RNA–Protein interactions for RNA: ENST00000464553.2

SSNA1-204, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSNA1, Length 723 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-204ENST00000464553 KIF15Q9NS87 1388 aa25.05■■□□□ 1.6
SSNA1-204ENST00000464553 PTPRKQ15262 1439 aa25.04■■□□□ 1.6
SSNA1-204ENST00000464553 FAM50AQ14320 339 aaKnown RBP25.04■■□□□ 1.6
SSNA1-204ENST00000464553 RRP7BPQ9NSQ0 103 aa25.04■■□□□ 1.6
SSNA1-204ENST00000464553 EIF2AK4Q9P2K8 1649 aaKnown RBP25.04■■□□□ 1.6
SSNA1-204ENST00000464553 CLTCQ00610 1675 aaKnown RBP25.04■■□□□ 1.6
SSNA1-204ENST00000464553 DMRT2Q9Y5R5 561 aa25.03■■□□□ 1.6
SSNA1-204ENST00000464553 ERBINQ96RT1 1412 aa25.03■■□□□ 1.6
SSNA1-204ENST00000464553 KDM5DQ9BY66 1539 aa25.02■■□□□ 1.6
SSNA1-204ENST00000464553 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.01■■□□□ 1.59
SSNA1-204ENST00000464553 NCOA1Q15788 1441 aa25.01■■□□□ 1.59
SSNA1-204ENST00000464553 CROCC2H7BZ55 1655 aa25.01■■□□□ 1.59
SSNA1-204ENST00000464553 RNF17Q9BXT8 1623 aaKnown RBP24.99■■□□□ 1.59
SSNA1-204ENST00000464553 CHIC2Q9UKJ5 165 aa24.98■■□□□ 1.59
SSNA1-204ENST00000464553 ADGRL2O95490 1459 aa24.97■■□□□ 1.59
SSNA1-204ENST00000464553 PZPP20742 1482 aa24.96■■□□□ 1.59
SSNA1-204ENST00000464553 KANK1Q14678 1352 aa24.91■■□□□ 1.58
SSNA1-204ENST00000464553 TNRQ92752 1358 aa24.91■■□□□ 1.58
SSNA1-204ENST00000464553 ZC3H13Q5T200 1668 aaKnown RBP24.91■■□□□ 1.58
SSNA1-204ENST00000464553 FBXO31Q5XUX0 539 aaPredicted RBP24.9■■□□□ 1.58
SSNA1-204ENST00000464553 ABCC3O15438 1527 aa24.9■■□□□ 1.58
SSNA1-204ENST00000464553 ROCK1Q13464 1354 aa24.9■■□□□ 1.58
SSNA1-204ENST00000464553 ARHGAP31Q2M1Z3 1444 aa24.87■■□□□ 1.57
SSNA1-204ENST00000464553 MROH1Q8NDA8 1641 aa24.87■■□□□ 1.57
SSNA1-204ENST00000464553 PPARGC1BQ86YN6 1023 aaKnown RBP24.87■■□□□ 1.57
SSNA1-204ENST00000464553 PTPRTO14522 1441 aa24.86■■□□□ 1.57
SSNA1-204ENST00000464553 A2ML1A8K2U0 1454 aa24.86■■□□□ 1.57
SSNA1-204ENST00000464553 PRDM15P57071 1507 aaPredicted RBP24.86■■□□□ 1.57
SSNA1-204ENST00000464553 ANKRD50Q9ULJ7 1429 aa24.86■■□□□ 1.57
SSNA1-204ENST00000464553 PKD2Q13563 968 aa24.85■■□□□ 1.57
SSNA1-204ENST00000464553 PLA2R1Q13018 1463 aa24.83■■□□□ 1.57
SSNA1-204ENST00000464553 NLRP1Q9C000 1473 aa24.83■■□□□ 1.57
SSNA1-204ENST00000464553 ZNF142P52746 1687 aaPredicted RBP24.83■■□□□ 1.57
SSNA1-204ENST00000464553 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.83■■□□□ 1.57
SSNA1-204ENST00000464553 CEP170BQ9Y4F5 1589 aaPredicted RBP24.83■■□□□ 1.57
SSNA1-204ENST00000464553 DEPDC5O75140 1603 aa24.83■■□□□ 1.56
SSNA1-204ENST00000464553 MYO3AQ8NEV4 1616 aa24.83■■□□□ 1.56
SSNA1-204ENST00000464553 THEMISQ8N1K5 641 aaPredicted RBP24.82■■□□□ 1.56
SSNA1-204ENST00000464553 RRBP1Q9P2E9 1410 aaKnown RBP24.81■■□□□ 1.56
SSNA1-204ENST00000464553 STRCQ7RTU9 1775 aa24.81■■□□□ 1.56
SSNA1-204ENST00000464553 LMTK2Q8IWU2 1503 aa24.8■■□□□ 1.56
SSNA1-204ENST00000464553 CAMSAP1Q5T5Y3 1602 aa24.79■■□□□ 1.56
SSNA1-204ENST00000464553 SPATA31D1Q6ZQQ2 1576 aa24.79■■□□□ 1.56
SSNA1-204ENST00000464553 VWDEQ8N2E2 1590 aa24.77■■□□□ 1.56
SSNA1-204ENST00000464553 ERVK-7P63135 1459 aa24.77■■□□□ 1.56
SSNA1-204ENST00000464553 NCKAP5LQ9HCH0 1330 aa24.73■■□□□ 1.55
SSNA1-204ENST00000464553 ITGAEP38570 1179 aa24.72■■□□□ 1.55
SSNA1-204ENST00000464553 ANKLE2Q86XL3 938 aa24.72■■□□□ 1.55
SSNA1-204ENST00000464553 CEP152O94986 1710 aa24.72■■□□□ 1.55
SSNA1-204ENST00000464553 FBXO41Q8TF61 875 aa24.7■■□□□ 1.54
SSNA1-204ENST00000464553 UGGT1Q9NYU2 1555 aa24.7■■□□□ 1.54
SSNA1-204ENST00000464553 CERKQ8TCT0 537 aa24.69■■□□□ 1.54
SSNA1-204ENST00000464553 ILDR1Q86SU0 546 aaPredicted RBP24.68■■□□□ 1.54
SSNA1-204ENST00000464553 RPRD2Q5VT52 1461 aaKnown RBP24.67■■□□□ 1.54
SSNA1-204ENST00000464553 SLC52A1Q9NWF4 448 aa24.66■■□□□ 1.54
SSNA1-204ENST00000464553 NOS1P29475 1434 aa24.63■■□□□ 1.53
SSNA1-204ENST00000464553 EFCAB6Q5THR3 1501 aa24.63■■□□□ 1.53
SSNA1-204ENST00000464553 UNC13BO14795 1591 aa24.62■■□□□ 1.53
SSNA1-204ENST00000464553 MED14O60244 1454 aa24.6■■□□□ 1.53
SSNA1-204ENST00000464553 NUP155O75694 1391 aa24.6■■□□□ 1.53
SSNA1-204ENST00000464553 IDI1Q13907 227 aa24.6■■□□□ 1.53
SSNA1-204ENST00000464553 TET3O43151 1660 aa24.57■■□□□ 1.52
SSNA1-204ENST00000464553 STAG3Q9UJ98 1225 aa24.57■■□□□ 1.52
SSNA1-204ENST00000464553 CFAP65Q6ZU64 1925 aaKnown RBP24.56■■□□□ 1.52
SSNA1-204ENST00000464553 NAIPQ13075 1403 aa24.55■■□□□ 1.52
SSNA1-204ENST00000464553 EID1Q9Y6B2 187 aa24.55■■□□□ 1.52
SSNA1-204ENST00000464553 NPHP4O75161 1426 aaPredicted RBP24.53■■□□□ 1.52
SSNA1-204ENST00000464553 KDM5AP29375 1690 aaKnown RBP24.53■■□□□ 1.52
SSNA1-204ENST00000464553 IQSEC2Q5JU85 1478 aa24.53■■□□□ 1.52
SSNA1-204ENST00000464553 ARHGAP23Q9P227 1491 aa24.53■■□□□ 1.52
SSNA1-204ENST00000464553 SLIT1O75093 1534 aa24.53■■□□□ 1.52
SSNA1-204ENST00000464553 IQGAP3Q86VI3 1631 aa24.53■■□□□ 1.52
SSNA1-204ENST00000464553 LTBP4Q8N2S1 1624 aa24.53■■□□□ 1.52
SSNA1-204ENST00000464553 HFM1A2PYH4 1435 aa24.52■■□□□ 1.52
SSNA1-204ENST00000464553 UBR1Q8IWV7 1749 aa24.52■■□□□ 1.52
SSNA1-204ENST00000464553 TXNDC2Q86VQ3 553 aa24.52■■□□□ 1.52
SSNA1-204ENST00000464553 TMEM2Q9UHN6 1383 aa24.52■■□□□ 1.52
SSNA1-204ENST00000464553 POLR1AO95602 1720 aaPredicted RBP24.52■■□□□ 1.52
SSNA1-204ENST00000464553 NEURL4Q96JN8 1562 aa24.51■■□□□ 1.51
SSNA1-204ENST00000464553 GCC2Q8IWJ2 1684 aa24.51■■□□□ 1.51
SSNA1-204ENST00000464553 HDGFP51858 240 aaKnown RBP24.5■■□□□ 1.51
SSNA1-204ENST00000464553 ZNF335Q9H4Z2 1342 aaPredicted RBP24.5■■□□□ 1.51
SSNA1-204ENST00000464553 ACIN1Q9UKV3 1341 aaKnown RBP24.5■■□□□ 1.51
SSNA1-204ENST00000464553 SYNMO15061 1565 aa24.5■■□□□ 1.51
SSNA1-204ENST00000464553 SCAF11Q99590 1463 aaKnown RBP24.48■■□□□ 1.51
SSNA1-204ENST00000464553 PIK3C2BO00750 1634 aa24.47■■□□□ 1.51
SSNA1-204ENST00000464553 LTKP29376 864 aa24.47■■□□□ 1.51
SSNA1-204ENST00000464553 E9PCH4 1651 aa24.42■■□□□ 1.5
SSNA1-204ENST00000464553 ADGRB3O60242 1522 aa24.41■■□□□ 1.5
SSNA1-204ENST00000464553 CPS1P31327 1500 aa24.4■■□□□ 1.5
SSNA1-204ENST00000464553 IQGAP1P46940 1657 aa24.4■■□□□ 1.5
SSNA1-204ENST00000464553 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.39■■□□□ 1.49
SSNA1-204ENST00000464553 TRIM52Q96A61 297 aa24.39■■□□□ 1.49
SSNA1-204ENST00000464553 TMEM131LA2VDJ0 1609 aa24.33■■□□□ 1.49
SSNA1-204ENST00000464553 SLC4A1APQ9BWU0 796 aaKnown RBP24.33■■□□□ 1.49
SSNA1-204ENST00000464553 CHGAP10645 457 aaKnown RBP24.32■■□□□ 1.48
SSNA1-204ENST00000464553 ZFYVE9O95405 1425 aa24.32■■□□□ 1.48
SSNA1-204ENST00000464553 RIMS2Q9UQ26 1411 aa24.31■■□□□ 1.48
SSNA1-204ENST00000464553 PLEKHG1Q9ULL1 1385 aa24.29■■□□□ 1.48
SSNA1-204ENST00000464553 PPP1R15AO75807 674 aaPredicted RBP24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms