RNA–Protein interactions for RNA: ENST00000462309.1

COL4A2-203, Transcript of collagen type IV alpha 2 chain, humanhuman

TSL 3

Gene COL4A2, Length 725 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-203ENST00000462309 PARP9Q8IXQ6 854 aa15.16■□□□□ 0.02
COL4A2-203ENST00000462309 PCDHGA4Q9Y5G9 962 aa15.16■□□□□ 0.02
COL4A2-203ENST00000462309 KDM4FA0A1W2PPD8 638 aa15.15■□□□□ 0.02
COL4A2-203ENST00000462309 PCDHGA10Q9Y5H3 936 aa15.14■□□□□ 0.01
COL4A2-203ENST00000462309 CDHR5Q9HBB8 845 aa15.12■□□□□ 0.01
COL4A2-203ENST00000462309 PLEKHG3A1L390 1219 aa15.11■□□□□ 0.01
COL4A2-203ENST00000462309 SLAIN1Q8ND83 568 aa15.11■□□□□ 0.01
COL4A2-203ENST00000462309 DDRGK1Q96HY6 314 aa15.11■□□□□ 0.01
COL4A2-203ENST00000462309 MAP3K7O43318 606 aa15.09■□□□□ 0.01
COL4A2-203ENST00000462309 TYW1BQ6NUM6 668 aa15.09■□□□□ 0.01
COL4A2-203ENST00000462309 RBM33Q96EV2 1170 aaKnown RBP15.06■□□□□ 0
COL4A2-203ENST00000462309 TSR1Q2NL82 804 aaKnown RBP15.05■□□□□ -0
COL4A2-203ENST00000462309 FBXW7Q969H0 707 aa15.05■□□□□ -0
COL4A2-203ENST00000462309 JPH4Q96JJ6 628 aa15.05■□□□□ -0
COL4A2-203ENST00000462309 TTLL12Q14166 644 aaPredicted RBP15.03■□□□□ -0
COL4A2-203ENST00000462309 FOSBP53539 338 aa15.02■□□□□ -0
COL4A2-203ENST00000462309 TMUB1Q9BVT8 246 aa15.02■□□□□ -0
COL4A2-203ENST00000462309 REPIN1Q9BWE0 567 aaKnown RBP15.02■□□□□ -0
COL4A2-203ENST00000462309 GIGYF2Q6Y7W6 1299 aaKnown RBP15□□□□□ -0.01
COL4A2-203ENST00000462309 GOPCQ9HD26 462 aa14.99□□□□□ -0.01
COL4A2-203ENST00000462309 MS4A1P11836 297 aa14.98□□□□□ -0.01
COL4A2-203ENST00000462309 PHOX2BQ99453 314 aa14.97□□□□□ -0.01
COL4A2-203ENST00000462309 C6orf132Q5T0Z8 1188 aa14.96□□□□□ -0.01
COL4A2-203ENST00000462309 CERKQ8TCT0 537 aa14.96□□□□□ -0.01
COL4A2-203ENST00000462309 HOXB3P14651 431 aaPredicted RBP14.95□□□□□ -0.02
COL4A2-203ENST00000462309 CLCN1P35523 988 aa14.94□□□□□ -0.02
COL4A2-203ENST00000462309 ZDHHC16Q969W1 377 aa14.94□□□□□ -0.02
COL4A2-203ENST00000462309 DOK7Q18PE1 504 aa14.93□□□□□ -0.02
COL4A2-203ENST00000462309 MMRN1Q13201 1228 aa14.92□□□□□ -0.02
COL4A2-203ENST00000462309 ARSIQ5FYB1 569 aa14.92□□□□□ -0.02
COL4A2-203ENST00000462309 GPCPD1Q9NPB8 672 aa14.92□□□□□ -0.02
COL4A2-203ENST00000462309 NUDT7P0C024 238 aa14.91□□□□□ -0.02
COL4A2-203ENST00000462309 GPR153Q6NV75 609 aa14.91□□□□□ -0.02
COL4A2-203ENST00000462309 ZNF454Q8N9F8 522 aa14.91□□□□□ -0.02
COL4A2-203ENST00000462309 TTC13Q8NBP0 860 aa14.91□□□□□ -0.02
COL4A2-203ENST00000462309 KHSRPQ92945 711 aaKnown RBP eCLIP14.91□□□□□ -0.02
COL4A2-203ENST00000462309 ARXQ96QS3 562 aa14.91□□□□□ -0.02
COL4A2-203ENST00000462309 ZSWIM6Q9HCJ5 1215 aa14.91□□□□□ -0.02
COL4A2-203ENST00000462309 OATP04181 439 aa14.9□□□□□ -0.02
COL4A2-203ENST00000462309 MDM2Q00987 491 aaPredicted RBP14.9□□□□□ -0.02
COL4A2-203ENST00000462309 RBM27Q9P2N5 1060 aaKnown RBP14.89□□□□□ -0.03
COL4A2-203ENST00000462309 PADI6Q6TGC4 694 aa14.88□□□□□ -0.03
COL4A2-203ENST00000462309 METTL3Q86U44 580 aaKnown RBP14.88□□□□□ -0.03
COL4A2-203ENST00000462309 ADAM33Q9BZ11 813 aa14.88□□□□□ -0.03
COL4A2-203ENST00000462309 SUPT5HO00267 1087 aaKnown RBP14.87□□□□□ -0.03
COL4A2-203ENST00000462309 FAM161AQ3B820 660 aa14.87□□□□□ -0.03
COL4A2-203ENST00000462309 ZMYND15Q9H091 742 aa14.87□□□□□ -0.03
COL4A2-203ENST00000462309 ADGRG1Q9Y653 693 aa14.87□□□□□ -0.03
COL4A2-203ENST00000462309 SSTR3P32745 418 aaPredicted RBP14.86□□□□□ -0.03
COL4A2-203ENST00000462309 PXYLP1Q8TE99 480 aa14.86□□□□□ -0.03
COL4A2-203ENST00000462309 RIMBP2O15034 1052 aa14.85□□□□□ -0.03
COL4A2-203ENST00000462309 SPNS2Q8IVW8 549 aa14.83□□□□□ -0.04
COL4A2-203ENST00000462309 PRSS12P56730 875 aa14.82□□□□□ -0.04
COL4A2-203ENST00000462309 SH3D19Q5HYK7 790 aa14.82□□□□□ -0.04
COL4A2-203ENST00000462309 FAM217BQ9NTX9 383 aaPredicted RBP14.82□□□□□ -0.04
COL4A2-203ENST00000462309 PCMTD1Q96MG8 357 aaPredicted RBP14.81□□□□□ -0.04
COL4A2-203ENST00000462309 ST18O60284 1047 aa14.79□□□□□ -0.04
COL4A2-203ENST00000462309 LHX6Q9UPM6 363 aa14.79□□□□□ -0.04
COL4A2-203ENST00000462309 NLRP7Q8WX94 980 aa14.78□□□□□ -0.04
COL4A2-203ENST00000462309 CDCA7LQ96GN5 454 aa14.78□□□□□ -0.04
COL4A2-203ENST00000462309 FLIIQ13045 1269 aa14.77□□□□□ -0.05
COL4A2-203ENST00000462309 BEGAINQ9BUH8 593 aa14.77□□□□□ -0.05
COL4A2-203ENST00000462309 RSPH6AQ9H0K4 717 aa14.77□□□□□ -0.05
COL4A2-203ENST00000462309 ONECUT3O60422 494 aaPredicted RBP14.76□□□□□ -0.05
COL4A2-203ENST00000462309 SKIV2LQ15477 1246 aaKnown RBP14.76□□□□□ -0.05
COL4A2-203ENST00000462309 ZNF710Q8N1W2 664 aa14.76□□□□□ -0.05
COL4A2-203ENST00000462309 RBM46Q8TBY0 533 aaKnown RBP14.74□□□□□ -0.05
COL4A2-203ENST00000462309 BCL2L12Q9HB09 334 aa14.74□□□□□ -0.05
COL4A2-203ENST00000462309 FAM198AQ9UFP1 575 aa14.74□□□□□ -0.05
COL4A2-203ENST00000462309 PSDA5PKW4 1024 aaPredicted RBP14.73□□□□□ -0.05
COL4A2-203ENST00000462309 COL9A1P20849 921 aa14.73□□□□□ -0.05
COL4A2-203ENST00000462309 PPP4R3BQ5MIZ7 849 aa14.73□□□□□ -0.05
COL4A2-203ENST00000462309 EYA1Q99502 592 aa14.7□□□□□ -0.06
COL4A2-203ENST00000462309 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.68□□□□□ -0.06
COL4A2-203ENST00000462309 PPP1R3GB7ZBB8 358 aa14.67□□□□□ -0.06
COL4A2-203ENST00000462309 HOMEZQ8IX15 550 aa14.67□□□□□ -0.06
COL4A2-203ENST00000462309 PROCA1Q8NCQ7 364 aaPredicted RBP14.67□□□□□ -0.06
COL4A2-203ENST00000462309 TSKSQ9UJT2 592 aa14.67□□□□□ -0.06
COL4A2-203ENST00000462309 HOXB1P14653 301 aaPredicted RBP14.66□□□□□ -0.06
COL4A2-203ENST00000462309 RCCD1A6NED2 376 aa14.65□□□□□ -0.06
COL4A2-203ENST00000462309 PTPREP23469 700 aa14.65□□□□□ -0.06
COL4A2-203ENST00000462309 MYSM1Q5VVJ2 828 aa14.65□□□□□ -0.06
COL4A2-203ENST00000462309 SNPHO15079 494 aa14.64□□□□□ -0.07
COL4A2-203ENST00000462309 POLR3EQ9NVU0 708 aa14.64□□□□□ -0.07
COL4A2-203ENST00000462309 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.63□□□□□ -0.07
COL4A2-203ENST00000462309 C3orf80F5H4A9 247 aa14.62□□□□□ -0.07
COL4A2-203ENST00000462309 TBC1D2Q9BYX2 928 aa14.62□□□□□ -0.07
COL4A2-203ENST00000462309 DIXDC1Q155Q3 683 aa14.61□□□□□ -0.07
COL4A2-203ENST00000462309 NUDT18Q6ZVK8 323 aa14.6□□□□□ -0.07
COL4A2-203ENST00000462309 TRIM6-TRIM34B2RNG4 842 aa14.59□□□□□ -0.07
COL4A2-203ENST00000462309 TATDN2Q93075 761 aa14.58□□□□□ -0.08
COL4A2-203ENST00000462309 A6NJR5 290 aa14.57□□□□□ -0.08
COL4A2-203ENST00000462309 CD46P15529 392 aa14.57□□□□□ -0.08
COL4A2-203ENST00000462309 CLK2P49760 499 aaKnown RBP14.57□□□□□ -0.08
COL4A2-203ENST00000462309 MCM6Q14566 821 aa14.57□□□□□ -0.08
COL4A2-203ENST00000462309 NBPF26B4DH59 902 aa14.56□□□□□ -0.08
COL4A2-203ENST00000462309 DNAJB2P25686 324 aa14.56□□□□□ -0.08
COL4A2-203ENST00000462309 PACS2Q86VP3 889 aa14.56□□□□□ -0.08
COL4A2-203ENST00000462309 PNMA3Q9UL41 463 aa14.56□□□□□ -0.08
COL4A2-203ENST00000462309 SPIRE2Q8WWL2 714 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms