RNA–Protein interactions for RNA: ENST00000463539.5

CCDC78-206, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,831 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-206ENST00000463539 ANKRD30BQ9BXX2 1392 aa27.57■■■□□ 2
CCDC78-206ENST00000463539 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.56■■■□□ 2
CCDC78-206ENST00000463539 A2MP01023 1474 aa27.54■■■□□ 2
CCDC78-206ENST00000463539 FRMPD1Q5SYB0 1578 aa27.53■■■□□ 2
CCDC78-206ENST00000463539 EIF2AK4Q9P2K8 1649 aaKnown RBP27.53■■■□□ 2
CCDC78-206ENST00000463539 TONSLQ96HA7 1378 aa27.52■■■□□ 2
CCDC78-206ENST00000463539 IQGAP3Q86VI3 1631 aa27.52■■■□□ 2
CCDC78-206ENST00000463539 ABCA6Q8N139 1617 aa27.51■■□□□ 1.99
CCDC78-206ENST00000463539 ZMYM4Q5VZL5 1548 aa27.49■■□□□ 1.99
CCDC78-206ENST00000463539 DEPDC5O75140 1603 aa27.48■■□□□ 1.99
CCDC78-206ENST00000463539 KIF3BO15066 747 aa27.48■■□□□ 1.99
CCDC78-206ENST00000463539 DIP2CQ9Y2E4 1556 aa27.46■■□□□ 1.99
CCDC78-206ENST00000463539 RPRD2Q5VT52 1461 aaKnown RBP27.45■■□□□ 1.98
CCDC78-206ENST00000463539 KANK1Q14678 1352 aa27.44■■□□□ 1.98
CCDC78-206ENST00000463539 YEATS2Q9ULM3 1422 aa27.44■■□□□ 1.98
CCDC78-206ENST00000463539 PRDM15P57071 1507 aaPredicted RBP27.43■■□□□ 1.98
CCDC78-206ENST00000463539 MROH1Q8NDA8 1641 aa27.39■■□□□ 1.98
CCDC78-206ENST00000463539 VWDEQ8N2E2 1590 aa27.38■■□□□ 1.97
CCDC78-206ENST00000463539 COL17A1Q9UMD9 1497 aaPredicted RBP27.38■■□□□ 1.97
CCDC78-206ENST00000463539 RNF17Q9BXT8 1623 aaKnown RBP27.37■■□□□ 1.97
CCDC78-206ENST00000463539 PPP1R15AO75807 674 aaPredicted RBP27.37■■□□□ 1.97
CCDC78-206ENST00000463539 TRHP20396 242 aaPredicted RBP27.37■■□□□ 1.97
CCDC78-206ENST00000463539 BCORL1Q5H9F3 1711 aa27.35■■□□□ 1.97
CCDC78-206ENST00000463539 ATP10AO60312 1499 aa27.31■■□□□ 1.96
CCDC78-206ENST00000463539 TET3O43151 1660 aa27.31■■□□□ 1.96
CCDC78-206ENST00000463539 GGT6Q6P531 493 aa27.3■■□□□ 1.96
CCDC78-206ENST00000463539 PLA2R1Q13018 1463 aa27.29■■□□□ 1.96
CCDC78-206ENST00000463539 L3MBTL2Q969R5 705 aa27.29■■□□□ 1.96
CCDC78-206ENST00000463539 CCDC144AA2RUR9 1427 aa27.29■■□□□ 1.96
CCDC78-206ENST00000463539 LMTK2Q8IWU2 1503 aa27.28■■□□□ 1.96
CCDC78-206ENST00000463539 REREQ9P2R6 1566 aa27.27■■□□□ 1.96
CCDC78-206ENST00000463539 E9PCH4 1651 aa27.26■■□□□ 1.95
CCDC78-206ENST00000463539 ARHGEF40Q8TER5 1519 aa27.25■■□□□ 1.95
CCDC78-206ENST00000463539 ZNF316A6NFI3 1004 aaPredicted RBP27.25■■□□□ 1.95
CCDC78-206ENST00000463539 EFCAB6Q5THR3 1501 aa27.24■■□□□ 1.95
CCDC78-206ENST00000463539 ABCC3O15438 1527 aa27.21■■□□□ 1.95
CCDC78-206ENST00000463539 WASHC2CQ9Y4E1 1318 aa27.21■■□□□ 1.95
CCDC78-206ENST00000463539 PTPRTO14522 1441 aa27.2■■□□□ 1.94
CCDC78-206ENST00000463539 AGLP35573 1532 aa27.2■■□□□ 1.94
CCDC78-206ENST00000463539 TRPM2O94759 1503 aa27.19■■□□□ 1.94
CCDC78-206ENST00000463539 CEP152O94986 1710 aa27.18■■□□□ 1.94
CCDC78-206ENST00000463539 SPHKAPQ2M3C7 1700 aa27.15■■□□□ 1.94
CCDC78-206ENST00000463539 ZC3H13Q5T200 1668 aaKnown RBP27.13■■□□□ 1.93
CCDC78-206ENST00000463539 NPATQ14207 1427 aa27.12■■□□□ 1.93
CCDC78-206ENST00000463539 CAMSAP1Q5T5Y3 1602 aa27.1■■□□□ 1.93
CCDC78-206ENST00000463539 SIGLEC1Q9BZZ2 1709 aa27.07■■□□□ 1.92
CCDC78-206ENST00000463539 PPP6R1Q9UPN7 881 aa27.06■■□□□ 1.92
CCDC78-206ENST00000463539 CLTCL1P53675 1640 aa27.06■■□□□ 1.92
CCDC78-206ENST00000463539 ARHGAP31Q2M1Z3 1444 aa27.06■■□□□ 1.92
CCDC78-206ENST00000463539 NBPF8Q3BBV2 869 aa27.06■■□□□ 1.92
CCDC78-206ENST00000463539 RGL3Q3MIN7 710 aa27.04■■□□□ 1.92
CCDC78-206ENST00000463539 DCAF11Q8TEB1 546 aa27.04■■□□□ 1.92
CCDC78-206ENST00000463539 SPATA31E1Q6ZUB1 1445 aa27.04■■□□□ 1.92
CCDC78-206ENST00000463539 CNTLNQ9NXG0 1405 aa27.04■■□□□ 1.92
CCDC78-206ENST00000463539 UHRF1BP1Q6BDS2 1440 aa27.03■■□□□ 1.92
CCDC78-206ENST00000463539 ZNF326Q5BKZ1 582 aaKnown RBP27.02■■□□□ 1.92
CCDC78-206ENST00000463539 UGGT1Q9NYU2 1555 aa27■■□□□ 1.91
CCDC78-206ENST00000463539 MLECQ14165 292 aa27■■□□□ 1.91
CCDC78-206ENST00000463539 KDM2AQ9Y2K7 1162 aa27■■□□□ 1.91
CCDC78-206ENST00000463539 NOS1P29475 1434 aa26.99■■□□□ 1.91
CCDC78-206ENST00000463539 ARID4BQ4LE39 1312 aaPredicted RBP26.98■■□□□ 1.91
CCDC78-206ENST00000463539 NEURL4Q96JN8 1562 aa26.95■■□□□ 1.91
CCDC78-206ENST00000463539 PRAG1Q86YV5 1406 aa26.93■■□□□ 1.9
CCDC78-206ENST00000463539 DIEXFQ68CQ4 756 aaKnown RBP26.92■■□□□ 1.9
CCDC78-206ENST00000463539 RALGAPBQ86X10 1494 aa26.92■■□□□ 1.9
CCDC78-206ENST00000463539 ESF1Q9H501 851 aaKnown RBP26.91■■□□□ 1.9
CCDC78-206ENST00000463539 CLTCQ00610 1675 aaKnown RBP26.91■■□□□ 1.9
CCDC78-206ENST00000463539 SYNMO15061 1565 aa26.9■■□□□ 1.9
CCDC78-206ENST00000463539 EIF4G2P78344 907 aaKnown RBP eCLIP26.89■■□□□ 1.9
CCDC78-206ENST00000463539 HIRIP3Q9BW71 556 aaPredicted RBP26.88■■□□□ 1.89
CCDC78-206ENST00000463539 ADGRB3O60242 1522 aa26.87■■□□□ 1.89
CCDC78-206ENST00000463539 STAC3Q96MF2 364 aa26.87■■□□□ 1.89
CCDC78-206ENST00000463539 PREX1Q8TCU6 1659 aa26.87■■□□□ 1.89
CCDC78-206ENST00000463539 KIF1BO60333 1816 aa26.86■■□□□ 1.89
CCDC78-206ENST00000463539 ERVK-7P63135 1459 aa26.86■■□□□ 1.89
CCDC78-206ENST00000463539 PIK3C2BO00750 1634 aa26.86■■□□□ 1.89
CCDC78-206ENST00000463539 HSPA5P11021 654 aaKnown RBP26.86■■□□□ 1.89
CCDC78-206ENST00000463539 SLC52A1Q9NWF4 448 aa26.85■■□□□ 1.89
CCDC78-206ENST00000463539 CFAP65Q6ZU64 1925 aaKnown RBP26.84■■□□□ 1.89
CCDC78-206ENST00000463539 CHGAP10645 457 aaKnown RBP26.84■■□□□ 1.89
CCDC78-206ENST00000463539 FBXO31Q5XUX0 539 aaPredicted RBP26.83■■□□□ 1.89
CCDC78-206ENST00000463539 MROH2AA6NES4 1674 aa26.82■■□□□ 1.88
CCDC78-206ENST00000463539 ROCK2O75116 1388 aaKnown RBP26.81■■□□□ 1.88
CCDC78-206ENST00000463539 ZMYM3Q14202 1370 aa26.8■■□□□ 1.88
CCDC78-206ENST00000463539 CARD11Q9BXL7 1154 aa26.8■■□□□ 1.88
CCDC78-206ENST00000463539 TRPM1Q7Z4N2 1603 aa26.79■■□□□ 1.88
CCDC78-206ENST00000463539 IDI1Q13907 227 aa26.79■■□□□ 1.88
CCDC78-206ENST00000463539 MYOM2P54296 1465 aa26.79■■□□□ 1.88
CCDC78-206ENST00000463539 SPATA31D1Q6ZQQ2 1576 aa26.78■■□□□ 1.88
CCDC78-206ENST00000463539 MADDQ8WXG6 1647 aa26.78■■□□□ 1.88
CCDC78-206ENST00000463539 USP47Q96K76 1375 aa26.78■■□□□ 1.88
CCDC78-206ENST00000463539 RPGRIP1LQ68CZ1 1315 aa26.75■■□□□ 1.87
CCDC78-206ENST00000463539 GPRASP1Q5JY77 1395 aa26.74■■□□□ 1.87
CCDC78-206ENST00000463539 IFT172Q9UG01 1749 aa26.72■■□□□ 1.87
CCDC78-206ENST00000463539 NBPF1Q3BBV0 1214 aa26.72■■□□□ 1.87
CCDC78-206ENST00000463539 NRXN1Q9ULB1 1477 aa26.69■■□□□ 1.86
CCDC78-206ENST00000463539 ADGRF5Q8IZF2 1346 aa26.69■■□□□ 1.86
CCDC78-206ENST00000463539 LAMC1P11047 1609 aa26.68■■□□□ 1.86
CCDC78-206ENST00000463539 TMEM131LA2VDJ0 1609 aa26.67■■□□□ 1.86
CCDC78-206ENST00000463539 PPLO60437 1756 aa26.66■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms