RNA–Protein interactions for RNA: ENST00000461195.5

TRAF4-207, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-207ENST00000461195 EIF2AK4Q9P2K8 1649 aaKnown RBP34.73■■■■□ 3.15
TRAF4-207ENST00000461195 UHRF1BP1Q6BDS2 1440 aa34.72■■■■□ 3.15
TRAF4-207ENST00000461195 FAM135AQ9P2D6 1515 aa34.71■■■■□ 3.15
TRAF4-207ENST00000461195 KIF15Q9NS87 1388 aa34.7■■■■□ 3.15
TRAF4-207ENST00000461195 NPATQ14207 1427 aa34.7■■■■□ 3.15
TRAF4-207ENST00000461195 RNF17Q9BXT8 1623 aaKnown RBP34.69■■■■□ 3.14
TRAF4-207ENST00000461195 PPARGC1BQ86YN6 1023 aaKnown RBP34.68■■■■□ 3.14
TRAF4-207ENST00000461195 KDM5DQ9BY66 1539 aa34.68■■■■□ 3.14
TRAF4-207ENST00000461195 RRP7BPQ9NSQ0 103 aa34.67■■■■□ 3.14
TRAF4-207ENST00000461195 ANKRD30AQ9BXX3 1397 aa34.64■■■■□ 3.14
TRAF4-207ENST00000461195 WASHC2CQ9Y4E1 1318 aa34.64■■■■□ 3.14
TRAF4-207ENST00000461195 CERKQ8TCT0 537 aa34.64■■■■□ 3.14
TRAF4-207ENST00000461195 CHIC2Q9UKJ5 165 aa34.64■■■■□ 3.14
TRAF4-207ENST00000461195 PTPRKQ15262 1439 aa34.63■■■■□ 3.13
TRAF4-207ENST00000461195 ERBINQ96RT1 1412 aa34.62■■■■□ 3.13
TRAF4-207ENST00000461195 NCOA1Q15788 1441 aa34.58■■■■□ 3.13
TRAF4-207ENST00000461195 ADGRL2O95490 1459 aa34.58■■■■□ 3.13
TRAF4-207ENST00000461195 MROH1Q8NDA8 1641 aa34.57■■■■□ 3.12
TRAF4-207ENST00000461195 ZC3H13Q5T200 1668 aaKnown RBP34.57■■■■□ 3.12
TRAF4-207ENST00000461195 PZPP20742 1482 aa34.53■■■■□ 3.12
TRAF4-207ENST00000461195 ABCC3O15438 1527 aa34.53■■■■□ 3.12
TRAF4-207ENST00000461195 MYO3AQ8NEV4 1616 aa34.52■■■■□ 3.12
TRAF4-207ENST00000461195 STRCQ7RTU9 1775 aa34.49■■■■□ 3.11
TRAF4-207ENST00000461195 PRDM15P57071 1507 aaPredicted RBP34.49■■■■□ 3.11
TRAF4-207ENST00000461195 DMRT2Q9Y5R5 561 aa34.48■■■■□ 3.11
TRAF4-207ENST00000461195 DEPDC5O75140 1603 aa34.48■■■■□ 3.11
TRAF4-207ENST00000461195 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.48■■■■□ 3.111e-7■■□□□ 12.7
TRAF4-207ENST00000461195 ZNF142P52746 1687 aaPredicted RBP34.47■■■■□ 3.11
TRAF4-207ENST00000461195 CEP152O94986 1710 aa34.47■■■■□ 3.11
TRAF4-207ENST00000461195 FBXO31Q5XUX0 539 aaPredicted RBP34.46■■■■□ 3.11
TRAF4-207ENST00000461195 CEP170BQ9Y4F5 1589 aaPredicted RBP34.44■■■■□ 3.1
TRAF4-207ENST00000461195 TNRQ92752 1358 aa34.43■■■■□ 3.1
TRAF4-207ENST00000461195 CAMSAP1Q5T5Y3 1602 aa34.42■■■■□ 3.1
TRAF4-207ENST00000461195 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.41■■■■□ 3.19e-7■■■□□ 14.9
TRAF4-207ENST00000461195 KANK1Q14678 1352 aa34.39■■■■□ 3.1
TRAF4-207ENST00000461195 ANKRD50Q9ULJ7 1429 aa34.38■■■■□ 3.09
TRAF4-207ENST00000461195 ROCK1Q13464 1354 aa34.38■■■■□ 3.09
TRAF4-207ENST00000461195 A2ML1A8K2U0 1454 aa34.37■■■■□ 3.09
TRAF4-207ENST00000461195 RRBP1Q9P2E9 1410 aaKnown RBP34.37■■■■□ 3.09
TRAF4-207ENST00000461195 ITGAEP38570 1179 aa34.36■■■■□ 3.09
TRAF4-207ENST00000461195 SPATA31D1Q6ZQQ2 1576 aa34.33■■■■□ 3.09
TRAF4-207ENST00000461195 VWDEQ8N2E2 1590 aa34.32■■■■□ 3.09
TRAF4-207ENST00000461195 ERVK-7P63135 1459 aa34.32■■■■□ 3.08
TRAF4-207ENST00000461195 ARHGAP31Q2M1Z3 1444 aa34.31■■■■□ 3.08
TRAF4-207ENST00000461195 CFAP65Q6ZU64 1925 aaKnown RBP34.31■■■■□ 3.08
TRAF4-207ENST00000461195 NLRP1Q9C000 1473 aa34.31■■■■□ 3.08
TRAF4-207ENST00000461195 PTPRTO14522 1441 aa34.3■■■■□ 3.08
TRAF4-207ENST00000461195 LMTK2Q8IWU2 1503 aa34.29■■■■□ 3.08
TRAF4-207ENST00000461195 PLA2R1Q13018 1463 aa34.28■■■■□ 3.08
TRAF4-207ENST00000461195 NCKAP5LQ9HCH0 1330 aa34.21■■■■□ 3.07
TRAF4-207ENST00000461195 UNC13BO14795 1591 aa34.2■■■■□ 3.07
TRAF4-207ENST00000461195 UGGT1Q9NYU2 1555 aa34.2■■■■□ 3.07
TRAF4-207ENST00000461195 PKD2Q13563 968 aa34.2■■■■□ 3.07
TRAF4-207ENST00000461195 EFCAB6Q5THR3 1501 aa34.19■■■■□ 3.06
TRAF4-207ENST00000461195 THEMISQ8N1K5 641 aaPredicted RBP34.17■■■■□ 3.06
TRAF4-207ENST00000461195 TET3O43151 1660 aa34.12■■■■□ 3.05
TRAF4-207ENST00000461195 LTBP4Q8N2S1 1624 aa34.12■■■■□ 3.05
TRAF4-207ENST00000461195 POLR1AO95602 1720 aaPredicted RBP34.12■■■■□ 3.05
TRAF4-207ENST00000461195 GCC2Q8IWJ2 1684 aa34.09■■■■□ 3.05
TRAF4-207ENST00000461195 RPRD2Q5VT52 1461 aaKnown RBP34.08■■■■□ 3.05
TRAF4-207ENST00000461195 UBR1Q8IWV7 1749 aa34.08■■■■□ 3.05
TRAF4-207ENST00000461195 IQGAP3Q86VI3 1631 aa34.07■■■■□ 3.04
TRAF4-207ENST00000461195 ANKLE2Q86XL3 938 aa34.06■■■■□ 3.04
TRAF4-207ENST00000461195 DISP3Q9P2K9 1392 aa34.06■■■■□ 3.04
TRAF4-207ENST00000461195 NOS1P29475 1434 aa34.05■■■■□ 3.04
TRAF4-207ENST00000461195 SYNMO15061 1565 aa34.04■■■■□ 3.04
TRAF4-207ENST00000461195 NEURL4Q96JN8 1562 aa34.03■■■■□ 3.04
TRAF4-207ENST00000461195 NUP155O75694 1391 aa34.03■■■■□ 3.04
TRAF4-207ENST00000461195 PIK3C2BO00750 1634 aa34.02■■■■□ 3.04
TRAF4-207ENST00000461195 NAIPQ13075 1403 aa34.02■■■■□ 3.04
TRAF4-207ENST00000461195 IQSEC2Q5JU85 1478 aa34■■■■□ 3.03
TRAF4-207ENST00000461195 E9PCH4 1651 aa33.98■■■■□ 3.03
TRAF4-207ENST00000461195 KDM5AP29375 1690 aaKnown RBP33.97■■■■□ 3.03
TRAF4-207ENST00000461195 IDI1Q13907 227 aa33.97■■■■□ 3.03
TRAF4-207ENST00000461195 HFM1A2PYH4 1435 aa33.96■■■■□ 3.03
TRAF4-207ENST00000461195 ILDR2Q71H61 639 aa33.95■■■■□ 3.03
TRAF4-207ENST00000461195 SLC52A1Q9NWF4 448 aa33.95■■■■□ 3.03
TRAF4-207ENST00000461195 STAG3Q9UJ98 1225 aa33.95■■■■□ 3.03
TRAF4-207ENST00000461195 ZNF335Q9H4Z2 1342 aaPredicted RBP33.95■■■■□ 3.03
TRAF4-207ENST00000461195 MED14O60244 1454 aa33.95■■■■□ 3.02
TRAF4-207ENST00000461195 SLIT1O75093 1534 aa33.93■■■■□ 3.02
TRAF4-207ENST00000461195 NPHP4O75161 1426 aaPredicted RBP33.92■■■■□ 3.02
TRAF4-207ENST00000461195 ARHGAP23Q9P227 1491 aa33.92■■■■□ 3.02
TRAF4-207ENST00000461195 IQGAP1P46940 1657 aa33.9■■■■□ 3.02
TRAF4-207ENST00000461195 ADGRB3O60242 1522 aa33.89■■■■□ 3.02
TRAF4-207ENST00000461195 SCAF11Q99590 1463 aaKnown RBP33.88■■■■□ 3.01
TRAF4-207ENST00000461195 TMEM2Q9UHN6 1383 aa33.86■■■■□ 3.01
TRAF4-207ENST00000461195 TXNDC2Q86VQ3 553 aa33.85■■■■□ 3.01
TRAF4-207ENST00000461195 EID1Q9Y6B2 187 aa33.84■■■■□ 3.01
TRAF4-207ENST00000461195 LTKP29376 864 aa33.83■■■■□ 3.01
TRAF4-207ENST00000461195 UBAP1LF5GYI3 381 aa33.82■■■■□ 3
TRAF4-207ENST00000461195 MYO5BQ9ULV0 1848 aa33.78■■■■□ 3
TRAF4-207ENST00000461195 TRIM52Q96A61 297 aa33.77■■■■□ 3
TRAF4-207ENST00000461195 TMEM131LA2VDJ0 1609 aa33.77■■■■□ 3
TRAF4-207ENST00000461195 SPHKAPQ2M3C7 1700 aa33.76■■■■□ 3
TRAF4-207ENST00000461195 SOCS7O14512 581 aa33.76■■■□□ 2.99
TRAF4-207ENST00000461195 CPS1P31327 1500 aa33.71■■■□□ 2.99
TRAF4-207ENST00000461195 CHGAP10645 457 aaKnown RBP33.71■■■□□ 2.99
TRAF4-207ENST00000461195 ZFYVE9O95405 1425 aa33.66■■■□□ 2.98
TRAF4-207ENST00000461195 RIMS2Q9UQ26 1411 aa33.65■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms