RNA–Protein interactions for RNA: ENST00000463925.1

COL5A1-204, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-204ENST00000463925 KIF3BO15066 747 aa27.61■■■□□ 2.01
COL5A1-204ENST00000463925 KDM5DQ9BY66 1539 aa27.61■■■□□ 2.01
COL5A1-204ENST00000463925 CEP170BQ9Y4F5 1589 aaPredicted RBP27.6■■■□□ 2.01
COL5A1-204ENST00000463925 PLA2R1Q13018 1463 aa27.57■■■□□ 2
COL5A1-204ENST00000463925 PZPP20742 1482 aa27.55■■■□□ 2
COL5A1-204ENST00000463925 RNF17Q9BXT8 1623 aaKnown RBP27.52■■■□□ 2
COL5A1-204ENST00000463925 APLP2Q06481 763 aa27.52■■■□□ 2
COL5A1-204ENST00000463925 A2ML1A8K2U0 1454 aa27.51■■■□□ 2
COL5A1-204ENST00000463925 EIF2AK4Q9P2K8 1649 aaKnown RBP27.51■■□□□ 1.99
COL5A1-204ENST00000463925 TCOF1Q13428 1488 aaKnown RBP27.51■■□□□ 1.99
COL5A1-204ENST00000463925 WASHC2CQ9Y4E1 1318 aa27.5■■□□□ 1.99
COL5A1-204ENST00000463925 LTBP4Q8N2S1 1624 aa27.49■■□□□ 1.99
COL5A1-204ENST00000463925 PKD2Q13563 968 aa27.48■■□□□ 1.99
COL5A1-204ENST00000463925 TNRQ92752 1358 aa27.48■■□□□ 1.99
COL5A1-204ENST00000463925 SHANK2Q9UPX8 1470 aa27.47■■□□□ 1.99
COL5A1-204ENST00000463925 DNMT1P26358 1616 aaKnown RBP27.46■■□□□ 1.99
COL5A1-204ENST00000463925 PTPN23Q9H3S7 1636 aa27.46■■□□□ 1.99
COL5A1-204ENST00000463925 ZC3H13Q5T200 1668 aaKnown RBP27.46■■□□□ 1.99
COL5A1-204ENST00000463925 CROCC2H7BZ55 1655 aa27.45■■□□□ 1.98
COL5A1-204ENST00000463925 NCKAP5LQ9HCH0 1330 aa27.44■■□□□ 1.98
COL5A1-204ENST00000463925 FBXO31Q5XUX0 539 aaPredicted RBP27.44■■□□□ 1.98
COL5A1-204ENST00000463925 DUOX2Q9NRD8 1548 aa27.44■■□□□ 1.98
COL5A1-204ENST00000463925 ABCC3O15438 1527 aa27.43■■□□□ 1.98
COL5A1-204ENST00000463925 ABCC5O15440 1437 aa27.42■■□□□ 1.98
COL5A1-204ENST00000463925 FGD6Q6ZV73 1430 aa27.42■■□□□ 1.98
COL5A1-204ENST00000463925 MROH1Q8NDA8 1641 aa27.42■■□□□ 1.98
COL5A1-204ENST00000463925 IQSEC2Q5JU85 1478 aa27.41■■□□□ 1.98
COL5A1-204ENST00000463925 NLRP1Q9C000 1473 aa27.39■■□□□ 1.98
COL5A1-204ENST00000463925 KIF15Q9NS87 1388 aa27.38■■□□□ 1.97
COL5A1-204ENST00000463925 DAPK1P53355 1430 aa27.38■■□□□ 1.97
COL5A1-204ENST00000463925 ERBINQ96RT1 1412 aa27.37■■□□□ 1.97
COL5A1-204ENST00000463925 SPATA31D1Q6ZQQ2 1576 aa27.35■■□□□ 1.97
COL5A1-204ENST00000463925 PRDM15P57071 1507 aaPredicted RBP27.34■■□□□ 1.97
COL5A1-204ENST00000463925 POLR1AO95602 1720 aaPredicted RBP27.33■■□□□ 1.97
COL5A1-204ENST00000463925 ZNF335Q9H4Z2 1342 aaPredicted RBP27.32■■□□□ 1.96
COL5A1-204ENST00000463925 ERVK-7P63135 1459 aa27.32■■□□□ 1.96
COL5A1-204ENST00000463925 NEURL4Q96JN8 1562 aa27.31■■□□□ 1.96
COL5A1-204ENST00000463925 UGGT1Q9NYU2 1555 aa27.31■■□□□ 1.96
COL5A1-204ENST00000463925 CEP152O94986 1710 aa27.31■■□□□ 1.96
COL5A1-204ENST00000463925 RRP7BPQ9NSQ0 103 aa27.28■■□□□ 1.96
COL5A1-204ENST00000463925 DEPDC5O75140 1603 aa27.27■■□□□ 1.96
COL5A1-204ENST00000463925 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.27■■□□□ 1.96
COL5A1-204ENST00000463925 THEMISQ8N1K5 641 aaPredicted RBP27.27■■□□□ 1.96
COL5A1-204ENST00000463925 ARHGAP31Q2M1Z3 1444 aa27.25■■□□□ 1.95
COL5A1-204ENST00000463925 ANKRD30AQ9BXX3 1397 aa27.25■■□□□ 1.95
COL5A1-204ENST00000463925 ANKLE2Q86XL3 938 aa27.23■■□□□ 1.95
COL5A1-204ENST00000463925 MED14O60244 1454 aa27.22■■□□□ 1.95
COL5A1-204ENST00000463925 ADGRL2O95490 1459 aa27.21■■□□□ 1.95
COL5A1-204ENST00000463925 CHIC2Q9UKJ5 165 aa27.18■■□□□ 1.94
COL5A1-204ENST00000463925 KANK1Q14678 1352 aa27.18■■□□□ 1.94
COL5A1-204ENST00000463925 NPHP4O75161 1426 aaPredicted RBP27.17■■□□□ 1.94
COL5A1-204ENST00000463925 VWDEQ8N2E2 1590 aa27.17■■□□□ 1.94
COL5A1-204ENST00000463925 CPS1P31327 1500 aa27.16■■□□□ 1.94
COL5A1-204ENST00000463925 LMTK2Q8IWU2 1503 aa27.16■■□□□ 1.94
COL5A1-204ENST00000463925 CFAP65Q6ZU64 1925 aaKnown RBP27.16■■□□□ 1.94
COL5A1-204ENST00000463925 UBR1Q8IWV7 1749 aa27.16■■□□□ 1.94
COL5A1-204ENST00000463925 IQGAP1P46940 1657 aa27.14■■□□□ 1.93
COL5A1-204ENST00000463925 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.13■■□□□ 1.93
COL5A1-204ENST00000463925 FAM50AQ14320 339 aaKnown RBP27.12■■□□□ 1.93
COL5A1-204ENST00000463925 ARHGAP23Q9P227 1491 aa27.08■■□□□ 1.93
COL5A1-204ENST00000463925 SLIT1O75093 1534 aa27.08■■□□□ 1.93
COL5A1-204ENST00000463925 UBAP1LF5GYI3 381 aa27.08■■□□□ 1.93
COL5A1-204ENST00000463925 SCAF11Q99590 1463 aaKnown RBP27.06■■□□□ 1.92
COL5A1-204ENST00000463925 EFCAB6Q5THR3 1501 aa27.06■■□□□ 1.92
COL5A1-204ENST00000463925 ANKRD50Q9ULJ7 1429 aa27.06■■□□□ 1.92
COL5A1-204ENST00000463925 PIK3C2BO00750 1634 aa27.05■■□□□ 1.92
COL5A1-204ENST00000463925 KDM5AP29375 1690 aaKnown RBP27.03■■□□□ 1.92
COL5A1-204ENST00000463925 NOS1P29475 1434 aa27.01■■□□□ 1.91
COL5A1-204ENST00000463925 SYNMO15061 1565 aa27.01■■□□□ 1.91
COL5A1-204ENST00000463925 RPRD2Q5VT52 1461 aaKnown RBP26.99■■□□□ 1.91
COL5A1-204ENST00000463925 ROCK1Q13464 1354 aa26.97■■□□□ 1.91
COL5A1-204ENST00000463925 TMEM2Q9UHN6 1383 aa26.97■■□□□ 1.91
COL5A1-204ENST00000463925 LTKP29376 864 aa26.97■■□□□ 1.91
COL5A1-204ENST00000463925 TXNDC2Q86VQ3 553 aa26.96■■□□□ 1.91
COL5A1-204ENST00000463925 STRCP1A6NGW2 1772 aa26.96■■□□□ 1.91
COL5A1-204ENST00000463925 UNC13BO14795 1591 aa26.96■■□□□ 1.91
COL5A1-204ENST00000463925 IDI1Q13907 227 aa26.95■■□□□ 1.9
COL5A1-204ENST00000463925 TET3O43151 1660 aa26.95■■□□□ 1.9
COL5A1-204ENST00000463925 TOM1O60784 492 aa26.94■■□□□ 1.9
COL5A1-204ENST00000463925 EID1Q9Y6B2 187 aa26.94■■□□□ 1.9
COL5A1-204ENST00000463925 STAG3Q9UJ98 1225 aa26.93■■□□□ 1.9
COL5A1-204ENST00000463925 ADGRB3O60242 1522 aa26.93■■□□□ 1.9
COL5A1-204ENST00000463925 DISP3Q9P2K9 1392 aa26.93■■□□□ 1.9
COL5A1-204ENST00000463925 LRRC7Q96NW7 1537 aa26.92■■□□□ 1.9
COL5A1-204ENST00000463925 SLC52A1Q9NWF4 448 aa26.9■■□□□ 1.9
COL5A1-204ENST00000463925 GCC2Q8IWJ2 1684 aa26.89■■□□□ 1.9
COL5A1-204ENST00000463925 ALKQ9UM73 1620 aa26.88■■□□□ 1.89
COL5A1-204ENST00000463925 PIP4K2BP78356 416 aa26.84■■□□□ 1.89
COL5A1-204ENST00000463925 SCAF1Q9H7N4 1312 aaKnown RBP26.84■■□□□ 1.89
COL5A1-204ENST00000463925 IQGAP3Q86VI3 1631 aa26.83■■□□□ 1.89
COL5A1-204ENST00000463925 E9PCH4 1651 aa26.8■■□□□ 1.88
COL5A1-204ENST00000463925 HSPA1LP34931 641 aa26.79■■□□□ 1.88
COL5A1-204ENST00000463925 PPARGC1BQ86YN6 1023 aaKnown RBP26.79■■□□□ 1.88
COL5A1-204ENST00000463925 ZFYVE9O95405 1425 aa26.78■■□□□ 1.88
COL5A1-204ENST00000463925 TMEM131LA2VDJ0 1609 aa26.77■■□□□ 1.88
COL5A1-204ENST00000463925 ITGAEP38570 1179 aa26.76■■□□□ 1.87
COL5A1-204ENST00000463925 XIRP1Q702N8 1843 aaKnown RBP26.75■■□□□ 1.87
COL5A1-204ENST00000463925 RRBP1Q9P2E9 1410 aaKnown RBP26.74■■□□□ 1.87
COL5A1-204ENST00000463925 MYO5BQ9ULV0 1848 aa26.74■■□□□ 1.87
COL5A1-204ENST00000463925 NUP155O75694 1391 aa26.74■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms