RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 C3P01024 1663 aa9.96□□□□□ -0.81
SMARCC1-204ENST00000462198 MYT1LQ9UL68 1186 aa9.96□□□□□ -0.82
SMARCC1-204ENST00000462198 POTEB2H3BUK9 544 aa9.95□□□□□ -0.82
SMARCC1-204ENST00000462198 CAMSAP1Q5T5Y3 1602 aa9.95□□□□□ -0.82
SMARCC1-204ENST00000462198 RAPGEF6Q8TEU7 1601 aa9.95□□□□□ -0.82
SMARCC1-204ENST00000462198 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.94□□□□□ -0.82
SMARCC1-204ENST00000462198 PKD2Q13563 968 aa9.93□□□□□ -0.82
SMARCC1-204ENST00000462198 PCDH10Q9P2E7 1040 aa9.93□□□□□ -0.82
SMARCC1-204ENST00000462198 RGS17Q9UGC6 210 aaPredicted RBP9.93□□□□□ -0.82
SMARCC1-204ENST00000462198 ZRANB1Q9UGI0 708 aa9.93□□□□□ -0.82
SMARCC1-204ENST00000462198 GALR2O43603 387 aaPredicted RBP9.92□□□□□ -0.82
SMARCC1-204ENST00000462198 EFCAB2Q5VUJ9 269 aa9.92□□□□□ -0.82
SMARCC1-204ENST00000462198 AFAP1Q8N556 730 aa9.92□□□□□ -0.82
SMARCC1-204ENST00000462198 NUP153P49790 1475 aaKnown RBP9.91□□□□□ -0.82
SMARCC1-204ENST00000462198 PLCH2O75038 1416 aa9.9□□□□□ -0.82
SMARCC1-204ENST00000462198 RANGAP1P46060 587 aaPredicted RBP9.86□□□□□ -0.83
SMARCC1-204ENST00000462198 PELP1Q8IZL8 1130 aaKnown RBP9.86□□□□□ -0.83
SMARCC1-204ENST00000462198 ZMYM3Q14202 1370 aa9.86□□□□□ -0.83
SMARCC1-204ENST00000462198 SUPT6HQ7KZ85 1726 aaKnown RBP9.85□□□□□ -0.83
SMARCC1-204ENST00000462198 NPATQ14207 1427 aa9.85□□□□□ -0.83
SMARCC1-204ENST00000462198 CNTLNQ9NXG0 1405 aa9.85□□□□□ -0.83
SMARCC1-204ENST00000462198 POTEAQ6S8J7 498 aa9.85□□□□□ -0.83
SMARCC1-204ENST00000462198 ZNF518AQ6AHZ1 1483 aa9.85□□□□□ -0.83
SMARCC1-204ENST00000462198 PRXQ9BXM0 1461 aa9.85□□□□□ -0.83
SMARCC1-204ENST00000462198 PTPRKQ15262 1439 aa9.84□□□□□ -0.83
SMARCC1-204ENST00000462198 AGLP35573 1532 aa9.84□□□□□ -0.83
SMARCC1-204ENST00000462198 PLA2R1Q13018 1463 aa9.84□□□□□ -0.83
SMARCC1-204ENST00000462198 TCOF1Q13428 1488 aaKnown RBP9.84□□□□□ -0.83
SMARCC1-204ENST00000462198 SAMD9Q5K651 1589 aa9.84□□□□□ -0.83
SMARCC1-204ENST00000462198 DIP2CQ9Y2E4 1556 aa9.84□□□□□ -0.83
SMARCC1-204ENST00000462198 MYT1Q01538 1121 aa9.83□□□□□ -0.84
SMARCC1-204ENST00000462198 REREQ9P2R6 1566 aa9.83□□□□□ -0.84
SMARCC1-204ENST00000462198 CPS1P31327 1500 aa9.82□□□□□ -0.84
SMARCC1-204ENST00000462198 PLCB2Q00722 1185 aa9.82□□□□□ -0.84
SMARCC1-204ENST00000462198 CREBZFQ9NS37 354 aa9.82□□□□□ -0.84
SMARCC1-204ENST00000462198 SHANK2Q9UPX8 1470 aa9.82□□□□□ -0.84
SMARCC1-204ENST00000462198 KDM5CP41229 1560 aa9.8□□□□□ -0.84
SMARCC1-204ENST00000462198 MLH3Q9UHC1 1453 aa9.8□□□□□ -0.84
SMARCC1-204ENST00000462198 MYO5CQ9NQX4 1742 aa9.79□□□□□ -0.84
SMARCC1-204ENST00000462198 ABCA6Q8N139 1617 aa9.79□□□□□ -0.84
SMARCC1-204ENST00000462198 ALKQ9UM73 1620 aa9.79□□□□□ -0.84
SMARCC1-204ENST00000462198 MROH2AA6NES4 1674 aa9.78□□□□□ -0.84
SMARCC1-204ENST00000462198 ATP1B4Q9UN42 357 aaPredicted RBP9.78□□□□□ -0.84
SMARCC1-204ENST00000462198 CEP170BQ9Y4F5 1589 aaPredicted RBP9.78□□□□□ -0.84
SMARCC1-204ENST00000462198 ZNF142P52746 1687 aaPredicted RBP9.77□□□□□ -0.84
SMARCC1-204ENST00000462198 CDK13Q14004 1512 aaKnown RBP9.77□□□□□ -0.85
SMARCC1-204ENST00000462198 MYO3AQ8NEV4 1616 aa9.76□□□□□ -0.85
SMARCC1-204ENST00000462198 UPF1Q92900 1129 aaKnown RBP eCLIP9.76□□□□□ -0.85
SMARCC1-204ENST00000462198 CDK11AQ9UQ88 783 aaPredicted RBP9.76□□□□□ -0.85
SMARCC1-204ENST00000462198 ARHGAP5Q13017 1502 aa9.76□□□□□ -0.85
SMARCC1-204ENST00000462198 LCE2DQ5TA82 110 aaPredicted RBP9.75□□□□□ -0.85
SMARCC1-204ENST00000462198 ANKLE2Q86XL3 938 aa9.75□□□□□ -0.85
SMARCC1-204ENST00000462198 PHF12Q96QT6 1004 aa9.75□□□□□ -0.85
SMARCC1-204ENST00000462198 CLTCQ00610 1675 aaKnown RBP9.74□□□□□ -0.85
SMARCC1-204ENST00000462198 PAK3O75914 559 aaPredicted RBP9.74□□□□□ -0.85
SMARCC1-204ENST00000462198 GGT6Q6P531 493 aa9.74□□□□□ -0.85
SMARCC1-204ENST00000462198 DNMT1P26358 1616 aaKnown RBP9.74□□□□□ -0.85
SMARCC1-204ENST00000462198 KIDINS220Q9ULH0 1771 aa9.73□□□□□ -0.85
SMARCC1-204ENST00000462198 POTEJP0CG39 1038 aa9.73□□□□□ -0.85
SMARCC1-204ENST00000462198 SETD1AO15047 1707 aaKnown RBP9.73□□□□□ -0.85
SMARCC1-204ENST00000462198 A2ML1A8K2U0 1454 aa9.72□□□□□ -0.85
SMARCC1-204ENST00000462198 VWDEQ8N2E2 1590 aa9.72□□□□□ -0.85
SMARCC1-204ENST00000462198 METRNQ9UJH8 293 aa9.72□□□□□ -0.85
SMARCC1-204ENST00000462198 POLR1AO95602 1720 aaPredicted RBP9.72□□□□□ -0.85
SMARCC1-204ENST00000462198 ASTLQ6HA08 431 aaPredicted RBP9.71□□□□□ -0.86
SMARCC1-204ENST00000462198 MAMSTRQ6ZN01 415 aa9.71□□□□□ -0.86
SMARCC1-204ENST00000462198 NEURL4Q96JN8 1562 aa9.71□□□□□ -0.86
SMARCC1-204ENST00000462198 KIF14Q15058 1648 aa9.71□□□□□ -0.86
SMARCC1-204ENST00000462198 CDC42BPBQ9Y5S2 1711 aa9.7□□□□□ -0.86
SMARCC1-204ENST00000462198 C7P10643 843 aa9.7□□□□□ -0.86
SMARCC1-204ENST00000462198 THEMISQ8N1K5 641 aaPredicted RBP9.7□□□□□ -0.86
SMARCC1-204ENST00000462198 STAG3Q9UJ98 1225 aa9.7□□□□□ -0.86
SMARCC1-204ENST00000462198 FBXO3Q9UK99 471 aa9.7□□□□□ -0.86
SMARCC1-204ENST00000462198 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.7□□□□□ -0.86
SMARCC1-204ENST00000462198 LRRC7Q96NW7 1537 aa9.7□□□□□ -0.86
SMARCC1-204ENST00000462198 FBXO31Q5XUX0 539 aaPredicted RBP9.69□□□□□ -0.86
SMARCC1-204ENST00000462198 SLC39A7Q92504 469 aa9.69□□□□□ -0.86
SMARCC1-204ENST00000462198 STRCP1A6NGW2 1772 aa9.68□□□□□ -0.86
SMARCC1-204ENST00000462198 SPAG9O60271 1321 aaKnown RBP9.68□□□□□ -0.86
SMARCC1-204ENST00000462198 NPHP4O75161 1426 aaPredicted RBP9.67□□□□□ -0.86
SMARCC1-204ENST00000462198 ITSN2Q9NZM3 1697 aa9.67□□□□□ -0.86
SMARCC1-204ENST00000462198 TROQ12816 1431 aaPredicted RBP9.66□□□□□ -0.86
SMARCC1-204ENST00000462198 HNRNPMP52272 730 aaKnown RBP eCLIP9.66□□□□□ -0.86
SMARCC1-204ENST00000462198 TRIM52Q96A61 297 aa9.66□□□□□ -0.86
SMARCC1-204ENST00000462198 ZNF777Q9ULD5 760 aaPredicted RBP9.66□□□□□ -0.86
SMARCC1-204ENST00000462198 MED14O60244 1454 aa9.66□□□□□ -0.86
SMARCC1-204ENST00000462198 EEA1Q15075 1411 aa9.65□□□□□ -0.86
SMARCC1-204ENST00000462198 RNF17Q9BXT8 1623 aaKnown RBP9.65□□□□□ -0.86
SMARCC1-204ENST00000462198 SRCAPQ6ZRS2 3230 aa9.65□□□□□ -0.86
SMARCC1-204ENST00000462198 ATMINO43313 823 aaPredicted RBP9.65□□□□□ -0.86
SMARCC1-204ENST00000462198 ABCC1P33527 1531 aa9.65□□□□□ -0.86
SMARCC1-204ENST00000462198 CLIP1P30622 1438 aa9.65□□□□□ -0.87
SMARCC1-204ENST00000462198 FAM135BQ49AJ0 1406 aa9.65□□□□□ -0.87
SMARCC1-204ENST00000462198 TNRQ92752 1358 aa9.64□□□□□ -0.87
SMARCC1-204ENST00000462198 PROM2Q8N271 834 aa9.64□□□□□ -0.87
SMARCC1-204ENST00000462198 SAMD9LQ8IVG5 1584 aa9.63□□□□□ -0.87
SMARCC1-204ENST00000462198 A2MP01023 1474 aa9.63□□□□□ -0.87
SMARCC1-204ENST00000462198 BCANQ96GW7 911 aa9.62□□□□□ -0.87
SMARCC1-204ENST00000462198 MS4A3Q96HJ5 214 aa9.62□□□□□ -0.87
SMARCC1-204ENST00000462198 DEPDC5O75140 1603 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms