RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 UNC13BO14795 1591 aa20.93■□□□□ 0.94
COL5A1-205ENST00000464187 A2MP01023 1474 aa20.93■□□□□ 0.94
COL5A1-205ENST00000464187 PKD2Q13563 968 aa20.92■□□□□ 0.94
COL5A1-205ENST00000464187 KIF3BO15066 747 aa20.91■□□□□ 0.94
COL5A1-205ENST00000464187 MAGI2Q86UL8 1455 aa20.9■□□□□ 0.94
COL5A1-205ENST00000464187 COL17A1Q9UMD9 1497 aaPredicted RBP20.9■□□□□ 0.94
COL5A1-205ENST00000464187 FAM135AQ9P2D6 1515 aa20.9■□□□□ 0.94
COL5A1-205ENST00000464187 ABCA6Q8N139 1617 aa20.9■□□□□ 0.94
COL5A1-205ENST00000464187 ZMYM4Q5VZL5 1548 aa20.89■□□□□ 0.94
COL5A1-205ENST00000464187 YEATS2Q9ULM3 1422 aa20.88■□□□□ 0.93
COL5A1-205ENST00000464187 ANKRD30BQ9BXX2 1392 aa20.88■□□□□ 0.93
COL5A1-205ENST00000464187 DIP2CQ9Y2E4 1556 aa20.86■□□□□ 0.93
COL5A1-205ENST00000464187 EIF2AK4Q9P2K8 1649 aaKnown RBP20.86■□□□□ 0.93
COL5A1-205ENST00000464187 MIER1Q8N108 512 aa20.86■□□□□ 0.93
COL5A1-205ENST00000464187 IQGAP3Q86VI3 1631 aa20.85■□□□□ 0.93
COL5A1-205ENST00000464187 TIMELESSQ9UNS1 1208 aa20.83■□□□□ 0.93
COL5A1-205ENST00000464187 DEPDC5O75140 1603 aa20.83■□□□□ 0.93
COL5A1-205ENST00000464187 KANK1Q14678 1352 aa20.81■□□□□ 0.92
COL5A1-205ENST00000464187 PRDM15P57071 1507 aaPredicted RBP20.8■□□□□ 0.92
COL5A1-205ENST00000464187 TONSLQ96HA7 1378 aa20.8■□□□□ 0.92
COL5A1-205ENST00000464187 MROH1Q8NDA8 1641 aa20.79■□□□□ 0.92
COL5A1-205ENST00000464187 GGT6Q6P531 493 aa20.78■□□□□ 0.92
COL5A1-205ENST00000464187 ATP10AO60312 1499 aa20.78■□□□□ 0.92
COL5A1-205ENST00000464187 SCAF1Q9H7N4 1312 aaKnown RBP20.78■□□□□ 0.92
COL5A1-205ENST00000464187 VWDEQ8N2E2 1590 aa20.77■□□□□ 0.92
COL5A1-205ENST00000464187 RPRD2Q5VT52 1461 aaKnown RBP20.76■□□□□ 0.91
COL5A1-205ENST00000464187 RNF17Q9BXT8 1623 aaKnown RBP20.76■□□□□ 0.91
COL5A1-205ENST00000464187 CENPBP07199 599 aaPredicted RBP20.76■□□□□ 0.91
COL5A1-205ENST00000464187 BCORL1Q5H9F3 1711 aa20.75■□□□□ 0.91
COL5A1-205ENST00000464187 ARHGEF40Q8TER5 1519 aa20.72■□□□□ 0.91
COL5A1-205ENST00000464187 REREQ9P2R6 1566 aa20.71■□□□□ 0.91
COL5A1-205ENST00000464187 PPP1R15AO75807 674 aaPredicted RBP20.71■□□□□ 0.91
COL5A1-205ENST00000464187 PLA2R1Q13018 1463 aa20.7■□□□□ 0.9
COL5A1-205ENST00000464187 TET3O43151 1660 aa20.7■□□□□ 0.9
COL5A1-205ENST00000464187 WASHC2CQ9Y4E1 1318 aa20.69■□□□□ 0.9
COL5A1-205ENST00000464187 LMTK2Q8IWU2 1503 aa20.69■□□□□ 0.9
COL5A1-205ENST00000464187 E9PCH4 1651 aa20.68■□□□□ 0.9
COL5A1-205ENST00000464187 L3MBTL2Q969R5 705 aa20.67■□□□□ 0.9
COL5A1-205ENST00000464187 CCDC144AA2RUR9 1427 aa20.67■□□□□ 0.9
COL5A1-205ENST00000464187 AGLP35573 1532 aa20.67■□□□□ 0.9
COL5A1-205ENST00000464187 EFCAB6Q5THR3 1501 aa20.65■□□□□ 0.9
COL5A1-205ENST00000464187 ABCC3O15438 1527 aa20.65■□□□□ 0.9
COL5A1-205ENST00000464187 YTHDC1Q96MU7 727 aaKnown RBP20.64■□□□□ 0.89
COL5A1-205ENST00000464187 CEP152O94986 1710 aa20.63■□□□□ 0.89
COL5A1-205ENST00000464187 PTPRTO14522 1441 aa20.63■□□□□ 0.89
COL5A1-205ENST00000464187 SIGLEC1Q9BZZ2 1709 aa20.61■□□□□ 0.89
COL5A1-205ENST00000464187 NPATQ14207 1427 aa20.61■□□□□ 0.89
COL5A1-205ENST00000464187 TRPM2O94759 1503 aa20.6■□□□□ 0.89
COL5A1-205ENST00000464187 PPP6R1Q9UPN7 881 aa20.59■□□□□ 0.89
COL5A1-205ENST00000464187 MLECQ14165 292 aa20.58■□□□□ 0.89
COL5A1-205ENST00000464187 SPHKAPQ2M3C7 1700 aa20.57■□□□□ 0.88
COL5A1-205ENST00000464187 ZC3H13Q5T200 1668 aaKnown RBP20.57■□□□□ 0.88
COL5A1-205ENST00000464187 ARID4BQ4LE39 1312 aaPredicted RBP20.56■□□□□ 0.88
COL5A1-205ENST00000464187 CAMSAP1Q5T5Y3 1602 aa20.56■□□□□ 0.88
COL5A1-205ENST00000464187 ARHGAP31Q2M1Z3 1444 aa20.55■□□□□ 0.88
COL5A1-205ENST00000464187 RGL3Q3MIN7 710 aa20.54■□□□□ 0.88
COL5A1-205ENST00000464187 DCAF11Q8TEB1 546 aa20.52■□□□□ 0.88
COL5A1-205ENST00000464187 CNTLNQ9NXG0 1405 aa20.51■□□□□ 0.87
COL5A1-205ENST00000464187 CLTCL1P53675 1640 aa20.51■□□□□ 0.87
COL5A1-205ENST00000464187 NBPF8Q3BBV2 869 aa20.5■□□□□ 0.87
COL5A1-205ENST00000464187 NOS1P29475 1434 aa20.5■□□□□ 0.87
COL5A1-205ENST00000464187 SPATA31E1Q6ZUB1 1445 aa20.5■□□□□ 0.87
COL5A1-205ENST00000464187 UGGT1Q9NYU2 1555 aa20.5■□□□□ 0.87
COL5A1-205ENST00000464187 ESF1Q9H501 851 aaKnown RBP20.48■□□□□ 0.87
COL5A1-205ENST00000464187 KDM2AQ9Y2K7 1162 aa20.48■□□□□ 0.87
COL5A1-205ENST00000464187 GTF3C3Q9Y5Q9 886 aa20.48■□□□□ 0.87
COL5A1-205ENST00000464187 ZNF326Q5BKZ1 582 aaKnown RBP20.47■□□□□ 0.87
COL5A1-205ENST00000464187 HIRIP3Q9BW71 556 aaPredicted RBP20.47■□□□□ 0.87
COL5A1-205ENST00000464187 CLTCQ00610 1675 aaKnown RBP20.45■□□□□ 0.86
COL5A1-205ENST00000464187 DDX10Q13206 875 aaKnown RBP20.45■□□□□ 0.86
COL5A1-205ENST00000464187 CFAP65Q6ZU64 1925 aaKnown RBP20.45■□□□□ 0.86
COL5A1-205ENST00000464187 UHRF1BP1Q6BDS2 1440 aa20.45■□□□□ 0.86
COL5A1-205ENST00000464187 FBXO31Q5XUX0 539 aaPredicted RBP20.43■□□□□ 0.86
COL5A1-205ENST00000464187 SYNMO15061 1565 aa20.42■□□□□ 0.86
COL5A1-205ENST00000464187 ZMYM3Q14202 1370 aa20.42■□□□□ 0.86
COL5A1-205ENST00000464187 NEURL4Q96JN8 1562 aa20.41■□□□□ 0.86
COL5A1-205ENST00000464187 SLC52A1Q9NWF4 448 aa20.41■□□□□ 0.86
COL5A1-205ENST00000464187 ERVK-7P63135 1459 aa20.41■□□□□ 0.86
COL5A1-205ENST00000464187 CHGAP10645 457 aaKnown RBP20.4■□□□□ 0.86
COL5A1-205ENST00000464187 PREX1Q8TCU6 1659 aa20.39■□□□□ 0.86
COL5A1-205ENST00000464187 IDI1Q13907 227 aa20.39■□□□□ 0.86
COL5A1-205ENST00000464187 PRAG1Q86YV5 1406 aa20.38■□□□□ 0.85
COL5A1-205ENST00000464187 PIK3C2BO00750 1634 aa20.38■□□□□ 0.85
COL5A1-205ENST00000464187 KIF1BO60333 1816 aa20.37■□□□□ 0.85
COL5A1-205ENST00000464187 ADGRB3O60242 1522 aa20.37■□□□□ 0.85
COL5A1-205ENST00000464187 STAC3Q96MF2 364 aa20.37■□□□□ 0.85
COL5A1-205ENST00000464187 SPATA31D1Q6ZQQ2 1576 aa20.35■□□□□ 0.85
COL5A1-205ENST00000464187 RALGAPBQ86X10 1494 aa20.35■□□□□ 0.85
COL5A1-205ENST00000464187 MROH2AA6NES4 1674 aa20.34■□□□□ 0.85
COL5A1-205ENST00000464187 EIF4G2P78344 907 aaKnown RBP eCLIP20.33■□□□□ 0.85
COL5A1-205ENST00000464187 HSPA5P11021 654 aaKnown RBP20.31■□□□□ 0.84
COL5A1-205ENST00000464187 POLR1AO95602 1720 aaPredicted RBP20.3■□□□□ 0.84
COL5A1-205ENST00000464187 ROCK2O75116 1388 aaKnown RBP20.3■□□□□ 0.84
COL5A1-205ENST00000464187 RPGRIP1LQ68CZ1 1315 aa20.3■□□□□ 0.84
COL5A1-205ENST00000464187 CARD11Q9BXL7 1154 aa20.3■□□□□ 0.84
COL5A1-205ENST00000464187 MYOM2P54296 1465 aa20.29■□□□□ 0.84
COL5A1-205ENST00000464187 CEBPAP49715 358 aaPredicted RBP20.28■□□□□ 0.84
COL5A1-205ENST00000464187 NBPF1Q3BBV0 1214 aa20.27■□□□□ 0.84
COL5A1-205ENST00000464187 TRPM1Q7Z4N2 1603 aa20.27■□□□□ 0.84
COL5A1-205ENST00000464187 MADDQ8WXG6 1647 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms