RNA–Protein interactions for RNA: ENST00000461111.1

AGRN-203, Transcript of agrin, humanhuman

TSL 1 (best)

Gene AGRN, Length 3,385 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-203ENST00000461111 PLEKHD1A6NEE1 506 aa16.09■□□□□ 0.17
AGRN-203ENST00000461111 SEC24BO95487 1268 aa16.09■□□□□ 0.17
AGRN-203ENST00000461111 BECN1Q14457 450 aa16.09■□□□□ 0.17
AGRN-203ENST00000461111 KDM6BO15054 1643 aa16.08■□□□□ 0.16
AGRN-203ENST00000461111 XRCC6P12956 609 aaKnown RBP eCLIP16.07■□□□□ 0.16
AGRN-203ENST00000461111 CFAP43Q8NDM7 1665 aa16.07■□□□□ 0.16
AGRN-203ENST00000461111 SNAPC4Q5SXM2 1469 aa16.06■□□□□ 0.16
AGRN-203ENST00000461111 LRPPRCP42704 1394 aaKnown RBP16.06■□□□□ 0.16
AGRN-203ENST00000461111 EFCAB5A4FU69 1503 aa16.06■□□□□ 0.16
AGRN-203ENST00000461111 KDM2BQ8NHM5 1336 aa16.04■□□□□ 0.16
AGRN-203ENST00000461111 ADAMTS8Q9UP79 889 aa16.04■□□□□ 0.16
AGRN-203ENST00000461111 KNSTRNQ9Y448 316 aa16.04■□□□□ 0.16
AGRN-203ENST00000461111 RPRD2Q5VT52 1461 aaKnown RBP16.04■□□□□ 0.16
AGRN-203ENST00000461111 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.03■□□□□ 0.16
AGRN-203ENST00000461111 ABCA10Q8WWZ4 1543 aa16.02■□□□□ 0.16
AGRN-203ENST00000461111 DAPK1P53355 1430 aa16.02■□□□□ 0.15
AGRN-203ENST00000461111 PRG4Q92954 1404 aaPredicted RBP16.02■□□□□ 0.15
AGRN-203ENST00000461111 ABCC5O15440 1437 aa16.01■□□□□ 0.15
AGRN-203ENST00000461111 SUPT6HQ7KZ85 1726 aaKnown RBP16.01■□□□□ 0.15
AGRN-203ENST00000461111 ARID3AQ99856 593 aa16.01■□□□□ 0.15
AGRN-203ENST00000461111 MAGI3Q5TCQ9 1506 aa16■□□□□ 0.15
AGRN-203ENST00000461111 KIF21AQ7Z4S6 1674 aa16■□□□□ 0.15
AGRN-203ENST00000461111 RRP9O43818 475 aaKnown RBP16■□□□□ 0.15
AGRN-203ENST00000461111 EPRSP07814 1512 aaKnown RBP16■□□□□ 0.15
AGRN-203ENST00000461111 PLEKHG5O94827 1062 aa16■□□□□ 0.15
AGRN-203ENST00000461111 MIA2Q96PC5 1412 aa15.99■□□□□ 0.15
AGRN-203ENST00000461111 EHBP1L1Q8N3D4 1523 aa15.99■□□□□ 0.15
AGRN-203ENST00000461111 GRIN2BQ13224 1484 aa15.99■□□□□ 0.15
AGRN-203ENST00000461111 BCAR3O75815 825 aa15.99■□□□□ 0.15
AGRN-203ENST00000461111 IGHDP01880 384 aa15.99■□□□□ 0.15
AGRN-203ENST00000461111 TEX14Q8IWB6 1497 aa15.98■□□□□ 0.15
AGRN-203ENST00000461111 ANKRD30AQ9BXX3 1397 aa15.98■□□□□ 0.15
AGRN-203ENST00000461111 UPF2Q9HAU5 1272 aaKnown RBP15.98■□□□□ 0.15
AGRN-203ENST00000461111 TRIM44Q96DX7 344 aaPredicted RBP15.98■□□□□ 0.15
AGRN-203ENST00000461111 PODXL2Q9NZ53 605 aa15.98■□□□□ 0.15
AGRN-203ENST00000461111 MYH16Q9H6N6 1097 aa15.97■□□□□ 0.15
AGRN-203ENST00000461111 BCL2L13Q9BXK5 485 aa15.96■□□□□ 0.15
AGRN-203ENST00000461111 CLCN1P35523 988 aa15.96■□□□□ 0.15
AGRN-203ENST00000461111 CHGAP10645 457 aaKnown RBP15.96■□□□□ 0.15
AGRN-203ENST00000461111 TMF1P82094 1093 aa15.96■□□□□ 0.15
AGRN-203ENST00000461111 GOLGA2Q08379 1002 aa15.95■□□□□ 0.14
AGRN-203ENST00000461111 CLUAP1Q96AJ1 413 aa15.95■□□□□ 0.14
AGRN-203ENST00000461111 APAF1O14727 1248 aa15.95■□□□□ 0.14
AGRN-203ENST00000461111 RRP7AQ9Y3A4 280 aaKnown RBP15.95■□□□□ 0.14
AGRN-203ENST00000461111 DNMBPQ6XZF7 1577 aa15.95■□□□□ 0.14
AGRN-203ENST00000461111 THOC2Q8NI27 1593 aaKnown RBP15.94■□□□□ 0.14
AGRN-203ENST00000461111 COG6Q9Y2V7 657 aa15.94■□□□□ 0.14
AGRN-203ENST00000461111 UGGT2Q9NYU1 1516 aa15.94■□□□□ 0.14
AGRN-203ENST00000461111 ANKRD50Q9ULJ7 1429 aa15.94■□□□□ 0.14
AGRN-203ENST00000461111 USP19O94966 1318 aa15.93■□□□□ 0.14
AGRN-203ENST00000461111 A0A0U1RQG5 324 aaPredicted RBP15.93■□□□□ 0.14
AGRN-203ENST00000461111 TRAK2O60296 914 aa15.93■□□□□ 0.14
AGRN-203ENST00000461111 DUSP27Q5VZP5 1158 aa15.93■□□□□ 0.14
AGRN-203ENST00000461111 BCORL1Q5H9F3 1711 aa15.93■□□□□ 0.14
AGRN-203ENST00000461111 TBC1D2Q9BYX2 928 aa15.93■□□□□ 0.14
AGRN-203ENST00000461111 KIAA1107Q9UPP5 1409 aa15.93■□□□□ 0.14
AGRN-203ENST00000461111 MCM4P33991 863 aa15.92■□□□□ 0.14
AGRN-203ENST00000461111 RBM10P98175 930 aaKnown RBP15.92■□□□□ 0.14
AGRN-203ENST00000461111 PANK1Q8TE04 598 aa15.92■□□□□ 0.14
AGRN-203ENST00000461111 ESPNB1AK53 854 aa15.92■□□□□ 0.14
AGRN-203ENST00000461111 URB2Q14146 1524 aaKnown RBP15.91■□□□□ 0.14
AGRN-203ENST00000461111 MFAP1P55081 439 aaKnown RBP15.87■□□□□ 0.13
AGRN-203ENST00000461111 JPH4Q96JJ6 628 aa15.87■□□□□ 0.13
AGRN-203ENST00000461111 SPINK5Q9NQ38 1064 aaPredicted RBP15.87■□□□□ 0.13
AGRN-203ENST00000461111 ERBB4Q15303 1308 aa15.87■□□□□ 0.13
AGRN-203ENST00000461111 GRPEL1Q9HAV7 217 aa15.87■□□□□ 0.13
AGRN-203ENST00000461111 HECW1Q76N89 1606 aa15.87■□□□□ 0.13
AGRN-203ENST00000461111 PER1O15534 1290 aaPredicted RBP15.87■□□□□ 0.13
AGRN-203ENST00000461111 PLEKHH1Q9ULM0 1364 aa15.87■□□□□ 0.13
AGRN-203ENST00000461111 MRE11P49959 708 aa15.86■□□□□ 0.13
AGRN-203ENST00000461111 ANTXR1Q9H6X2 564 aa15.86■□□□□ 0.13
AGRN-203ENST00000461111 FOXD4L1Q9NU39 408 aa15.86■□□□□ 0.13
AGRN-203ENST00000461111 PARD3Q8TEW0 1356 aa15.84■□□□□ 0.13
AGRN-203ENST00000461111 FAM13BQ9NYF5 915 aa15.84■□□□□ 0.13
AGRN-203ENST00000461111 FSD2A1L4K1 749 aa15.83■□□□□ 0.13
AGRN-203ENST00000461111 KIAA1211Q6ZU35 1233 aa15.83■□□□□ 0.13
AGRN-203ENST00000461111 ROCK1Q13464 1354 aa15.83■□□□□ 0.12
AGRN-203ENST00000461111 CCDC144AA2RUR9 1427 aa15.83■□□□□ 0.12
AGRN-203ENST00000461111 ABCA5Q8WWZ7 1642 aa15.83■□□□□ 0.12
AGRN-203ENST00000461111 ZBTB7CA1YPR0 619 aa15.83■□□□□ 0.12
AGRN-203ENST00000461111 PPP2R1AP30153 589 aa15.83■□□□□ 0.12
AGRN-203ENST00000461111 DISP3Q9P2K9 1392 aa15.81■□□□□ 0.12
AGRN-203ENST00000461111 PZPP20742 1482 aa15.81■□□□□ 0.12
AGRN-203ENST00000461111 SLFN5Q08AF3 891 aa15.81■□□□□ 0.12
AGRN-203ENST00000461111 CHMP5Q9NZZ3 219 aa15.81■□□□□ 0.12
AGRN-203ENST00000461111 PLB1Q6P1J6 1458 aa15.81■□□□□ 0.12
AGRN-203ENST00000461111 MAPK8IP3Q9UPT6 1336 aa15.8■□□□□ 0.12
AGRN-203ENST00000461111 TCOF1Q13428 1488 aaKnown RBP15.8■□□□□ 0.12
AGRN-203ENST00000461111 CUL7Q14999 1698 aa15.8■□□□□ 0.12
AGRN-203ENST00000461111 CTTNBP2Q8WZ74 1663 aa15.79■□□□□ 0.12
AGRN-203ENST00000461111 TBC1D32Q96NH3 1257 aa15.79■□□□□ 0.12
AGRN-203ENST00000461111 PDZRN3Q9UPQ7 1066 aa15.79■□□□□ 0.12
AGRN-203ENST00000461111 TNNQ9UQP3 1299 aa15.78■□□□□ 0.12
AGRN-203ENST00000461111 DMRT2Q9Y5R5 561 aa15.78■□□□□ 0.12
AGRN-203ENST00000461111 SAFB2Q14151 953 aaKnown RBP eCLIP15.78■□□□□ 0.12
AGRN-203ENST00000461111 CAMSAP2Q08AD1 1489 aa15.77■□□□□ 0.12
AGRN-203ENST00000461111 GAS2L3Q86XJ1 694 aa15.77■□□□□ 0.12
AGRN-203ENST00000461111 HSCBQ8IWL3 235 aa15.76■□□□□ 0.11
AGRN-203ENST00000461111 C22orf23Q9BZE7 217 aa15.76■□□□□ 0.11
AGRN-203ENST00000461111 PDCL3Q9H2J4 239 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms