RNA–Protein interactions for RNA: ENST00000463216.5

TTC3-212, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 842 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-212ENST00000463216 KDM5DQ9BY66 1539 aa37.89■■■■□ 3.66
TTC3-212ENST00000463216 FBXO31Q5XUX0 539 aaPredicted RBP37.89■■■■□ 3.66
TTC3-212ENST00000463216 APLP2Q06481 763 aa37.88■■■■□ 3.65
TTC3-212ENST00000463216 MYOM3Q5VTT5 1437 aa37.87■■■■□ 3.65
TTC3-212ENST00000463216 PKD2Q13563 968 aa37.85■■■■□ 3.65
TTC3-212ENST00000463216 PLA2R1Q13018 1463 aa37.84■■■■□ 3.65
TTC3-212ENST00000463216 LTBP4Q8N2S1 1624 aa37.83■■■■□ 3.65
TTC3-212ENST00000463216 A2ML1A8K2U0 1454 aa37.83■■■■□ 3.65
TTC3-212ENST00000463216 TNRQ92752 1358 aa37.82■■■■□ 3.65
TTC3-212ENST00000463216 MIA2Q96PC5 1412 aa37.81■■■■□ 3.64
TTC3-212ENST00000463216 PZPP20742 1482 aa37.8■■■■□ 3.64
TTC3-212ENST00000463216 MAST1Q9Y2H9 1570 aa37.79■■■■□ 3.64
TTC3-212ENST00000463216 DNMT1P26358 1616 aaKnown RBP37.79■■■■□ 3.64
TTC3-212ENST00000463216 FAM135AQ9P2D6 1515 aa37.78■■■■□ 3.64
TTC3-212ENST00000463216 ZNF335Q9H4Z2 1342 aaPredicted RBP37.78■■■■□ 3.64
TTC3-212ENST00000463216 TCOF1Q13428 1488 aaKnown RBP37.77■■■■□ 3.64
TTC3-212ENST00000463216 RNF17Q9BXT8 1623 aaKnown RBP37.69■■■■□ 3.62
TTC3-212ENST00000463216 EIF2AK4Q9P2K8 1649 aaKnown RBP37.65■■■■□ 3.62
TTC3-212ENST00000463216 IQSEC2Q5JU85 1478 aa37.65■■■■□ 3.62
TTC3-212ENST00000463216 PTPN23Q9H3S7 1636 aa37.65■■■■□ 3.62
TTC3-212ENST00000463216 ABCC3O15438 1527 aa37.64■■■■□ 3.62
TTC3-212ENST00000463216 POLR1AO95602 1720 aaPredicted RBP37.62■■■■□ 3.61
TTC3-212ENST00000463216 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP37.62■■■■□ 3.613e-9■■■■□ 21.4
TTC3-212ENST00000463216 DUOX2Q9NRD8 1548 aa37.61■■■■□ 3.61
TTC3-212ENST00000463216 ZC3H13Q5T200 1668 aaKnown RBP37.61■■■■□ 3.61
TTC3-212ENST00000463216 THEMISQ8N1K5 641 aaPredicted RBP37.61■■■■□ 3.61
TTC3-212ENST00000463216 RRP7BPQ9NSQ0 103 aa37.61■■■■□ 3.61
TTC3-212ENST00000463216 NLRP1Q9C000 1473 aa37.6■■■■□ 3.61
TTC3-212ENST00000463216 UGGT1Q9NYU2 1555 aa37.59■■■■□ 3.61
TTC3-212ENST00000463216 KIF15Q9NS87 1388 aa37.58■■■■□ 3.61
TTC3-212ENST00000463216 CFAP65Q6ZU64 1925 aaKnown RBP37.58■■■■□ 3.61
TTC3-212ENST00000463216 ANKLE2Q86XL3 938 aa37.58■■■■□ 3.61
TTC3-212ENST00000463216 ABCC5O15440 1437 aa37.58■■■■□ 3.61
TTC3-212ENST00000463216 CEP152O94986 1710 aa37.58■■■■□ 3.61
TTC3-212ENST00000463216 CROCC2H7BZ55 1655 aa37.57■■■■□ 3.61
TTC3-212ENST00000463216 MROH1Q8NDA8 1641 aa37.55■■■■□ 3.6
TTC3-212ENST00000463216 UBAP1LF5GYI3 381 aa37.55■■■■□ 3.6
TTC3-212ENST00000463216 NEURL4Q96JN8 1562 aa37.54■■■■□ 3.6
TTC3-212ENST00000463216 FGD6Q6ZV73 1430 aa37.53■■■■□ 3.6
TTC3-212ENST00000463216 SHANK2Q9UPX8 1470 aa37.52■■■■□ 3.6
TTC3-212ENST00000463216 DAPK1P53355 1430 aa37.52■■■■□ 3.6
TTC3-212ENST00000463216 GRWD1Q9BQ67 446 aaKnown RBP eCLIP37.51■■■■□ 3.65e-7■■□□□ 12.6
TTC3-212ENST00000463216 CHIC2Q9UKJ5 165 aa37.51■■■■□ 3.6
TTC3-212ENST00000463216 ERVK-7P63135 1459 aa37.5■■■■□ 3.59
TTC3-212ENST00000463216 SPATA31D1Q6ZQQ2 1576 aa37.5■■■■□ 3.59
TTC3-212ENST00000463216 ERBINQ96RT1 1412 aa37.46■■■■□ 3.59
TTC3-212ENST00000463216 DISP3Q9P2K9 1392 aa37.46■■■■□ 3.59
TTC3-212ENST00000463216 NPHP4O75161 1426 aaPredicted RBP37.43■■■■□ 3.58
TTC3-212ENST00000463216 PRDM15P57071 1507 aaPredicted RBP37.4■■■■□ 3.58
TTC3-212ENST00000463216 ANKRD30AQ9BXX3 1397 aa37.4■■■■□ 3.58
TTC3-212ENST00000463216 DEPDC5O75140 1603 aa37.39■■■■□ 3.58
TTC3-212ENST00000463216 FAM50AQ14320 339 aaKnown RBP37.38■■■■□ 3.57
TTC3-212ENST00000463216 KANK1Q14678 1352 aa37.37■■■■□ 3.57
TTC3-212ENST00000463216 SCAF1Q9H7N4 1312 aaKnown RBP37.36■■■■□ 3.57
TTC3-212ENST00000463216 CPS1P31327 1500 aa37.36■■■■□ 3.57
TTC3-212ENST00000463216 IQGAP1P46940 1657 aa37.35■■■■□ 3.57
TTC3-212ENST00000463216 MED14O60244 1454 aa37.35■■■■□ 3.57
TTC3-212ENST00000463216 UBR1Q8IWV7 1749 aa37.32■■■■□ 3.56
TTC3-212ENST00000463216 VWDEQ8N2E2 1590 aa37.31■■■■□ 3.56
TTC3-212ENST00000463216 ARHGAP31Q2M1Z3 1444 aa37.31■■■■□ 3.56
TTC3-212ENST00000463216 PIP4K2BP78356 416 aa37.3■■■■□ 3.56
TTC3-212ENST00000463216 TOM1O60784 492 aa37.26■■■■□ 3.56
TTC3-212ENST00000463216 STAG3Q9UJ98 1225 aa37.25■■■■□ 3.55
TTC3-212ENST00000463216 TXNDC2Q86VQ3 553 aa37.22■■■■□ 3.55
TTC3-212ENST00000463216 ILDR2Q71H61 639 aa37.21■■■■□ 3.55
TTC3-212ENST00000463216 SCAF11Q99590 1463 aaKnown RBP37.2■■■■□ 3.55
TTC3-212ENST00000463216 LTKP29376 864 aa37.19■■■■□ 3.54
TTC3-212ENST00000463216 PIK3C2BO00750 1634 aa37.18■■■■□ 3.54
TTC3-212ENST00000463216 EID1Q9Y6B2 187 aa37.18■■■■□ 3.54
TTC3-212ENST00000463216 ADGRL2O95490 1459 aa37.17■■■■□ 3.54
TTC3-212ENST00000463216 STRCP1A6NGW2 1772 aa37.15■■■■□ 3.54
TTC3-212ENST00000463216 LMTK2Q8IWU2 1503 aa37.15■■■■□ 3.54
TTC3-212ENST00000463216 SLIT1O75093 1534 aa37.13■■■■□ 3.53
TTC3-212ENST00000463216 ARHGAP23Q9P227 1491 aa37.13■■■■□ 3.53
TTC3-212ENST00000463216 IDI1Q13907 227 aa37.12■■■■□ 3.53
TTC3-212ENST00000463216 HSPA1LP34931 641 aa37.11■■■■□ 3.53
TTC3-212ENST00000463216 ANKRD50Q9ULJ7 1429 aa37.1■■■■□ 3.53
TTC3-212ENST00000463216 EFCAB6Q5THR3 1501 aa37.08■■■■□ 3.53
TTC3-212ENST00000463216 TMEM2Q9UHN6 1383 aa37.07■■■■□ 3.53
TTC3-212ENST00000463216 LRRC7Q96NW7 1537 aa37.07■■■■□ 3.53
TTC3-212ENST00000463216 SYNMO15061 1565 aa37.06■■■■□ 3.52
TTC3-212ENST00000463216 PPARGC1BQ86YN6 1023 aaKnown RBP37.04■■■■□ 3.52
TTC3-212ENST00000463216 SENP3Q9H4L4 574 aaPredicted RBP37.04■■■■□ 3.52
TTC3-212ENST00000463216 NOS1P29475 1434 aa37.01■■■■□ 3.51
TTC3-212ENST00000463216 ITGAEP38570 1179 aa36.98■■■■□ 3.51
TTC3-212ENST00000463216 KDM5AP29375 1690 aaKnown RBP36.98■■■■□ 3.51
TTC3-212ENST00000463216 ALKQ9UM73 1620 aa36.97■■■■□ 3.51
TTC3-212ENST00000463216 SLC52A1Q9NWF4 448 aa36.96■■■■□ 3.51
TTC3-212ENST00000463216 BCANQ96GW7 911 aa36.95■■■■□ 3.51
TTC3-212ENST00000463216 ADGRB3O60242 1522 aa36.94■■■■□ 3.5
TTC3-212ENST00000463216 SLC26A8Q96RN1 970 aa36.93■■■■□ 3.5
TTC3-212ENST00000463216 SOCS7O14512 581 aa36.92■■■■□ 3.5
TTC3-212ENST00000463216 TET3O43151 1660 aa36.92■■■■□ 3.5
TTC3-212ENST00000463216 RPRD2Q5VT52 1461 aaKnown RBP36.91■■■■□ 3.5
TTC3-212ENST00000463216 UNC13BO14795 1591 aa36.86■■■■□ 3.49
TTC3-212ENST00000463216 GCC2Q8IWJ2 1684 aa36.86■■■■□ 3.49
TTC3-212ENST00000463216 CHGAP10645 457 aaKnown RBP36.85■■■■□ 3.49
TTC3-212ENST00000463216 ROCK1Q13464 1354 aa36.85■■■■□ 3.49
TTC3-212ENST00000463216 XIRP1Q702N8 1843 aaKnown RBP36.85■■■■□ 3.49
TTC3-212ENST00000463216 MYO5BQ9ULV0 1848 aa36.84■■■■□ 3.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms