RNA–Protein interactions for RNA: ENST00000463097.1

COPS3-205, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 288 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-205ENST00000463097 ZBTB7CA1YPR0 619 aa10.25□□□□□ -0.77
COPS3-205ENST00000463097 ATMINO43313 823 aaPredicted RBP10.25□□□□□ -0.77
COPS3-205ENST00000463097 CLCN6P51797 869 aa10.25□□□□□ -0.77
COPS3-205ENST00000463097 CDHR5Q9HBB8 845 aa10.25□□□□□ -0.77
COPS3-205ENST00000463097 ANO8Q9HCE9 1232 aaPredicted RBP10.25□□□□□ -0.77
COPS3-205ENST00000463097 EN1Q05925 392 aaPredicted RBP10.24□□□□□ -0.77
COPS3-205ENST00000463097 NPM2Q86SE8 214 aaKnown RBP10.24□□□□□ -0.77
COPS3-205ENST00000463097 PROSER2Q86WR7 435 aaPredicted RBP10.24□□□□□ -0.77
COPS3-205ENST00000463097 PTCD2Q8WV60 388 aaKnown RBP10.24□□□□□ -0.77
COPS3-205ENST00000463097 ASTLQ6HA08 431 aaPredicted RBP10.23□□□□□ -0.77
COPS3-205ENST00000463097 PHOX2BQ99453 314 aa10.23□□□□□ -0.77
COPS3-205ENST00000463097 EPAS1Q99814 870 aa10.23□□□□□ -0.77
COPS3-205ENST00000463097 ZNF777Q9ULD5 760 aaPredicted RBP10.23□□□□□ -0.77
COPS3-205ENST00000463097 PROCA1Q8NCQ7 364 aaPredicted RBP10.22□□□□□ -0.77
COPS3-205ENST00000463097 BEGAINQ9BUH8 593 aa10.22□□□□□ -0.77
COPS3-205ENST00000463097 ATP1B4Q9UN42 357 aaPredicted RBP10.22□□□□□ -0.77
COPS3-205ENST00000463097 MAP3K7O43318 606 aa10.21□□□□□ -0.77
COPS3-205ENST00000463097 RAD21O60216 631 aa10.21□□□□□ -0.77
COPS3-205ENST00000463097 PHF14O94880 888 aa10.21□□□□□ -0.77
COPS3-205ENST00000463097 FNBP4Q8N3X1 1017 aaPredicted RBP10.2□□□□□ -0.78
COPS3-205ENST00000463097 POM121Q96HA1 1249 aa10.19□□□□□ -0.78
COPS3-205ENST00000463097 POLR3EQ9NVU0 708 aa10.19□□□□□ -0.78
COPS3-205ENST00000463097 FAM217BQ9NTX9 383 aaPredicted RBP10.18□□□□□ -0.78
COPS3-205ENST00000463097 SERPINA10Q9UK55 444 aa10.18□□□□□ -0.78
COPS3-205ENST00000463097 SLC34A2O95436 690 aa10.17□□□□□ -0.78
COPS3-205ENST00000463097 NECTIN2Q92692 538 aa10.17□□□□□ -0.78
COPS3-205ENST00000463097 RBM33Q96EV2 1170 aaKnown RBP10.17□□□□□ -0.78
COPS3-205ENST00000463097 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.16□□□□□ -0.78
COPS3-205ENST00000463097 SPDYE5A6NIY4 337 aa10.15□□□□□ -0.78
COPS3-205ENST00000463097 OATP04181 439 aa10.15□□□□□ -0.78
COPS3-205ENST00000463097 TSR1Q2NL82 804 aaKnown RBP10.15□□□□□ -0.78
COPS3-205ENST00000463097 SLAIN1Q8ND83 568 aa10.15□□□□□ -0.78
COPS3-205ENST00000463097 CCDC97Q96F63 343 aaPredicted RBP10.15□□□□□ -0.78
COPS3-205ENST00000463097 CCDC9Q9Y3X0 531 aaKnown RBP10.15□□□□□ -0.78
COPS3-205ENST00000463097 PCDHGA10Q9Y5H3 936 aa10.15□□□□□ -0.78
COPS3-205ENST00000463097 MYSM1Q5VVJ2 828 aa10.14□□□□□ -0.79
COPS3-205ENST00000463097 METTL3Q86U44 580 aaKnown RBP10.14□□□□□ -0.79
COPS3-205ENST00000463097 TYW1BQ6NUM6 668 aa10.13□□□□□ -0.79
COPS3-205ENST00000463097 SEC24BO95487 1268 aa10.12□□□□□ -0.79
COPS3-205ENST00000463097 FAM161AQ3B820 660 aa10.12□□□□□ -0.79
COPS3-205ENST00000463097 BANK1Q8NDB2 785 aa10.12□□□□□ -0.79
COPS3-205ENST00000463097 TRAIPQ9BWF2 469 aa10.12□□□□□ -0.79
COPS3-205ENST00000463097 COG6Q9Y2V7 657 aa10.12□□□□□ -0.79
COPS3-205ENST00000463097 CLK2P49760 499 aaKnown RBP10.11□□□□□ -0.79
COPS3-205ENST00000463097 NLRP7Q8WX94 980 aa10.11□□□□□ -0.79
COPS3-205ENST00000463097 FBXW7Q969H0 707 aa10.11□□□□□ -0.79
COPS3-205ENST00000463097 COLQQ9Y215 455 aaPredicted RBP10.1□□□□□ -0.79
COPS3-205ENST00000463097 RFC5P40937 340 aa10.09□□□□□ -0.79
COPS3-205ENST00000463097 CERKQ8TCT0 537 aa10.09□□□□□ -0.79
COPS3-205ENST00000463097 PXYLP1Q8TE99 480 aa10.09□□□□□ -0.79
COPS3-205ENST00000463097 SNRKQ9NRH2 765 aa10.09□□□□□ -0.79
COPS3-205ENST00000463097 PLSCR2Q9NRY7 297 aa10.09□□□□□ -0.79
COPS3-205ENST00000463097 ADGRG1Q9Y653 693 aa10.09□□□□□ -0.79
COPS3-205ENST00000463097 HAX1O00165 279 aa10.08□□□□□ -0.8
COPS3-205ENST00000463097 DIXDC1Q155Q3 683 aa10.08□□□□□ -0.8
COPS3-205ENST00000463097 PADI6Q6TGC4 694 aa10.08□□□□□ -0.8
COPS3-205ENST00000463097 TBC1D2Q9BYX2 928 aa10.08□□□□□ -0.8
COPS3-205ENST00000463097 EVX2Q03828 476 aa10.07□□□□□ -0.8
COPS3-205ENST00000463097 TMEM259Q4ZIN3 620 aa10.07□□□□□ -0.8
COPS3-205ENST00000463097 KCTD17Q8N5Z5 321 aa10.07□□□□□ -0.8
COPS3-205ENST00000463097 ZNF330Q9Y3S2 320 aaPredicted RBP10.07□□□□□ -0.8
COPS3-205ENST00000463097 JPH4Q96JJ6 628 aa10.06□□□□□ -0.8
COPS3-205ENST00000463097 C3orf67Q6ZVT6 689 aa10.05□□□□□ -0.8
COPS3-205ENST00000463097 PPP2R2DQ66LE6 453 aa10.04□□□□□ -0.8
COPS3-205ENST00000463097 TTC13Q8NBP0 860 aa10.04□□□□□ -0.8
COPS3-205ENST00000463097 PCDHGA4Q9Y5G9 962 aa10.04□□□□□ -0.8
COPS3-205ENST00000463097 C6orf132Q5T0Z8 1188 aa10.03□□□□□ -0.8
COPS3-205ENST00000463097 FBXO31Q5XUX0 539 aaPredicted RBP10.03□□□□□ -0.8
COPS3-205ENST00000463097 PELP1Q8IZL8 1130 aaKnown RBP10.03□□□□□ -0.8
COPS3-205ENST00000463097 RBM27Q9P2N5 1060 aaKnown RBP10.03□□□□□ -0.8
COPS3-205ENST00000463097 LIMD1Q9UGP4 676 aa10.02□□□□□ -0.81
COPS3-205ENST00000463097 RIC3Q7Z5B4 369 aa10.01□□□□□ -0.81
COPS3-205ENST00000463097 KDM4FA0A1W2PPD8 638 aa10□□□□□ -0.81
COPS3-205ENST00000463097 FOSBP53539 338 aa10□□□□□ -0.81
COPS3-205ENST00000463097 AEBP1Q8IUX7 1158 aa10□□□□□ -0.81
COPS3-205ENST00000463097 RBM46Q8TBY0 533 aaKnown RBP10□□□□□ -0.81
COPS3-205ENST00000463097 POTEFA5A3E0 1075 aa9.99□□□□□ -0.81
COPS3-205ENST00000463097 WWC1Q8IX03 1113 aa9.99□□□□□ -0.81
COPS3-205ENST00000463097 RETREG2Q8NC44 543 aa9.99□□□□□ -0.81
COPS3-205ENST00000463097 MTMR14Q8NCE2 650 aa9.99□□□□□ -0.81
COPS3-205ENST00000463097 SPIRE2Q8WWL2 714 aa9.99□□□□□ -0.81
COPS3-205ENST00000463097 SLC39A7Q92504 469 aa9.99□□□□□ -0.81
COPS3-205ENST00000463097 GDPD2Q9HCC8 539 aa9.99□□□□□ -0.81
COPS3-205ENST00000463097 TUSC1Q2TAM9 212 aa9.98□□□□□ -0.81
COPS3-205ENST00000463097 ZDHHC16Q969W1 377 aa9.98□□□□□ -0.81
COPS3-205ENST00000463097 PRSS12P56730 875 aa9.97□□□□□ -0.81
COPS3-205ENST00000463097 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.96□□□□□ -0.82
COPS3-205ENST00000463097 SPTLC1O15269 473 aa9.96□□□□□ -0.82
COPS3-205ENST00000463097 PPP1R15AO75807 674 aaPredicted RBP9.96□□□□□ -0.82
COPS3-205ENST00000463097 C7P10643 843 aa9.96□□□□□ -0.82
COPS3-205ENST00000463097 PRM3Q9NNZ6 103 aa9.96□□□□□ -0.82
COPS3-205ENST00000463097 SOCS7O14512 581 aa9.95□□□□□ -0.82
COPS3-205ENST00000463097 ZNF454Q8N9F8 522 aa9.95□□□□□ -0.82
COPS3-205ENST00000463097 CDCA7LQ96GN5 454 aa9.95□□□□□ -0.82
COPS3-205ENST00000463097 CALR3Q96L12 384 aaKnown RBP9.95□□□□□ -0.82
COPS3-205ENST00000463097 DCBLD2Q96PD2 775 aa9.95□□□□□ -0.82
COPS3-205ENST00000463097 ABL2P42684 1182 aa9.94□□□□□ -0.82
COPS3-205ENST00000463097 RSBN1LQ6PCB5 846 aaPredicted RBP9.94□□□□□ -0.82
COPS3-205ENST00000463097 ACIN1Q9UKV3 1341 aaKnown RBP9.93□□□□□ -0.82
COPS3-205ENST00000463097 CD46P15529 392 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms