RNA–Protein interactions for RNA: ENST00000464279.5

SNX17-205, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 549 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-205ENST00000464279 STRCP1A6NGW2 1772 aa20.9■□□□□ 0.94
SNX17-205ENST00000464279 UPF1Q92900 1129 aaKnown RBP eCLIP20.88■□□□□ 0.93
SNX17-205ENST00000464279 FAM135AQ9P2D6 1515 aa20.88■□□□□ 0.93
SNX17-205ENST00000464279 ZNF777Q9ULD5 760 aaPredicted RBP20.87■□□□□ 0.93
SNX17-205ENST00000464279 UGGT1Q9NYU2 1555 aa20.86■□□□□ 0.93
SNX17-205ENST00000464279 FBXO31Q5XUX0 539 aaPredicted RBP20.86■□□□□ 0.93
SNX17-205ENST00000464279 PZPP20742 1482 aa20.86■□□□□ 0.93
SNX17-205ENST00000464279 NLRP1Q9C000 1473 aa20.86■□□□□ 0.93
SNX17-205ENST00000464279 CDC42BPAQ5VT25 1732 aa20.85■□□□□ 0.93
SNX17-205ENST00000464279 EEA1Q15075 1411 aa20.85■□□□□ 0.93
SNX17-205ENST00000464279 FAM135BQ49AJ0 1406 aa20.85■□□□□ 0.93
SNX17-205ENST00000464279 HNRNPMP52272 730 aaKnown RBP eCLIP20.83■□□□□ 0.93
SNX17-205ENST00000464279 LRRIQ1Q96JM4 1722 aa20.81■□□□□ 0.92
SNX17-205ENST00000464279 ARHGAP35Q9NRY4 1499 aa20.8■□□□□ 0.92
SNX17-205ENST00000464279 ADGBQ8N7X0 1667 aa20.8■□□□□ 0.92
SNX17-205ENST00000464279 MIA2Q96PC5 1412 aa20.79■□□□□ 0.92
SNX17-205ENST00000464279 KIAA1107Q9UPP5 1409 aa20.79■□□□□ 0.92
SNX17-205ENST00000464279 KDM5DQ9BY66 1539 aa20.78■□□□□ 0.92
SNX17-205ENST00000464279 PLEKHH2Q8IVE3 1493 aa20.78■□□□□ 0.92
SNX17-205ENST00000464279 CCDC18Q5T9S5 1454 aa20.76■□□□□ 0.91
SNX17-205ENST00000464279 GPATCH8Q9UKJ3 1502 aaKnown RBP20.73■□□□□ 0.91
SNX17-205ENST00000464279 ZC3H13Q5T200 1668 aaKnown RBP20.73■□□□□ 0.91
SNX17-205ENST00000464279 SRCAPQ6ZRS2 3230 aa20.71■□□□□ 0.91
SNX17-205ENST00000464279 ROBO1Q9Y6N7 1651 aa20.71■□□□□ 0.91
SNX17-205ENST00000464279 TRIM52Q96A61 297 aa20.71■□□□□ 0.91
SNX17-205ENST00000464279 XIRP1Q702N8 1843 aaKnown RBP20.7■□□□□ 0.9
SNX17-205ENST00000464279 WASHC2CQ9Y4E1 1318 aa20.7■□□□□ 0.9
SNX17-205ENST00000464279 DHX29Q7Z478 1369 aaKnown RBP20.7■□□□□ 0.9
SNX17-205ENST00000464279 JCADQ9P266 1359 aa20.68■□□□□ 0.9
SNX17-205ENST00000464279 KIF3BO15066 747 aa20.67■□□□□ 0.9
SNX17-205ENST00000464279 CFDP1Q9UEE9 299 aaPredicted RBP20.67■□□□□ 0.9
SNX17-205ENST00000464279 SCAF11Q99590 1463 aaKnown RBP20.67■□□□□ 0.9
SNX17-205ENST00000464279 ZNF772Q68DY9 489 aaPredicted RBP20.66■□□□□ 0.9
SNX17-205ENST00000464279 LRRC9Q6ZRR7 1453 aa20.66■□□□□ 0.9
SNX17-205ENST00000464279 CASKIN1Q8WXD9 1431 aa20.64■□□□□ 0.89
SNX17-205ENST00000464279 RTEL1-TNFRSF6BF6WH68 1400 aa20.63■□□□□ 0.89
SNX17-205ENST00000464279 TMEM94Q12767 1356 aa20.63■□□□□ 0.89
SNX17-205ENST00000464279 UBTFP17480 764 aaKnown RBP20.62■□□□□ 0.89
SNX17-205ENST00000464279 MEX3CQ5U5Q3 659 aaKnown RBP20.6■□□□□ 0.89
SNX17-205ENST00000464279 CCNB3Q8WWL7 1395 aa20.59■□□□□ 0.89
SNX17-205ENST00000464279 CDK12Q9NYV4 1490 aaPredicted RBP20.59■□□□□ 0.89
SNX17-205ENST00000464279 LRP6O75581 1613 aa20.59■□□□□ 0.89
SNX17-205ENST00000464279 PHLPP1O60346 1717 aa20.58■□□□□ 0.89
SNX17-205ENST00000464279 RXRBP28702 533 aa20.58■□□□□ 0.89
SNX17-205ENST00000464279 MAP3K1Q13233 1512 aa20.58■□□□□ 0.88
SNX17-205ENST00000464279 SPATA31A6Q5VVP1 1343 aa20.56■□□□□ 0.88
SNX17-205ENST00000464279 MBD5Q9P267 1494 aa20.56■□□□□ 0.88
SNX17-205ENST00000464279 LTKP29376 864 aa20.55■□□□□ 0.88
SNX17-205ENST00000464279 TXNDC2Q86VQ3 553 aa20.55■□□□□ 0.88
SNX17-205ENST00000464279 EHMT2Q96KQ7 1210 aa20.55■□□□□ 0.88
SNX17-205ENST00000464279 ERVK-7P63135 1459 aa20.55■□□□□ 0.88
SNX17-205ENST00000464279 ARHGAP23Q9P227 1491 aa20.55■□□□□ 0.88
SNX17-205ENST00000464279 SLIT1O75093 1534 aa20.54■□□□□ 0.88
SNX17-205ENST00000464279 UBR1Q8IWV7 1749 aa20.54■□□□□ 0.88
SNX17-205ENST00000464279 NCOA2Q15596 1464 aa20.53■□□□□ 0.88
SNX17-205ENST00000464279 COL16A1Q07092 1604 aaPredicted RBP20.52■□□□□ 0.88
SNX17-205ENST00000464279 FGD6Q6ZV73 1430 aa20.52■□□□□ 0.87
SNX17-205ENST00000464279 ZNF644Q9H582 1327 aaPredicted RBP20.52■□□□□ 0.87
SNX17-205ENST00000464279 FYCO1Q9BQS8 1478 aa20.51■□□□□ 0.87
SNX17-205ENST00000464279 CHIC1Q5VXU3 224 aa20.51■□□□□ 0.87
SNX17-205ENST00000464279 EID1Q9Y6B2 187 aa20.51■□□□□ 0.87
SNX17-205ENST00000464279 PROSER2Q86WR7 435 aaPredicted RBP20.5■□□□□ 0.87
SNX17-205ENST00000464279 MSH6P52701 1360 aa20.49■□□□□ 0.87
SNX17-205ENST00000464279 ABCC3O15438 1527 aa20.49■□□□□ 0.87
SNX17-205ENST00000464279 KCNA6P17658 529 aa20.49■□□□□ 0.87
SNX17-205ENST00000464279 PRDM15P57071 1507 aaPredicted RBP20.48■□□□□ 0.87
SNX17-205ENST00000464279 SLAIN2Q9P270 581 aa20.48■□□□□ 0.87
SNX17-205ENST00000464279 TIAM1Q13009 1591 aa20.47■□□□□ 0.87
SNX17-205ENST00000464279 RBM33Q96EV2 1170 aaKnown RBP20.47■□□□□ 0.87
SNX17-205ENST00000464279 NKTRP30414 1462 aaKnown RBP20.46■□□□□ 0.87
SNX17-205ENST00000464279 CCDC141Q6ZP82 1450 aa20.45■□□□□ 0.86
SNX17-205ENST00000464279 FOXD1Q16676 465 aa20.45■□□□□ 0.86
SNX17-205ENST00000464279 ZRANB1Q9UGI0 708 aa20.43■□□□□ 0.86
SNX17-205ENST00000464279 RGS12O14924 1447 aa20.43■□□□□ 0.86
SNX17-205ENST00000464279 SHPRHQ149N8 1683 aa20.41■□□□□ 0.86
SNX17-205ENST00000464279 NWD1Q149M9 1564 aa20.4■□□□□ 0.86
SNX17-205ENST00000464279 TMEM2Q9UHN6 1383 aa20.4■□□□□ 0.86
SNX17-205ENST00000464279 MTUS2Q5JR59 1369 aa20.39■□□□□ 0.85
SNX17-205ENST00000464279 CAMSAP2Q08AD1 1489 aa20.38■□□□□ 0.85
SNX17-205ENST00000464279 AFF2P51816 1311 aa20.38■□□□□ 0.85
SNX17-205ENST00000464279 SETBP1Q9Y6X0 1596 aa20.38■□□□□ 0.85
SNX17-205ENST00000464279 NUTM2BA6NNL0 878 aaPredicted RBP20.37■□□□□ 0.85
SNX17-205ENST00000464279 NUTM2EB1AL46 878 aaPredicted RBP20.37■□□□□ 0.85
SNX17-205ENST00000464279 NUTM2DQ5VT03 806 aaPredicted RBP20.37■□□□□ 0.85
SNX17-205ENST00000464279 NUTM2AQ8IVF1 878 aaPredicted RBP20.37■□□□□ 0.85
SNX17-205ENST00000464279 AHDC1Q5TGY3 1603 aaPredicted RBP20.36■□□□□ 0.85
SNX17-205ENST00000464279 SLC26A8Q96RN1 970 aa20.36■□□□□ 0.85
SNX17-205ENST00000464279 ATAD2Q6PL18 1390 aa20.34■□□□□ 0.85
SNX17-205ENST00000464279 RSPH4AQ5TD94 716 aa20.34■□□□□ 0.85
SNX17-205ENST00000464279 TET3O43151 1660 aa20.33■□□□□ 0.85
SNX17-205ENST00000464279 KDM5AP29375 1690 aaKnown RBP20.33■□□□□ 0.85
SNX17-205ENST00000464279 RBM6P78332 1123 aaKnown RBP20.33■□□□□ 0.85
SNX17-205ENST00000464279 STAG3Q9UJ98 1225 aa20.31■□□□□ 0.84
SNX17-205ENST00000464279 PIK3C2BO00750 1634 aa20.31■□□□□ 0.84
SNX17-205ENST00000464279 MROH1Q8NDA8 1641 aa20.31■□□□□ 0.84
SNX17-205ENST00000464279 CEP152O94986 1710 aa20.3■□□□□ 0.84
SNX17-205ENST00000464279 EFCAB6Q5THR3 1501 aa20.29■□□□□ 0.84
SNX17-205ENST00000464279 EIF2AK4Q9P2K8 1649 aaKnown RBP20.29■□□□□ 0.84
SNX17-205ENST00000464279 QTRT2Q9H974 415 aaKnown RBP20.28■□□□□ 0.84
SNX17-205ENST00000464279 ARHGAP31Q2M1Z3 1444 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms