RNA–Protein interactions for RNA: ENST00000463440.1

COL1A1-202, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 614 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-202ENST00000463440 FAM50AQ14320 339 aaKnown RBP25.06■■□□□ 1.6
COL1A1-202ENST00000463440 KDM5DQ9BY66 1539 aa25.05■■□□□ 1.6
COL1A1-202ENST00000463440 WASHC2CQ9Y4E1 1318 aa25.05■■□□□ 1.6
COL1A1-202ENST00000463440 KIF15Q9NS87 1388 aa25.05■■□□□ 1.6
COL1A1-202ENST00000463440 EIF2AK4Q9P2K8 1649 aaKnown RBP25.04■■□□□ 1.6
COL1A1-202ENST00000463440 RRP7BPQ9NSQ0 103 aa25.03■■□□□ 1.6
COL1A1-202ENST00000463440 PTPRKQ15262 1439 aa25.02■■□□□ 1.6
COL1A1-202ENST00000463440 RNF17Q9BXT8 1623 aaKnown RBP25.01■■□□□ 1.59
COL1A1-202ENST00000463440 CHIC2Q9UKJ5 165 aa25.01■■□□□ 1.59
COL1A1-202ENST00000463440 ANKRD30AQ9BXX3 1397 aa25.01■■□□□ 1.59
COL1A1-202ENST00000463440 PPARGC1BQ86YN6 1023 aaKnown RBP24.99■■□□□ 1.59
COL1A1-202ENST00000463440 ERBINQ96RT1 1412 aa24.99■■□□□ 1.59
COL1A1-202ENST00000463440 PZPP20742 1482 aa24.95■■□□□ 1.58
COL1A1-202ENST00000463440 NCOA1Q15788 1441 aa24.95■■□□□ 1.58
COL1A1-202ENST00000463440 ZC3H13Q5T200 1668 aaKnown RBP24.94■■□□□ 1.58
COL1A1-202ENST00000463440 ADGRL2O95490 1459 aa24.93■■□□□ 1.58
COL1A1-202ENST00000463440 MYO3AQ8NEV4 1616 aa24.93■■□□□ 1.58
COL1A1-202ENST00000463440 ABCC3O15438 1527 aa24.92■■□□□ 1.58
COL1A1-202ENST00000463440 MROH1Q8NDA8 1641 aa24.92■■□□□ 1.58
COL1A1-202ENST00000463440 FBXO31Q5XUX0 539 aaPredicted RBP24.91■■□□□ 1.58
COL1A1-202ENST00000463440 DMRT2Q9Y5R5 561 aa24.91■■□□□ 1.58
COL1A1-202ENST00000463440 TNRQ92752 1358 aa24.9■■□□□ 1.58
COL1A1-202ENST00000463440 ZNF142P52746 1687 aaPredicted RBP24.88■■□□□ 1.57
COL1A1-202ENST00000463440 STRCQ7RTU9 1775 aa24.88■■□□□ 1.57
COL1A1-202ENST00000463440 CEP170BQ9Y4F5 1589 aaPredicted RBP24.88■■□□□ 1.57
COL1A1-202ENST00000463440 PRDM15P57071 1507 aaPredicted RBP24.87■■□□□ 1.57
COL1A1-202ENST00000463440 KANK1Q14678 1352 aa24.86■■□□□ 1.57
COL1A1-202ENST00000463440 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.86■■□□□ 1.57
COL1A1-202ENST00000463440 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.86■■□□□ 1.57
COL1A1-202ENST00000463440 A2ML1A8K2U0 1454 aa24.85■■□□□ 1.57
COL1A1-202ENST00000463440 CEP152O94986 1710 aa24.85■■□□□ 1.57
COL1A1-202ENST00000463440 DEPDC5O75140 1603 aa24.85■■□□□ 1.57
COL1A1-202ENST00000463440 CAMSAP1Q5T5Y3 1602 aa24.85■■□□□ 1.57
COL1A1-202ENST00000463440 ANKRD50Q9ULJ7 1429 aa24.81■■□□□ 1.56
COL1A1-202ENST00000463440 ROCK1Q13464 1354 aa24.8■■□□□ 1.56
COL1A1-202ENST00000463440 PTPRTO14522 1441 aa24.8■■□□□ 1.56
COL1A1-202ENST00000463440 PLA2R1Q13018 1463 aa24.79■■□□□ 1.56
COL1A1-202ENST00000463440 NLRP1Q9C000 1473 aa24.79■■□□□ 1.56
COL1A1-202ENST00000463440 ITGAEP38570 1179 aa24.79■■□□□ 1.56
COL1A1-202ENST00000463440 SPATA31D1Q6ZQQ2 1576 aa24.79■■□□□ 1.56
COL1A1-202ENST00000463440 ARHGAP31Q2M1Z3 1444 aa24.78■■□□□ 1.56
COL1A1-202ENST00000463440 ERVK-7P63135 1459 aa24.78■■□□□ 1.56
COL1A1-202ENST00000463440 PKD2Q13563 968 aa24.76■■□□□ 1.55
COL1A1-202ENST00000463440 RRBP1Q9P2E9 1410 aaKnown RBP24.76■■□□□ 1.55
COL1A1-202ENST00000463440 NCKAP5LQ9HCH0 1330 aa24.75■■□□□ 1.55
COL1A1-202ENST00000463440 LMTK2Q8IWU2 1503 aa24.75■■□□□ 1.55
COL1A1-202ENST00000463440 VWDEQ8N2E2 1590 aa24.75■■□□□ 1.55
COL1A1-202ENST00000463440 CFAP65Q6ZU64 1925 aaKnown RBP24.73■■□□□ 1.55
COL1A1-202ENST00000463440 THEMISQ8N1K5 641 aaPredicted RBP24.73■■□□□ 1.55
COL1A1-202ENST00000463440 ILDR1Q86SU0 546 aaPredicted RBP24.72■■□□□ 1.55
COL1A1-202ENST00000463440 UGGT1Q9NYU2 1555 aa24.71■■□□□ 1.55
COL1A1-202ENST00000463440 CERKQ8TCT0 537 aa24.67■■□□□ 1.54
COL1A1-202ENST00000463440 EFCAB6Q5THR3 1501 aa24.66■■□□□ 1.54
COL1A1-202ENST00000463440 UNC13BO14795 1591 aa24.65■■□□□ 1.54
COL1A1-202ENST00000463440 ANKLE2Q86XL3 938 aa24.65■■□□□ 1.54
COL1A1-202ENST00000463440 FBXO41Q8TF61 875 aa24.65■■□□□ 1.54
COL1A1-202ENST00000463440 POLR1AO95602 1720 aaPredicted RBP24.62■■□□□ 1.53
COL1A1-202ENST00000463440 TET3O43151 1660 aa24.6■■□□□ 1.53
COL1A1-202ENST00000463440 RPRD2Q5VT52 1461 aaKnown RBP24.6■■□□□ 1.53
COL1A1-202ENST00000463440 UBR1Q8IWV7 1749 aa24.58■■□□□ 1.53
COL1A1-202ENST00000463440 NOS1P29475 1434 aa24.58■■□□□ 1.53
COL1A1-202ENST00000463440 STAG3Q9UJ98 1225 aa24.57■■□□□ 1.52
COL1A1-202ENST00000463440 NEURL4Q96JN8 1562 aa24.57■■□□□ 1.52
COL1A1-202ENST00000463440 GCC2Q8IWJ2 1684 aa24.56■■□□□ 1.52
COL1A1-202ENST00000463440 NUP155O75694 1391 aa24.56■■□□□ 1.52
COL1A1-202ENST00000463440 SYNMO15061 1565 aa24.55■■□□□ 1.52
COL1A1-202ENST00000463440 IQGAP3Q86VI3 1631 aa24.55■■□□□ 1.52
COL1A1-202ENST00000463440 LTBP4Q8N2S1 1624 aa24.55■■□□□ 1.52
COL1A1-202ENST00000463440 IDI1Q13907 227 aa24.55■■□□□ 1.52
COL1A1-202ENST00000463440 PIK3C2BO00750 1634 aa24.54■■□□□ 1.52
COL1A1-202ENST00000463440 SLC52A1Q9NWF4 448 aa24.54■■□□□ 1.52
COL1A1-202ENST00000463440 ZNF335Q9H4Z2 1342 aaPredicted RBP24.54■■□□□ 1.52
COL1A1-202ENST00000463440 NPHP4O75161 1426 aaPredicted RBP24.53■■□□□ 1.52
COL1A1-202ENST00000463440 MED14O60244 1454 aa24.53■■□□□ 1.52
COL1A1-202ENST00000463440 NAIPQ13075 1403 aa24.52■■□□□ 1.52
COL1A1-202ENST00000463440 SLIT1O75093 1534 aa24.51■■□□□ 1.51
COL1A1-202ENST00000463440 KDM5AP29375 1690 aaKnown RBP24.5■■□□□ 1.51
COL1A1-202ENST00000463440 ARHGAP23Q9P227 1491 aa24.5■■□□□ 1.51
COL1A1-202ENST00000463440 EID1Q9Y6B2 187 aa24.49■■□□□ 1.51
COL1A1-202ENST00000463440 SCAF11Q99590 1463 aaKnown RBP24.49■■□□□ 1.51
COL1A1-202ENST00000463440 HFM1A2PYH4 1435 aa24.48■■□□□ 1.51
COL1A1-202ENST00000463440 E9PCH4 1651 aa24.48■■□□□ 1.51
COL1A1-202ENST00000463440 TXNDC2Q86VQ3 553 aa24.48■■□□□ 1.51
COL1A1-202ENST00000463440 IQGAP1P46940 1657 aa24.47■■□□□ 1.51
COL1A1-202ENST00000463440 TMEM2Q9UHN6 1383 aa24.47■■□□□ 1.51
COL1A1-202ENST00000463440 IQSEC2Q5JU85 1478 aa24.46■■□□□ 1.51
COL1A1-202ENST00000463440 ADGRB3O60242 1522 aa24.45■■□□□ 1.51
COL1A1-202ENST00000463440 LTKP29376 864 aa24.45■■□□□ 1.5
COL1A1-202ENST00000463440 TRIM52Q96A61 297 aa24.39■■□□□ 1.49
COL1A1-202ENST00000463440 CPS1P31327 1500 aa24.39■■□□□ 1.49
COL1A1-202ENST00000463440 CHGAP10645 457 aaKnown RBP24.37■■□□□ 1.49
COL1A1-202ENST00000463440 TMEM131LA2VDJ0 1609 aa24.35■■□□□ 1.49
COL1A1-202ENST00000463440 HDGFP51858 240 aaKnown RBP24.35■■□□□ 1.49
COL1A1-202ENST00000463440 MYO5BQ9ULV0 1848 aa24.33■■□□□ 1.48
COL1A1-202ENST00000463440 SPHKAPQ2M3C7 1700 aa24.32■■□□□ 1.48
COL1A1-202ENST00000463440 RIMS2Q9UQ26 1411 aa24.31■■□□□ 1.48
COL1A1-202ENST00000463440 ZFYVE9O95405 1425 aa24.3■■□□□ 1.48
COL1A1-202ENST00000463440 PPP1R15AO75807 674 aaPredicted RBP24.3■■□□□ 1.48
COL1A1-202ENST00000463440 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.29■■□□□ 1.48
COL1A1-202ENST00000463440 BCANQ96GW7 911 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms