RNA–Protein interactions for RNA: ENST00000462488.1

PGBD2-203, Transcript of piggyBac transposable element derived 2, humanhuman

TSL 5

Gene PGBD2, Length 282 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD2-203ENST00000462488 ANKRD30AQ9BXX3 1397 aa12.74□□□□□ -0.37
PGBD2-203ENST00000462488 DNMT1P26358 1616 aaKnown RBP12.73□□□□□ -0.37
PGBD2-203ENST00000462488 UHRF1BP1Q6BDS2 1440 aa12.73□□□□□ -0.37
PGBD2-203ENST00000462488 CROCC2H7BZ55 1655 aa12.73□□□□□ -0.37
PGBD2-203ENST00000462488 DUOX2Q9NRD8 1548 aa12.72□□□□□ -0.37
PGBD2-203ENST00000462488 LMTK3Q96Q04 1460 aa12.72□□□□□ -0.37
PGBD2-203ENST00000462488 SHANK2Q9UPX8 1470 aa12.72□□□□□ -0.37
PGBD2-203ENST00000462488 PREX1Q8TCU6 1659 aa12.71□□□□□ -0.37
PGBD2-203ENST00000462488 MROH2AA6NES4 1674 aa12.7□□□□□ -0.38
PGBD2-203ENST00000462488 KANK1Q14678 1352 aa12.69□□□□□ -0.38
PGBD2-203ENST00000462488 KDM5DQ9BY66 1539 aa12.68□□□□□ -0.38
PGBD2-203ENST00000462488 FBXO31Q5XUX0 539 aaPredicted RBP12.67□□□□□ -0.38
PGBD2-203ENST00000462488 ERBINQ96RT1 1412 aa12.67□□□□□ -0.38
PGBD2-203ENST00000462488 CFAP65Q6ZU64 1925 aaKnown RBP12.66□□□□□ -0.38
PGBD2-203ENST00000462488 EIF2AK4Q9P2K8 1649 aaKnown RBP12.66□□□□□ -0.38
PGBD2-203ENST00000462488 NPATQ14207 1427 aa12.66□□□□□ -0.38
PGBD2-203ENST00000462488 NCOA1Q15788 1441 aa12.66□□□□□ -0.38
PGBD2-203ENST00000462488 PTPRKQ15262 1439 aa12.64□□□□□ -0.39
PGBD2-203ENST00000462488 RNF17Q9BXT8 1623 aaKnown RBP12.64□□□□□ -0.39
PGBD2-203ENST00000462488 DMRT2Q9Y5R5 561 aa12.64□□□□□ -0.39
PGBD2-203ENST00000462488 TNRQ92752 1358 aa12.64□□□□□ -0.39
PGBD2-203ENST00000462488 ANKRD50Q9ULJ7 1429 aa12.62□□□□□ -0.39
PGBD2-203ENST00000462488 FAM135AQ9P2D6 1515 aa12.62□□□□□ -0.39
PGBD2-203ENST00000462488 CEP152O94986 1710 aa12.62□□□□□ -0.39
PGBD2-203ENST00000462488 ABCC3O15438 1527 aa12.62□□□□□ -0.39
PGBD2-203ENST00000462488 ZC3H13Q5T200 1668 aaKnown RBP12.61□□□□□ -0.39
PGBD2-203ENST00000462488 ADGRL2O95490 1459 aa12.61□□□□□ -0.39
PGBD2-203ENST00000462488 PZPP20742 1482 aa12.61□□□□□ -0.39
PGBD2-203ENST00000462488 STAG3Q9UJ98 1225 aa12.6□□□□□ -0.39
PGBD2-203ENST00000462488 MYO3AQ8NEV4 1616 aa12.59□□□□□ -0.39
PGBD2-203ENST00000462488 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.59□□□□□ -0.39
PGBD2-203ENST00000462488 NCKAP5LQ9HCH0 1330 aa12.59□□□□□ -0.39
PGBD2-203ENST00000462488 CAMSAP1Q5T5Y3 1602 aa12.59□□□□□ -0.39
PGBD2-203ENST00000462488 ROCK1Q13464 1354 aa12.58□□□□□ -0.4
PGBD2-203ENST00000462488 THEMISQ8N1K5 641 aaPredicted RBP12.58□□□□□ -0.4
PGBD2-203ENST00000462488 CEP170BQ9Y4F5 1589 aaPredicted RBP12.58□□□□□ -0.4
PGBD2-203ENST00000462488 MROH1Q8NDA8 1641 aa12.58□□□□□ -0.4
PGBD2-203ENST00000462488 PRDM15P57071 1507 aaPredicted RBP12.57□□□□□ -0.4
PGBD2-203ENST00000462488 RRBP1Q9P2E9 1410 aaKnown RBP12.57□□□□□ -0.4
PGBD2-203ENST00000462488 A2ML1A8K2U0 1454 aa12.57□□□□□ -0.4
PGBD2-203ENST00000462488 ERVK-7P63135 1459 aa12.55□□□□□ -0.4
PGBD2-203ENST00000462488 TRIM52Q96A61 297 aa12.55□□□□□ -0.4
PGBD2-203ENST00000462488 DEPDC5O75140 1603 aa12.55□□□□□ -0.4
PGBD2-203ENST00000462488 NUP155O75694 1391 aa12.55□□□□□ -0.4
PGBD2-203ENST00000462488 NLRP1Q9C000 1473 aa12.54□□□□□ -0.4
PGBD2-203ENST00000462488 STRCQ7RTU9 1775 aa12.54□□□□□ -0.4
PGBD2-203ENST00000462488 PKD2Q13563 968 aa12.54□□□□□ -0.4
PGBD2-203ENST00000462488 ANKLE2Q86XL3 938 aa12.54□□□□□ -0.4
PGBD2-203ENST00000462488 ZNF142P52746 1687 aaPredicted RBP12.54□□□□□ -0.4
PGBD2-203ENST00000462488 UGGT1Q9NYU2 1555 aa12.53□□□□□ -0.4
PGBD2-203ENST00000462488 CHGAP10645 457 aaKnown RBP12.52□□□□□ -0.41
PGBD2-203ENST00000462488 ARHGAP31Q2M1Z3 1444 aa12.52□□□□□ -0.41
PGBD2-203ENST00000462488 SPATA31D1Q6ZQQ2 1576 aa12.51□□□□□ -0.41
PGBD2-203ENST00000462488 BCANQ96GW7 911 aa12.5□□□□□ -0.41
PGBD2-203ENST00000462488 EID1Q9Y6B2 187 aa12.5□□□□□ -0.41
PGBD2-203ENST00000462488 PTPRTO14522 1441 aa12.5□□□□□ -0.41
PGBD2-203ENST00000462488 PLA2R1Q13018 1463 aa12.5□□□□□ -0.41
PGBD2-203ENST00000462488 EFCAB6Q5THR3 1501 aa12.49□□□□□ -0.41
PGBD2-203ENST00000462488 LMTK2Q8IWU2 1503 aa12.49□□□□□ -0.41
PGBD2-203ENST00000462488 UNC13BO14795 1591 aa12.48□□□□□ -0.41
PGBD2-203ENST00000462488 IDI1Q13907 227 aa12.48□□□□□ -0.41
PGBD2-203ENST00000462488 ILDR1Q86SU0 546 aaPredicted RBP12.48□□□□□ -0.41
PGBD2-203ENST00000462488 TXNDC2Q86VQ3 553 aa12.48□□□□□ -0.41
PGBD2-203ENST00000462488 CERKQ8TCT0 537 aa12.48□□□□□ -0.41
PGBD2-203ENST00000462488 TET3O43151 1660 aa12.48□□□□□ -0.41
PGBD2-203ENST00000462488 VWDEQ8N2E2 1590 aa12.47□□□□□ -0.41
PGBD2-203ENST00000462488 FOXD1Q16676 465 aa12.47□□□□□ -0.41
PGBD2-203ENST00000462488 SLC52A1Q9NWF4 448 aa12.47□□□□□ -0.41
PGBD2-203ENST00000462488 NAIPQ13075 1403 aa12.46□□□□□ -0.41
PGBD2-203ENST00000462488 POLR1AO95602 1720 aaPredicted RBP12.46□□□□□ -0.41
PGBD2-203ENST00000462488 GCC2Q8IWJ2 1684 aa12.46□□□□□ -0.41
PGBD2-203ENST00000462488 RPRD2Q5VT52 1461 aaKnown RBP12.46□□□□□ -0.42
PGBD2-203ENST00000462488 PPP1R15AO75807 674 aaPredicted RBP12.45□□□□□ -0.42
PGBD2-203ENST00000462488 PIK3C2BO00750 1634 aa12.44□□□□□ -0.42
PGBD2-203ENST00000462488 IQGAP3Q86VI3 1631 aa12.44□□□□□ -0.42
PGBD2-203ENST00000462488 ZNF335Q9H4Z2 1342 aaPredicted RBP12.44□□□□□ -0.42
PGBD2-203ENST00000462488 FBXO41Q8TF61 875 aa12.44□□□□□ -0.42
PGBD2-203ENST00000462488 SLC4A1APQ9BWU0 796 aaKnown RBP12.44□□□□□ -0.42
PGBD2-203ENST00000462488 UBR1Q8IWV7 1749 aa12.44□□□□□ -0.42
PGBD2-203ENST00000462488 HFM1A2PYH4 1435 aa12.44□□□□□ -0.42
PGBD2-203ENST00000462488 HDGFP51858 240 aaKnown RBP12.43□□□□□ -0.42
PGBD2-203ENST00000462488 NPHP4O75161 1426 aaPredicted RBP12.43□□□□□ -0.42
PGBD2-203ENST00000462488 E9PCH4 1651 aa12.42□□□□□ -0.42
PGBD2-203ENST00000462488 ZNF326Q5BKZ1 582 aaKnown RBP12.42□□□□□ -0.42
PGBD2-203ENST00000462488 NOS1P29475 1434 aa12.42□□□□□ -0.42
PGBD2-203ENST00000462488 SYNMO15061 1565 aa12.42□□□□□ -0.42
PGBD2-203ENST00000462488 LTKP29376 864 aa12.41□□□□□ -0.42
PGBD2-203ENST00000462488 SCAF11Q99590 1463 aaKnown RBP12.4□□□□□ -0.42
PGBD2-203ENST00000462488 TMEM2Q9UHN6 1383 aa12.4□□□□□ -0.42
PGBD2-203ENST00000462488 IQGAP1P46940 1657 aa12.39□□□□□ -0.43
PGBD2-203ENST00000462488 NUTM2DQ5VT03 806 aaPredicted RBP12.39□□□□□ -0.43
PGBD2-203ENST00000462488 NEURL4Q96JN8 1562 aa12.39□□□□□ -0.43
PGBD2-203ENST00000462488 ADGRB3O60242 1522 aa12.38□□□□□ -0.43
PGBD2-203ENST00000462488 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.37□□□□□ -0.43
PGBD2-203ENST00000462488 SLC26A8Q96RN1 970 aa12.37□□□□□ -0.43
PGBD2-203ENST00000462488 MYO5BQ9ULV0 1848 aa12.37□□□□□ -0.43
PGBD2-203ENST00000462488 SLIT1O75093 1534 aa12.37□□□□□ -0.43
PGBD2-203ENST00000462488 SETD5Q9C0A6 1442 aa12.37□□□□□ -0.43
PGBD2-203ENST00000462488 SCAF1Q9H7N4 1312 aaKnown RBP12.37□□□□□ -0.43
PGBD2-203ENST00000462488 MED14O60244 1454 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms