEURL4Q96JN8 1562 aa23.52■■□□□ 1.36
MCF2L-220ENST00000464800 TNRQ92752 1358 aa23.51■■□□□ 1.35
MCF2L-220ENST00000464800 NCOA2Q15596 1464 aa23.49■■□□□ 1.35
MCF2L-220ENST00000464800 KIF3BO15066 747 aa23.48■■□□□ 1.35
MCF2L-220ENST00000464800 CPS1P31327 1500 aa23.48■■□□□ 1.35
MCF2L-220ENST00000464800 ARHGEF5Q12774 1597 aa23.46■■□□□ 1.35
MCF2L-220ENST00000464800 FBXO31Q5XUX0 539 aaPredicted RBP23.45■■□□□ 1.34
MCF2L-220ENST00000464800 WASHC2CQ9Y4E1 1318 aa23.43■■□□□ 1.34
MCF2L-220ENST00000464800 RSPH4AQ5TD94 716 aa23.43■■□□□ 1.34
MCF2L-220ENST00000464800 NLRP1Q9C000 1473 aa23.43■■□□□ 1.34
MCF2L-220ENST00000464800 SHANK2Q9UPX8 1470 aa23.42■■□□□ 1.34
MCF2L-220ENST00000464800 UGGT1Q9NYU2 1555 aa23.41■■□□□ 1.34
MCF2L-220ENST00000464800 ZC3H13Q5T200 1668 aaKnown RBP23.41■■□□□ 1.34
MCF2L-220ENST00000464800 DEPDC5O75140 1603 aa23.41■■□□□ 1.34
MCF2L-220ENST00000464800 RNF17Q9BXT8 1623 aaKnown RBP23.41■■□□□ 1.34
MCF2L-220ENST00000464800 VWDEQ8N2E2 1590 aa23.39■■□□□ 1.33
MCF2L-220ENST00000464800 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.39■■□□□ 1.33
MCF2L-220ENST00000464800 SCAF1Q9H7N4 1312 aaKnown RBP23.38■■□□□ 1.33
MCF2L-220ENST00000464800 MIA2Q96PC5 1412 aa23.38■■□□□ 1.33
MCF2L-220ENST00000464800 ANKLE2Q86XL3 938 aa23.37■■□□□ 1.33
MCF2L-220ENST00000464800 IQGAP1P46940 1657 aa23.37■■□□□ 1.33
MCF2L-220ENST00000464800 THEMISQ8N1K5 641 aaPredicted RBP23.36■■□□□ 1.33
MCF2L-220ENST00000464800 EIF2AK4Q9P2K8 1649 aaKnown RBP23.36■■□□□ 1.33
MCF2L-220ENST00000464800 MED14O60244 1454 aa23.36■■□□□ 1.33
MCF2L-220ENST00000464800 MED1Q15648 1581 aaPredicted RBP23.35■■□□□ 1.33
MCF2L-220ENST00000464800 MAST1Q9Y2H9 1570 aa23.35■■□□□ 1.33
MCF2L-220ENST00000464800 TOM1O60784 492 aa23.35■■□□□ 1.33
MCF2L-220ENST00000464800 NPHP4O75161 1426 aaPredicted RBP23.34■■□□□ 1.33
MCF2L-220ENST00000464800 ABCC3O15438 1527 aa23.34■■□□□ 1.33
MCF2L-220ENST00000464800 TSPY4P0CV99 314 aa23.34■■□□□ 1.33
MCF2L-220ENST00000464800 TSPY10P0CW01 314 aa23.34■■□□□ 1.33
MCF2L-220ENST00000464800 PIP4K2BP78356 416 aa23.34■■□□□ 1.33
MCF2L-220ENST00000464800 HSPA1LP34931 641 aa23.33■■□□□ 1.33
MCF2L-220ENST00000464800 LRRC9Q6ZRR7 1453 aa23.3■■□□□ 1.32
MCF2L-220ENST00000464800 CEP152O94986 1710 aa23.3■■□□□ 1.32
MCF2L-220ENST00000464800 SYNMO15061 1565 aa23.28■■□□□ 1.32
MCF2L-220ENST00000464800 MROH1Q8NDA8 1641 aa23.28■■□□□ 1.32
MCF2L-220ENST00000464800 ERVK-7P63135 1459 aa23.28■■□□□ 1.32
MCF2L-220ENST00000464800 STRCP1A6NGW2 1772 aa23.27■■□□□ 1.32
MCF2L-220ENST00000464800 ALKQ9UM73 1620 aa23.27■■□□□ 1.32
MCF2L-220ENST00000464800 VPS8Q8N3P4 1428 aa23.26■■□□□ 1.31
MCF2L-220ENST00000464800 UBR1Q8IWV7 1749 aa23.25■■□□□ 1.31
MCF2L-220ENST00000464800 CFAP65Q6ZU64 1925 aaKnown RBP23.23■■□□□ 1.31
MCF2L-220ENST00000464800 MYOM3Q5VTT5 1437 aa23.21■■□□□ 1.31
MCF2L-220ENST00000464800 DUOX2Q9NRD8 1548 aa23.21■■□□□ 1.31
MCF2L-220ENST00000464800 MAP3K1Q13233 1512 aa23.2■■□□□ 1.3
MCF2L-220ENST00000464800 LRRC7Q96NW7 1537 aa23.2■■□□□ 1.3
MCF2L-220ENST00000464800 CROCC2H7BZ55 1655 aa23.19■■□□□ 1.3
MCF2L-220ENST00000464800 PRDM15P57071 1507 aaPredicted RBP23.18■■□□□ 1.3
MCF2L-220ENST00000464800 SCAF11Q99590 1463 aaKnown RBP23.17■■□□□ 1.3
MCF2L-220ENST00000464800 SLIT1O75093 1534 aa23.13■■□□□ 1.29
MCF2L-220ENST00000464800 KANK4Q5T7N3 995 aaPredicted RBP23.13■■□□□ 1.29
MCF2L-220ENST00000464800 PHF23Q9BUL5 403 aaPredicted RBP23.13■■□□□ 1.29
MCF2L-220ENST00000464800 ARHGAP23Q9P227 1491 aa23.12■■□□□ 1.29
MCF2L-220ENST00000464800 ERBINQ96RT1 1412 aa23.12■■□□□ 1.29
MCF2L-220ENST00000464800 ARHGAP31Q2M1Z3 1444 aa23.11■■□□□ 1.29
MCF2L-220ENST00000464800 KIF15Q9NS87 1388 aa23.11■■□□□ 1.29
MCF2L-220ENST00000464800 XIRP1Q702N8 1843 aaKnown RBP23.1■■□□□ 1.29
MCF2L-220ENST00000464800 PIK3C2BO00750 1634 aa23.1■■□□□ 1.29
MCF2L-220ENST00000464800 PTPN23Q9H3S7 1636 aa23.09■■□□□ 1.29
MCF2L-220ENST00000464800 SENP3Q9H4L4 574 aaPredicted RBP23.08■■□□□ 1.29
MCF2L-220ENST00000464800 KDM5AP29375 1690 aaKnown RBP23.06■■□□□ 1.28
MCF2L-220ENST00000464800 LTKP29376 864 aa23.05■■□□□ 1.28
MCF2L-220ENST00000464800 TXNDC2Q86VQ3 553 aa23.05■■□□□ 1.28
MCF2L-220ENST00000464800 ABCC5O15440 1437 aa23.05■■□□□ 1.28
MCF2L-220ENST00000464800 EID1Q9Y6B2 187 aa23.04■■□□□ 1.28
MCF2L-220ENST00000464800 KANK1Q14678 1352 aa23.02■■□□□ 1.28
MCF2L-220ENST00000464800 DAPK1P53355 1430 aa23.02■■□□□ 1.28
MCF2L-220ENST00000464800 LOC105371045A0A1W2PR82 267 aa23.02■■□□□ 1.28
MCF2L-220ENST00000464800 RRP7BPQ9NSQ0 103 aa23.02■■□□□ 1.28
MCF2L-220ENST00000464800 EFCAB6Q5THR3 1501 aa23.01■■□□□ 1.27
MCF2L-220ENST00000464800 TMEM2Q9UHN6 1383 aa23.01■■□□□ 1.27
MCF2L-220ENST00000464800 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23■■□□□ 1.271e-8■□□□□ 8.9
MCF2L-220ENST00000464800 LMTK2Q8IWU2 1503 aa22.98■■□□□ 1.27
MCF2L-220ENST00000464800 STAG3Q9UJ98 1225 aa22.98■■□□□ 1.27
MCF2L-220ENST00000464800 FGD6Q6ZV73 1430 aa22.96■■□□□ 1.27
MCF2L-220ENST00000464800 ANKRD30AQ9BXX3 1397 aa22.94■■□□□ 1.26
MCF2L-220ENST00000464800 APLP2Q06481 763 aa22.94■■□□□ 1.26
MCF2L-220ENST00000464800 ADGRB3O60242 1522 aa22.93■■□□□ 1.26
MCF2L-220ENST00000464800 FAM135BQ49AJ0 1406 aa22.91■■□□□ 1.26
MCF2L-220ENST00000464800 TMEM94Q12767 1356 aa22.91■■□□□ 1.26
MCF2L-220ENST00000464800 TET3O43151 1660 aa22.91■■□□□ 1.26
MCF2L-220ENST00000464800 ROBO1Q9Y6N7 1651 aa22.91■■□□□ 1.26
MCF2L-220ENST00000464800 NWD1Q149M9 1564 aa22.9■■□□□ 1.26
MCF2L-220ENST00000464800 IDI1Q13907 227 aa22.89■■□□□ 1.25
MCF2L-220ENST00000464800 NKTRP30414 1462 aaKnown RBP22.89■■□□□ 1.25
MCF2L-220ENST00000464800 NOS1P29475 1434 aa22.89■■□□□ 1.25
MCF2L-220ENST00000464800 CHIC2Q9UKJ5 165 aa22.88■■□□□ 1.25
MCF2L-220ENST00000464800 KCNA6P17658 529 aa22.87■■□□□ 1.25
MCF2L-220ENST00000464800 RGS17Q9UGC6 210 aaPredicted RBP22.86■■□□□ 1.25
MCF2L-220ENST00000464800 ADGRL2O95490 1459 aa22.85■■□□□ 1.25
MCF2L-220ENST00000464800 SLC26A8Q96RN1 970 aa22.85■■□□□ 1.25
MCF2L-220ENST00000464800 MYO5BQ9ULV0 1848 aa22.85■■□□□ 1.25
MCF2L-220ENST00000464800 PROSER2Q86WR7 435 aaPredicted RBP22.83■■□□□ 1.25
MCF2L-220ENST00000464800 RPRD2Q5VT52 1461 aaKnown RBP22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms