RNA–Protein interactions for RNA: ENST00000464750.5

U2AF1-206, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-206ENST00000464750 RNF17Q9BXT8 1623 aaKnown RBP40.42■■■■■ 4.06
U2AF1-206ENST00000464750 EIF2AK4Q9P2K8 1649 aaKnown RBP40.42■■■■■ 4.06
U2AF1-206ENST00000464750 SHANK2Q9UPX8 1470 aa40.4■■■■■ 4.06
U2AF1-206ENST00000464750 TCOF1Q13428 1488 aaKnown RBP40.39■■■■■ 4.06
U2AF1-206ENST00000464750 CEP170BQ9Y4F5 1589 aaPredicted RBP40.38■■■■■ 4.05
U2AF1-206ENST00000464750 DNMT1P26358 1616 aaKnown RBP40.38■■■■■ 4.05
U2AF1-206ENST00000464750 ABCC5O15440 1437 aa40.37■■■■■ 4.05
U2AF1-206ENST00000464750 NCOA1Q15788 1441 aa40.37■■■■■ 4.05
U2AF1-206ENST00000464750 CAMSAP1Q5T5Y3 1602 aa40.37■■■■■ 4.05
U2AF1-206ENST00000464750 DMRT2Q9Y5R5 561 aa40.36■■■■■ 4.05
U2AF1-206ENST00000464750 DUOX2Q9NRD8 1548 aa40.34■■■■■ 4.05
U2AF1-206ENST00000464750 PZPP20742 1482 aa40.33■■■■■ 4.05
U2AF1-206ENST00000464750 WASHC2CQ9Y4E1 1318 aa40.33■■■■■ 4.05
U2AF1-206ENST00000464750 DAPK1P53355 1430 aa40.33■■■■■ 4.05
U2AF1-206ENST00000464750 FBXO41Q8TF61 875 aa40.32■■■■■ 4.05
U2AF1-206ENST00000464750 ZC3H13Q5T200 1668 aaKnown RBP40.31■■■■■ 4.04
U2AF1-206ENST00000464750 PTPRTO14522 1441 aa40.29■■■■■ 4.04
U2AF1-206ENST00000464750 MROH1Q8NDA8 1641 aa40.28■■■■■ 4.04
U2AF1-206ENST00000464750 ABCC3O15438 1527 aa40.26■■■■■ 4.04
U2AF1-206ENST00000464750 KIF15Q9NS87 1388 aa40.26■■■■■ 4.04
U2AF1-206ENST00000464750 TNRQ92752 1358 aa40.23■■■■■ 4.03
U2AF1-206ENST00000464750 A2ML1A8K2U0 1454 aa40.23■■■■■ 4.03
U2AF1-206ENST00000464750 PLA2R1Q13018 1463 aa40.22■■■■■ 4.03
U2AF1-206ENST00000464750 FBXO31Q5XUX0 539 aaPredicted RBP40.22■■■■■ 4.03
U2AF1-206ENST00000464750 CEP152O94986 1710 aa40.22■■■■■ 4.03
U2AF1-206ENST00000464750 ERBINQ96RT1 1412 aa40.2■■■■■ 4.03
U2AF1-206ENST00000464750 CERKQ8TCT0 537 aa40.19■■■■■ 4.02
U2AF1-206ENST00000464750 RRP7BPQ9NSQ0 103 aa40.17■■■■■ 4.02
U2AF1-206ENST00000464750 PRDM15P57071 1507 aaPredicted RBP40.15■■■■■ 4.02
U2AF1-206ENST00000464750 NCKAP5LQ9HCH0 1330 aa40.13■■■■■ 4.01
U2AF1-206ENST00000464750 ANKRD30AQ9BXX3 1397 aa40.11■■■■■ 4.01
U2AF1-206ENST00000464750 DEPDC5O75140 1603 aa40.1■■■■■ 4.01
U2AF1-206ENST00000464750 CHIC2Q9UKJ5 165 aa40.09■■■■■ 4.01
U2AF1-206ENST00000464750 SPATA31D1Q6ZQQ2 1576 aa40.09■■■■■ 4.01
U2AF1-206ENST00000464750 NLRP1Q9C000 1473 aa40.07■■■■■ 4.01
U2AF1-206ENST00000464750 PKD2Q13563 968 aa40.07■■■■■ 4.01
U2AF1-206ENST00000464750 FAM50AQ14320 339 aaKnown RBP40.07■■■■■ 4.01
U2AF1-206ENST00000464750 POLR1AO95602 1720 aaPredicted RBP40.05■■■■■ 4
U2AF1-206ENST00000464750 ADGRL2O95490 1459 aa40.05■■■■■ 4
U2AF1-206ENST00000464750 ERVK-7P63135 1459 aa40.05■■■■■ 4
U2AF1-206ENST00000464750 CFAP65Q6ZU64 1925 aaKnown RBP40.03■■■■■ 4
U2AF1-206ENST00000464750 LTBP4Q8N2S1 1624 aa40.02■■■■■ 4
U2AF1-206ENST00000464750 UGGT1Q9NYU2 1555 aa39.99■■■■□ 3.99
U2AF1-206ENST00000464750 NEURL4Q96JN8 1562 aa39.94■■■■□ 3.98
U2AF1-206ENST00000464750 GRWD1Q9BQ67 446 aaKnown RBP eCLIP39.94■■■■□ 3.98
U2AF1-206ENST00000464750 ARHGAP31Q2M1Z3 1444 aa39.93■■■■□ 3.98
U2AF1-206ENST00000464750 KANK1Q14678 1352 aa39.93■■■■□ 3.98
U2AF1-206ENST00000464750 VWDEQ8N2E2 1590 aa39.9■■■■□ 3.98
U2AF1-206ENST00000464750 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP39.9■■■■□ 3.981e-7■■■■■ 38.4
U2AF1-206ENST00000464750 THEMISQ8N1K5 641 aaPredicted RBP39.88■■■■□ 3.97
U2AF1-206ENST00000464750 LMTK2Q8IWU2 1503 aa39.87■■■■□ 3.97
U2AF1-206ENST00000464750 ZNF335Q9H4Z2 1342 aaPredicted RBP39.87■■■■□ 3.97
U2AF1-206ENST00000464750 UBR1Q8IWV7 1749 aa39.84■■■■□ 3.97
U2AF1-206ENST00000464750 ANKRD50Q9ULJ7 1429 aa39.83■■■■□ 3.97
U2AF1-206ENST00000464750 IQSEC2Q5JU85 1478 aa39.83■■■■□ 3.97
U2AF1-206ENST00000464750 PPARGC1BQ86YN6 1023 aaKnown RBP39.82■■■■□ 3.97
U2AF1-206ENST00000464750 ANKLE2Q86XL3 938 aa39.8■■■■□ 3.96
U2AF1-206ENST00000464750 EFCAB6Q5THR3 1501 aa39.79■■■■□ 3.96
U2AF1-206ENST00000464750 MED14O60244 1454 aa39.75■■■■□ 3.95
U2AF1-206ENST00000464750 NPHP4O75161 1426 aaPredicted RBP39.74■■■■□ 3.95
U2AF1-206ENST00000464750 IQGAP1P46940 1657 aa39.73■■■■□ 3.95
U2AF1-206ENST00000464750 PIK3C2BO00750 1634 aa39.73■■■■□ 3.95
U2AF1-206ENST00000464750 ROCK1Q13464 1354 aa39.72■■■■□ 3.95
U2AF1-206ENST00000464750 UNC13BO14795 1591 aa39.7■■■■□ 3.95
U2AF1-206ENST00000464750 SYNMO15061 1565 aa39.68■■■■□ 3.94
U2AF1-206ENST00000464750 TET3O43151 1660 aa39.66■■■■□ 3.94
U2AF1-206ENST00000464750 SLIT1O75093 1534 aa39.64■■■■□ 3.94
U2AF1-206ENST00000464750 NOS1P29475 1434 aa39.63■■■■□ 3.93
U2AF1-206ENST00000464750 ARHGAP23Q9P227 1491 aa39.62■■■■□ 3.93
U2AF1-206ENST00000464750 KDM5AP29375 1690 aaKnown RBP39.62■■■■□ 3.93
U2AF1-206ENST00000464750 GCC2Q8IWJ2 1684 aa39.62■■■■□ 3.93
U2AF1-206ENST00000464750 ITGAEP38570 1179 aa39.62■■■■□ 3.93
U2AF1-206ENST00000464750 CPS1P31327 1500 aa39.61■■■■□ 3.93
U2AF1-206ENST00000464750 SCAF11Q99590 1463 aaKnown RBP39.61■■■■□ 3.93
U2AF1-206ENST00000464750 RPRD2Q5VT52 1461 aaKnown RBP39.6■■■■□ 3.93
U2AF1-206ENST00000464750 STAG3Q9UJ98 1225 aa39.53■■■■□ 3.92
U2AF1-206ENST00000464750 RRBP1Q9P2E9 1410 aaKnown RBP39.53■■■■□ 3.92
U2AF1-206ENST00000464750 ADGRB3O60242 1522 aa39.53■■■■□ 3.92
U2AF1-206ENST00000464750 IQGAP3Q86VI3 1631 aa39.53■■■■□ 3.92
U2AF1-206ENST00000464750 IDI1Q13907 227 aa39.52■■■■□ 3.92
U2AF1-206ENST00000464750 TMEM2Q9UHN6 1383 aa39.5■■■■□ 3.91
U2AF1-206ENST00000464750 LTKP29376 864 aa39.49■■■■□ 3.91
U2AF1-206ENST00000464750 TXNDC2Q86VQ3 553 aa39.49■■■■□ 3.91
U2AF1-206ENST00000464750 STRCP1A6NGW2 1772 aa39.49■■■■□ 3.91
U2AF1-206ENST00000464750 E9PCH4 1651 aa39.48■■■■□ 3.91
U2AF1-206ENST00000464750 UBAP1LF5GYI3 381 aa39.46■■■■□ 3.91
U2AF1-206ENST00000464750 EID1Q9Y6B2 187 aa39.46■■■■□ 3.91
U2AF1-206ENST00000464750 SLC52A1Q9NWF4 448 aa39.44■■■■□ 3.9
U2AF1-206ENST00000464750 MYO5BQ9ULV0 1848 aa39.41■■■■□ 3.9
U2AF1-206ENST00000464750 NUP155O75694 1391 aa39.39■■■■□ 3.9
U2AF1-206ENST00000464750 TMEM131LA2VDJ0 1609 aa39.32■■■■□ 3.89
U2AF1-206ENST00000464750 LRRC7Q96NW7 1537 aa39.32■■■■□ 3.89
U2AF1-206ENST00000464750 NAIPQ13075 1403 aa39.25■■■■□ 3.87
U2AF1-206ENST00000464750 ZFYVE9O95405 1425 aa39.24■■■■□ 3.87
U2AF1-206ENST00000464750 TOM1O60784 492 aa39.24■■■■□ 3.87
U2AF1-206ENST00000464750 SPHKAPQ2M3C7 1700 aa39.22■■■■□ 3.87
U2AF1-206ENST00000464750 RIMS2Q9UQ26 1411 aa39.21■■■■□ 3.87
U2AF1-206ENST00000464750 ALKQ9UM73 1620 aa39.21■■■■□ 3.87
U2AF1-206ENST00000464750 SCAF1Q9H7N4 1312 aaKnown RBP39.19■■■■□ 3.86
U2AF1-206ENST00000464750 XIRP1Q702N8 1843 aaKnown RBP39.19■■■■□ 3.86
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms