RNA–Protein interactions for RNA: ENST00000464480.1

HMGXB4-205, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-205ENST00000464480 PCDHGA10Q9Y5H3 936 aa7.77□□□□□ -1.17
HMGXB4-205ENST00000464480 FAM205CA6NFA0 338 aa7.76□□□□□ -1.17
HMGXB4-205ENST00000464480 NUDT7P0C024 238 aa7.76□□□□□ -1.17
HMGXB4-205ENST00000464480 ARSIQ5FYB1 569 aa7.76□□□□□ -1.17
HMGXB4-205ENST00000464480 RBM33Q96EV2 1170 aaKnown RBP7.76□□□□□ -1.17
HMGXB4-205ENST00000464480 KDM4FA0A1W2PPD8 638 aa7.75□□□□□ -1.17
HMGXB4-205ENST00000464480 TRIM66O15016 1216 aa7.75□□□□□ -1.17
HMGXB4-205ENST00000464480 FOSBP53539 338 aa7.75□□□□□ -1.17
HMGXB4-205ENST00000464480 ZNF454Q8N9F8 522 aa7.75□□□□□ -1.17
HMGXB4-205ENST00000464480 CCDC102AQ96A19 550 aa7.75□□□□□ -1.17
HMGXB4-205ENST00000464480 PDE4DQ08499 809 aa7.74□□□□□ -1.17
HMGXB4-205ENST00000464480 CDAN1Q8IWY9 1227 aa7.74□□□□□ -1.17
HMGXB4-205ENST00000464480 CDHR5Q9HBB8 845 aa7.74□□□□□ -1.17
HMGXB4-205ENST00000464480 PSDA5PKW4 1024 aaPredicted RBP7.73□□□□□ -1.17
HMGXB4-205ENST00000464480 IRF6O14896 467 aa7.73□□□□□ -1.17
HMGXB4-205ENST00000464480 ZDHHC16Q969W1 377 aa7.73□□□□□ -1.17
HMGXB4-205ENST00000464480 HS3ST6Q96QI5 342 aa7.73□□□□□ -1.17
HMGXB4-205ENST00000464480 DAXXQ9UER7 740 aaPredicted RBP7.73□□□□□ -1.17
HMGXB4-205ENST00000464480 TSR1Q2NL82 804 aaKnown RBP7.72□□□□□ -1.17
HMGXB4-205ENST00000464480 CERKQ8TCT0 537 aa7.72□□□□□ -1.17
HMGXB4-205ENST00000464480 KHSRPQ92945 711 aaKnown RBP eCLIP7.72□□□□□ -1.17
HMGXB4-205ENST00000464480 FECHP22830 423 aa7.71□□□□□ -1.18
HMGXB4-205ENST00000464480 VARS2Q5ST30 1063 aaKnown RBP7.71□□□□□ -1.18
HMGXB4-205ENST00000464480 GPBP1L1Q9HC44 474 aaPredicted RBP7.71□□□□□ -1.18
HMGXB4-205ENST00000464480 KDM4CQ9H3R0 1056 aa7.7□□□□□ -1.18
HMGXB4-205ENST00000464480 NPDC1Q9NQX5 325 aaPredicted RBP7.7□□□□□ -1.18
HMGXB4-205ENST00000464480 AMHR2Q16671 573 aa7.69□□□□□ -1.18
HMGXB4-205ENST00000464480 PPP4R3BQ5MIZ7 849 aa7.69□□□□□ -1.18
HMGXB4-205ENST00000464480 C6orf132Q5T0Z8 1188 aa7.69□□□□□ -1.18
HMGXB4-205ENST00000464480 LHX6Q9UPM6 363 aa7.68□□□□□ -1.18
HMGXB4-205ENST00000464480 GTF3C3Q9Y5Q9 886 aa7.68□□□□□ -1.18
HMGXB4-205ENST00000464480 ADAM33Q9BZ11 813 aa7.67□□□□□ -1.18
HMGXB4-205ENST00000464480 RBM27Q9P2N5 1060 aaKnown RBP7.67□□□□□ -1.18
HMGXB4-205ENST00000464480 TTLL12Q14166 644 aaPredicted RBP7.66□□□□□ -1.18
HMGXB4-205ENST00000464480 ZNF687Q8N1G0 1237 aa7.66□□□□□ -1.18
HMGXB4-205ENST00000464480 PARP9Q8IXQ6 854 aa7.65□□□□□ -1.18
HMGXB4-205ENST00000464480 KCNH8Q96L42 1107 aa7.65□□□□□ -1.18
HMGXB4-205ENST00000464480 PBX2P40425 430 aa7.64□□□□□ -1.19
HMGXB4-205ENST00000464480 PADI6Q6TGC4 694 aa7.64□□□□□ -1.19
HMGXB4-205ENST00000464480 DDRGK1Q96HY6 314 aa7.63□□□□□ -1.19
HMGXB4-205ENST00000464480 BCL2L12Q9HB09 334 aa7.63□□□□□ -1.19
HMGXB4-205ENST00000464480 OATP04181 439 aa7.62□□□□□ -1.19
HMGXB4-205ENST00000464480 PTPREP23469 700 aa7.62□□□□□ -1.19
HMGXB4-205ENST00000464480 IL27Q8NEV9 243 aa7.62□□□□□ -1.19
HMGXB4-205ENST00000464480 POTEB3A0JP26 581 aa7.61□□□□□ -1.19
HMGXB4-205ENST00000464480 PPP1R3GB7ZBB8 358 aa7.61□□□□□ -1.19
HMGXB4-205ENST00000464480 CLCN1P35523 988 aa7.61□□□□□ -1.19
HMGXB4-205ENST00000464480 PRSS12P56730 875 aa7.61□□□□□ -1.19
HMGXB4-205ENST00000464480 POTEBQ6S5H4 581 aa7.61□□□□□ -1.19
HMGXB4-205ENST00000464480 GIGYF2Q6Y7W6 1299 aaKnown RBP7.61□□□□□ -1.19
HMGXB4-205ENST00000464480 ERICH6Q7L0X2 663 aa7.61□□□□□ -1.19
HMGXB4-205ENST00000464480 TTC13Q8NBP0 860 aa7.61□□□□□ -1.19
HMGXB4-205ENST00000464480 CDCA7LQ96GN5 454 aa7.61□□□□□ -1.19
HMGXB4-205ENST00000464480 PLSCR2Q9NRY7 297 aa7.61□□□□□ -1.19
HMGXB4-205ENST00000464480 METTL3Q86U44 580 aaKnown RBP7.6□□□□□ -1.19
HMGXB4-205ENST00000464480 GPCPD1Q9NPB8 672 aa7.6□□□□□ -1.19
HMGXB4-205ENST00000464480 ADGRG1Q9Y653 693 aa7.6□□□□□ -1.19
HMGXB4-205ENST00000464480 RBM46Q8TBY0 533 aaKnown RBP7.59□□□□□ -1.19
HMGXB4-205ENST00000464480 MDM2Q00987 491 aaPredicted RBP7.58□□□□□ -1.2
HMGXB4-205ENST00000464480 PXYLP1Q8TE99 480 aa7.58□□□□□ -1.2
HMGXB4-205ENST00000464480 FAM117AQ9C073 453 aa7.58□□□□□ -1.2
HMGXB4-205ENST00000464480 COL9A1P20849 921 aa7.57□□□□□ -1.2
HMGXB4-205ENST00000464480 FAM161AQ3B820 660 aa7.57□□□□□ -1.2
HMGXB4-205ENST00000464480 NBPF26B4DH59 902 aa7.56□□□□□ -1.2
HMGXB4-205ENST00000464480 ARHGAP33O14559 1287 aa7.56□□□□□ -1.2
HMGXB4-205ENST00000464480 PHOX2BQ99453 314 aa7.56□□□□□ -1.2
HMGXB4-205ENST00000464480 KRTAP3-3Q9BYR6 98 aa7.56□□□□□ -1.2
HMGXB4-205ENST00000464480 KRTAP3-2Q9BYR7 98 aa7.56□□□□□ -1.2
HMGXB4-205ENST00000464480 LSM11P83369 360 aaKnown RBP eCLIP7.55□□□□□ -1.2
HMGXB4-205ENST00000464480 KCNK17Q96T54 332 aa7.55□□□□□ -1.2
HMGXB4-205ENST00000464480 TMUB1Q9BVT8 246 aa7.55□□□□□ -1.2
HMGXB4-205ENST00000464480 REPIN1Q9BWE0 567 aaKnown RBP7.55□□□□□ -1.2
HMGXB4-205ENST00000464480 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.54□□□□□ -1.2
HMGXB4-205ENST00000464480 PLEKHG3A1L390 1219 aa7.54□□□□□ -1.2
HMGXB4-205ENST00000464480 TRIM6-TRIM34B2RNG4 842 aa7.54□□□□□ -1.2
HMGXB4-205ENST00000464480 MS4A1P11836 297 aa7.54□□□□□ -1.2
HMGXB4-205ENST00000464480 ANKRD13DQ6ZTN6 518 aa7.54□□□□□ -1.2
HMGXB4-205ENST00000464480 SSTR3P32745 418 aaPredicted RBP7.53□□□□□ -1.2
HMGXB4-205ENST00000464480 PACS2Q86VP3 889 aa7.53□□□□□ -1.2
HMGXB4-205ENST00000464480 TSKSQ9UJT2 592 aa7.53□□□□□ -1.2
HMGXB4-205ENST00000464480 TIMELESSQ9UNS1 1208 aa7.53□□□□□ -1.2
HMGXB4-205ENST00000464480 ONECUT3O60422 494 aaPredicted RBP7.52□□□□□ -1.21
HMGXB4-205ENST00000464480 SPNS2Q8IVW8 549 aa7.52□□□□□ -1.21
HMGXB4-205ENST00000464480 NLRP7Q8WX94 980 aa7.52□□□□□ -1.21
HMGXB4-205ENST00000464480 FAM217BQ9NTX9 383 aaPredicted RBP7.52□□□□□ -1.21
HMGXB4-205ENST00000464480 FAM198AQ9UFP1 575 aa7.52□□□□□ -1.21
HMGXB4-205ENST00000464480 PNMA3Q9UL41 463 aa7.52□□□□□ -1.21
HMGXB4-205ENST00000464480 DNAJB2P25686 324 aa7.51□□□□□ -1.21
HMGXB4-205ENST00000464480 NUDT18Q6ZVK8 323 aa7.51□□□□□ -1.21
HMGXB4-205ENST00000464480 STAC3Q96MF2 364 aa7.51□□□□□ -1.21
HMGXB4-205ENST00000464480 EYA1Q99502 592 aa7.51□□□□□ -1.21
HMGXB4-205ENST00000464480 GOPCQ9HD26 462 aa7.51□□□□□ -1.21
HMGXB4-205ENST00000464480 RCCD1A6NED2 376 aa7.5□□□□□ -1.21
HMGXB4-205ENST00000464480 TK2O00142 265 aa7.5□□□□□ -1.21
HMGXB4-205ENST00000464480 PROX2Q3B8N5 592 aa7.5□□□□□ -1.21
HMGXB4-205ENST00000464480 C14orf37Q86TY3 774 aa7.5□□□□□ -1.21
HMGXB4-205ENST00000464480 TATDN2Q93075 761 aa7.5□□□□□ -1.21
HMGXB4-205ENST00000464480 ZBED2Q9BTP6 218 aa7.5□□□□□ -1.21
HMGXB4-205ENST00000464480 BEGAINQ9BUH8 593 aa7.5□□□□□ -1.21
HMGXB4-205ENST00000464480 AXIN2Q9Y2T1 843 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms