RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 FAM50AQ14320 339 aaKnown RBP20.08■□□□□ 0.81
R3HDM1-213ENST00000463230 PREX1Q8TCU6 1659 aa20.08■□□□□ 0.81
R3HDM1-213ENST00000463230 KDM5DQ9BY66 1539 aa20.08■□□□□ 0.8
R3HDM1-213ENST00000463230 NPATQ14207 1427 aa20.08■□□□□ 0.8
R3HDM1-213ENST00000463230 GGT6Q6P531 493 aa20.07■□□□□ 0.8
R3HDM1-213ENST00000463230 LMTK3Q96Q04 1460 aa20.06■□□□□ 0.8
R3HDM1-213ENST00000463230 ZC3H13Q5T200 1668 aaKnown RBP20.06■□□□□ 0.8
R3HDM1-213ENST00000463230 NCOA1Q15788 1441 aa20.06■□□□□ 0.8
R3HDM1-213ENST00000463230 ZMYM3Q14202 1370 aa20.05■□□□□ 0.8
R3HDM1-213ENST00000463230 RRBP1Q9P2E9 1410 aaKnown RBP20.04■□□□□ 0.8
R3HDM1-213ENST00000463230 ROCK1Q13464 1354 aa20.02■□□□□ 0.79
R3HDM1-213ENST00000463230 CEBPAP49715 358 aaPredicted RBP20.02■□□□□ 0.79
R3HDM1-213ENST00000463230 DEPDC5O75140 1603 aa20.01■□□□□ 0.79
R3HDM1-213ENST00000463230 MROH1Q8NDA8 1641 aa20.01■□□□□ 0.79
R3HDM1-213ENST00000463230 RRP7BPQ9NSQ0 103 aa20.01■□□□□ 0.79
R3HDM1-213ENST00000463230 PRDM15P57071 1507 aaPredicted RBP20.01■□□□□ 0.79
R3HDM1-213ENST00000463230 UHRF1BP1Q6BDS2 1440 aa20■□□□□ 0.79
R3HDM1-213ENST00000463230 PTPRKQ15262 1439 aa20■□□□□ 0.79
R3HDM1-213ENST00000463230 WASHC2CQ9Y4E1 1318 aa19.98■□□□□ 0.79
R3HDM1-213ENST00000463230 ABCC3O15438 1527 aa19.98■□□□□ 0.79
R3HDM1-213ENST00000463230 PZPP20742 1482 aa19.98■□□□□ 0.79
R3HDM1-213ENST00000463230 PPARGC1BQ86YN6 1023 aaKnown RBP19.98■□□□□ 0.79
R3HDM1-213ENST00000463230 CHIC2Q9UKJ5 165 aa19.98■□□□□ 0.79
R3HDM1-213ENST00000463230 ANKRD50Q9ULJ7 1429 aa19.94■□□□□ 0.78
R3HDM1-213ENST00000463230 KANK1Q14678 1352 aa19.94■□□□□ 0.78
R3HDM1-213ENST00000463230 ZNF142P52746 1687 aaPredicted RBP19.93■□□□□ 0.78
R3HDM1-213ENST00000463230 VWDEQ8N2E2 1590 aa19.93■□□□□ 0.78
R3HDM1-213ENST00000463230 CAMSAP1Q5T5Y3 1602 aa19.92■□□□□ 0.78
R3HDM1-213ENST00000463230 MYO3AQ8NEV4 1616 aa19.92■□□□□ 0.78
R3HDM1-213ENST00000463230 LMTK2Q8IWU2 1503 aa19.92■□□□□ 0.78
R3HDM1-213ENST00000463230 CEP152O94986 1710 aa19.92■□□□□ 0.78
R3HDM1-213ENST00000463230 ARHGAP31Q2M1Z3 1444 aa19.91■□□□□ 0.78
R3HDM1-213ENST00000463230 TNRQ92752 1358 aa19.88■□□□□ 0.77
R3HDM1-213ENST00000463230 UNC13BO14795 1591 aa19.88■□□□□ 0.77
R3HDM1-213ENST00000463230 SPATA31D1Q6ZQQ2 1576 aa19.88■□□□□ 0.77
R3HDM1-213ENST00000463230 CEP170BQ9Y4F5 1589 aaPredicted RBP19.87■□□□□ 0.77
R3HDM1-213ENST00000463230 A2ML1A8K2U0 1454 aa19.86■□□□□ 0.77
R3HDM1-213ENST00000463230 NLRP1Q9C000 1473 aa19.86■□□□□ 0.77
R3HDM1-213ENST00000463230 ERVK-7P63135 1459 aa19.85■□□□□ 0.77
R3HDM1-213ENST00000463230 HSPA2P54652 639 aa19.84■□□□□ 0.77
R3HDM1-213ENST00000463230 PLA2R1Q13018 1463 aa19.82■□□□□ 0.76
R3HDM1-213ENST00000463230 EFCAB6Q5THR3 1501 aa19.82■□□□□ 0.76
R3HDM1-213ENST00000463230 GCC2Q8IWJ2 1684 aa19.82■□□□□ 0.76
R3HDM1-213ENST00000463230 ITGAEP38570 1179 aa19.82■□□□□ 0.76
R3HDM1-213ENST00000463230 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.82■□□□□ 0.767e-8■■■■□ 25
R3HDM1-213ENST00000463230 FBXO31Q5XUX0 539 aaPredicted RBP19.81■□□□□ 0.76
R3HDM1-213ENST00000463230 TET3O43151 1660 aa19.81■□□□□ 0.76
R3HDM1-213ENST00000463230 RPRD2Q5VT52 1461 aaKnown RBP19.8■□□□□ 0.76
R3HDM1-213ENST00000463230 STRCQ7RTU9 1775 aa19.8■□□□□ 0.76
R3HDM1-213ENST00000463230 DMRT2Q9Y5R5 561 aa19.79■□□□□ 0.76
R3HDM1-213ENST00000463230 IQGAP3Q86VI3 1631 aa19.79■□□□□ 0.76
R3HDM1-213ENST00000463230 HFM1A2PYH4 1435 aa19.77■□□□□ 0.76
R3HDM1-213ENST00000463230 PTPRTO14522 1441 aa19.77■□□□□ 0.75
R3HDM1-213ENST00000463230 NAIPQ13075 1403 aa19.76■□□□□ 0.75
R3HDM1-213ENST00000463230 PKD2Q13563 968 aa19.74■□□□□ 0.75
R3HDM1-213ENST00000463230 UGGT1Q9NYU2 1555 aa19.73■□□□□ 0.75
R3HDM1-213ENST00000463230 NOS1P29475 1434 aa19.73■□□□□ 0.75
R3HDM1-213ENST00000463230 KDM5AP29375 1690 aaKnown RBP19.73■□□□□ 0.75
R3HDM1-213ENST00000463230 CFAP65Q6ZU64 1925 aaKnown RBP19.73■□□□□ 0.75
R3HDM1-213ENST00000463230 SENP3Q9H4L4 574 aaPredicted RBP19.72■□□□□ 0.75
R3HDM1-213ENST00000463230 THEMISQ8N1K5 641 aaPredicted RBP19.71■□□□□ 0.75
R3HDM1-213ENST00000463230 NUP155O75694 1391 aa19.7■□□□□ 0.74
R3HDM1-213ENST00000463230 POLR1AO95602 1720 aaPredicted RBP19.69■□□□□ 0.74
R3HDM1-213ENST00000463230 UBR1Q8IWV7 1749 aa19.69■□□□□ 0.74
R3HDM1-213ENST00000463230 SYNMO15061 1565 aa19.69■□□□□ 0.74
R3HDM1-213ENST00000463230 ACIN1Q9UKV3 1341 aaKnown RBP19.69■□□□□ 0.74
R3HDM1-213ENST00000463230 E9PCH4 1651 aa19.68■□□□□ 0.74
R3HDM1-213ENST00000463230 SLC52A1Q9NWF4 448 aa19.66■□□□□ 0.74
R3HDM1-213ENST00000463230 PIK3C2BO00750 1634 aa19.65■□□□□ 0.74
R3HDM1-213ENST00000463230 SLIT1O75093 1534 aa19.64■□□□□ 0.73
R3HDM1-213ENST00000463230 ARHGAP23Q9P227 1491 aa19.63■□□□□ 0.73
R3HDM1-213ENST00000463230 ANKLE2Q86XL3 938 aa19.63■□□□□ 0.73
R3HDM1-213ENST00000463230 MED14O60244 1454 aa19.63■□□□□ 0.73
R3HDM1-213ENST00000463230 NCKAP5LQ9HCH0 1330 aa19.62■□□□□ 0.73
R3HDM1-213ENST00000463230 ADGRB3O60242 1522 aa19.62■□□□□ 0.73
R3HDM1-213ENST00000463230 NEURL4Q96JN8 1562 aa19.62■□□□□ 0.73
R3HDM1-213ENST00000463230 IDI1Q13907 227 aa19.59■□□□□ 0.73
R3HDM1-213ENST00000463230 SPHKAPQ2M3C7 1700 aa19.58■□□□□ 0.73
R3HDM1-213ENST00000463230 SCAF11Q99590 1463 aaKnown RBP19.57■□□□□ 0.72
R3HDM1-213ENST00000463230 NPHP4O75161 1426 aaPredicted RBP19.57■□□□□ 0.72
R3HDM1-213ENST00000463230 TMEM2Q9UHN6 1383 aa19.56■□□□□ 0.72
R3HDM1-213ENST00000463230 STAG3Q9UJ98 1225 aa19.56■□□□□ 0.72
R3HDM1-213ENST00000463230 IQGAP1P46940 1657 aa19.56■□□□□ 0.72
R3HDM1-213ENST00000463230 SETD5Q9C0A6 1442 aa19.55■□□□□ 0.72
R3HDM1-213ENST00000463230 TMEM131LA2VDJ0 1609 aa19.54■□□□□ 0.72
R3HDM1-213ENST00000463230 TRIM52Q96A61 297 aa19.53■□□□□ 0.72
R3HDM1-213ENST00000463230 EID1Q9Y6B2 187 aa19.53■□□□□ 0.72
R3HDM1-213ENST00000463230 TRPM2O94759 1503 aa19.53■□□□□ 0.72
R3HDM1-213ENST00000463230 LTBP4Q8N2S1 1624 aa19.52■□□□□ 0.72
R3HDM1-213ENST00000463230 IQSEC2Q5JU85 1478 aa19.52■□□□□ 0.71
R3HDM1-213ENST00000463230 TXNDC2Q86VQ3 553 aa19.49■□□□□ 0.71
R3HDM1-213ENST00000463230 CERKQ8TCT0 537 aa19.49■□□□□ 0.71
R3HDM1-213ENST00000463230 HDGFP51858 240 aaKnown RBP19.49■□□□□ 0.71
R3HDM1-213ENST00000463230 SLC4A1APQ9BWU0 796 aaKnown RBP19.49■□□□□ 0.71
R3HDM1-213ENST00000463230 MYO5BQ9ULV0 1848 aa19.49■□□□□ 0.71
R3HDM1-213ENST00000463230 ZFYVE9O95405 1425 aa19.47■□□□□ 0.71
R3HDM1-213ENST00000463230 HRCP23327 699 aa19.47■□□□□ 0.71
R3HDM1-213ENST00000463230 LTKP29376 864 aa19.47■□□□□ 0.71
R3HDM1-213ENST00000463230 CPS1P31327 1500 aa19.47■□□□□ 0.71
R3HDM1-213ENST00000463230 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms