RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 TSPY10P0CW01 314 aa31.49■■■□□ 2.63
VARS-221ENST00000463184 FAM135AQ9P2D6 1515 aa31.49■■■□□ 2.63
VARS-221ENST00000463184 WASHC2CQ9Y4E1 1318 aa31.47■■■□□ 2.63
VARS-221ENST00000463184 FBXO31Q5XUX0 539 aaPredicted RBP31.46■■■□□ 2.63
VARS-221ENST00000463184 DNMT1P26358 1616 aaKnown RBP31.46■■■□□ 2.63
VARS-221ENST00000463184 TNRQ92752 1358 aa31.45■■■□□ 2.63
VARS-221ENST00000463184 KDM5DQ9BY66 1539 aa31.45■■■□□ 2.63
VARS-221ENST00000463184 ARHGEF5Q12774 1597 aa31.44■■■□□ 2.62
VARS-221ENST00000463184 PZPP20742 1482 aa31.44■■■□□ 2.62
VARS-221ENST00000463184 VPS8Q8N3P4 1428 aa31.41■■■□□ 2.62
VARS-221ENST00000463184 LRRC9Q6ZRR7 1453 aa31.4■■■□□ 2.62
VARS-221ENST00000463184 UBAP1LF5GYI3 381 aa31.4■■■□□ 2.62
VARS-221ENST00000463184 ILDR2Q71H61 639 aa31.37■■■□□ 2.61
VARS-221ENST00000463184 MIA2Q96PC5 1412 aa31.35■■■□□ 2.61
VARS-221ENST00000463184 LOC105371045A0A1W2PR82 267 aa31.35■■■□□ 2.61
VARS-221ENST00000463184 THEMISQ8N1K5 641 aaPredicted RBP31.34■■■□□ 2.61
VARS-221ENST00000463184 ANKLE2Q86XL3 938 aa31.32■■■□□ 2.6
VARS-221ENST00000463184 NLRP1Q9C000 1473 aa31.32■■■□□ 2.6
VARS-221ENST00000463184 SPATA31D1Q6ZQQ2 1576 aa31.3■■■□□ 2.6
VARS-221ENST00000463184 MAP3K1Q13233 1512 aa31.29■■■□□ 2.6
VARS-221ENST00000463184 KANK4Q5T7N3 995 aaPredicted RBP31.29■■■□□ 2.6
VARS-221ENST00000463184 MAST1Q9Y2H9 1570 aa31.29■■■□□ 2.6
VARS-221ENST00000463184 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.29■■■□□ 2.6
VARS-221ENST00000463184 POLR1AO95602 1720 aaPredicted RBP31.28■■■□□ 2.6
VARS-221ENST00000463184 NEURL4Q96JN8 1562 aa31.27■■■□□ 2.6
VARS-221ENST00000463184 UGGT1Q9NYU2 1555 aa31.26■■■□□ 2.59
VARS-221ENST00000463184 SOCS7O14512 581 aa31.25■■■□□ 2.59
VARS-221ENST00000463184 RNF17Q9BXT8 1623 aaKnown RBP31.24■■■□□ 2.59
VARS-221ENST00000463184 CPS1P31327 1500 aa31.24■■■□□ 2.59
VARS-221ENST00000463184 MYOM3Q5VTT5 1437 aa31.24■■■□□ 2.59
VARS-221ENST00000463184 SHANK2Q9UPX8 1470 aa31.22■■■□□ 2.59
VARS-221ENST00000463184 ABCC3O15438 1527 aa31.21■■■□□ 2.59
VARS-221ENST00000463184 EIF2AK4Q9P2K8 1649 aaKnown RBP31.2■■■□□ 2.58
VARS-221ENST00000463184 ZC3H13Q5T200 1668 aaKnown RBP31.19■■■□□ 2.58
VARS-221ENST00000463184 MED14O60244 1454 aa31.19■■■□□ 2.58
VARS-221ENST00000463184 TOM1O60784 492 aa31.18■■■□□ 2.58
VARS-221ENST00000463184 NPHP4O75161 1426 aaPredicted RBP31.17■■■□□ 2.58
VARS-221ENST00000463184 DEPDC5O75140 1603 aa31.16■■■□□ 2.58
VARS-221ENST00000463184 DUOX2Q9NRD8 1548 aa31.14■■■□□ 2.57
VARS-221ENST00000463184 ERVK-7P63135 1459 aa31.13■■■□□ 2.57
VARS-221ENST00000463184 VWDEQ8N2E2 1590 aa31.13■■■□□ 2.57
VARS-221ENST00000463184 SCAF1Q9H7N4 1312 aaKnown RBP31.12■■■□□ 2.57
VARS-221ENST00000463184 MROH1Q8NDA8 1641 aa31.11■■■□□ 2.57
VARS-221ENST00000463184 PIP4K2BP78356 416 aa31.1■■■□□ 2.57
VARS-221ENST00000463184 APLP2Q06481 763 aa31.09■■■□□ 2.57
VARS-221ENST00000463184 HSPA1LP34931 641 aa31.07■■■□□ 2.56
VARS-221ENST00000463184 IQGAP1P46940 1657 aa31.06■■■□□ 2.56
VARS-221ENST00000463184 KIF15Q9NS87 1388 aa31.06■■■□□ 2.56
VARS-221ENST00000463184 ABCC5O15440 1437 aa31.05■■■□□ 2.56
VARS-221ENST00000463184 CEP152O94986 1710 aa31.04■■■□□ 2.56
VARS-221ENST00000463184 RRP7BPQ9NSQ0 103 aa31.04■■■□□ 2.56
VARS-221ENST00000463184 ERBINQ96RT1 1412 aa31.03■■■□□ 2.56
VARS-221ENST00000463184 ARHGAP31Q2M1Z3 1444 aa31.02■■■□□ 2.56
VARS-221ENST00000463184 CFAP65Q6ZU64 1925 aaKnown RBP31■■■□□ 2.55
VARS-221ENST00000463184 PTPN23Q9H3S7 1636 aa31■■■□□ 2.55
VARS-221ENST00000463184 PRDM15P57071 1507 aaPredicted RBP30.99■■■□□ 2.55
VARS-221ENST00000463184 UBR1Q8IWV7 1749 aa30.98■■■□□ 2.55
VARS-221ENST00000463184 DAPK1P53355 1430 aa30.97■■■□□ 2.55
VARS-221ENST00000463184 CROCC2H7BZ55 1655 aa30.97■■■□□ 2.55
VARS-221ENST00000463184 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.96■■■□□ 2.55
VARS-221ENST00000463184 SCAF11Q99590 1463 aaKnown RBP30.95■■■□□ 2.55
VARS-221ENST00000463184 TXNDC2Q86VQ3 553 aa30.94■■■□□ 2.54
VARS-221ENST00000463184 LRRC7Q96NW7 1537 aa30.93■■■□□ 2.54
VARS-221ENST00000463184 KANK1Q14678 1352 aa30.93■■■□□ 2.54
VARS-221ENST00000463184 FGD6Q6ZV73 1430 aa30.93■■■□□ 2.54
VARS-221ENST00000463184 LTKP29376 864 aa30.93■■■□□ 2.54
VARS-221ENST00000463184 ARHGAP23Q9P227 1491 aa30.93■■■□□ 2.54
VARS-221ENST00000463184 SLIT1O75093 1534 aa30.92■■■□□ 2.54
VARS-221ENST00000463184 STRCP1A6NGW2 1772 aa30.92■■■□□ 2.54
VARS-221ENST00000463184 EID1Q9Y6B2 187 aa30.91■■■□□ 2.54
VARS-221ENST00000463184 ALKQ9UM73 1620 aa30.91■■■□□ 2.54
VARS-221ENST00000463184 ANKRD30AQ9BXX3 1397 aa30.9■■■□□ 2.54
VARS-221ENST00000463184 SYNMO15061 1565 aa30.88■■■□□ 2.53
VARS-221ENST00000463184 CHIC2Q9UKJ5 165 aa30.87■■■□□ 2.53
VARS-221ENST00000463184 STAG3Q9UJ98 1225 aa30.86■■■□□ 2.53
VARS-221ENST00000463184 MED1Q15648 1581 aaPredicted RBP30.86■■■□□ 2.53
VARS-221ENST00000463184 TMEM2Q9UHN6 1383 aa30.83■■■□□ 2.53
VARS-221ENST00000463184 LMTK2Q8IWU2 1503 aa30.83■■■□□ 2.53
VARS-221ENST00000463184 PIK3C2BO00750 1634 aa30.81■■■□□ 2.52
VARS-221ENST00000463184 IDI1Q13907 227 aa30.8■■■□□ 2.52
VARS-221ENST00000463184 KDM5AP29375 1690 aaKnown RBP30.75■■■□□ 2.51
VARS-221ENST00000463184 EFCAB6Q5THR3 1501 aa30.75■■■□□ 2.51
VARS-221ENST00000463184 PHF23Q9BUL5 403 aaPredicted RBP30.73■■■□□ 2.51
VARS-221ENST00000463184 ADGRL2O95490 1459 aa30.73■■■□□ 2.51
VARS-221ENST00000463184 NOS1P29475 1434 aa30.73■■■□□ 2.51
VARS-221ENST00000463184 SENP3Q9H4L4 574 aaPredicted RBP30.72■■■□□ 2.51
VARS-221ENST00000463184 SLC52A1Q9NWF4 448 aa30.72■■■□□ 2.51
VARS-221ENST00000463184 FAM50AQ14320 339 aaKnown RBP30.7■■■□□ 2.51
VARS-221ENST00000463184 KCNA6P17658 529 aa30.68■■■□□ 2.5
VARS-221ENST00000463184 XIRP1Q702N8 1843 aaKnown RBP30.66■■■□□ 2.5
VARS-221ENST00000463184 ANKRD50Q9ULJ7 1429 aa30.65■■■□□ 2.5
VARS-221ENST00000463184 SLC26A8Q96RN1 970 aa30.64■■■□□ 2.5
VARS-221ENST00000463184 TET3O43151 1660 aa30.64■■■□□ 2.5
VARS-221ENST00000463184 TMEM94Q12767 1356 aa30.63■■■□□ 2.49
VARS-221ENST00000463184 RPRD2Q5VT52 1461 aaKnown RBP30.63■■■□□ 2.49
VARS-221ENST00000463184 ADGRB3O60242 1522 aa30.63■■■□□ 2.49
VARS-221ENST00000463184 FAM135BQ49AJ0 1406 aa30.61■■■□□ 2.49
VARS-221ENST00000463184 PROSER2Q86WR7 435 aaPredicted RBP30.6■■■□□ 2.49
VARS-221ENST00000463184 BCANQ96GW7 911 aa30.57■■■□□ 2.48
VARS-221ENST00000463184 HDGFP51858 240 aaKnown RBP30.56■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms