RNA–Protein interactions for RNA: ENST00000460992.1

PTPN18-206, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 398 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-206ENST00000460992 PRDM15P57071 1507 aaPredicted RBP11.58□□□□□ -0.56
PTPN18-206ENST00000460992 GCC2Q8IWJ2 1684 aa11.58□□□□□ -0.56
PTPN18-206ENST00000460992 KIF15Q9NS87 1388 aa11.57□□□□□ -0.56
PTPN18-206ENST00000460992 KDM5DQ9BY66 1539 aa11.57□□□□□ -0.56
PTPN18-206ENST00000460992 FAM50AQ14320 339 aaKnown RBP11.56□□□□□ -0.56
PTPN18-206ENST00000460992 PTPRKQ15262 1439 aa11.56□□□□□ -0.56
PTPN18-206ENST00000460992 CCER1Q8TC90 406 aaPredicted RBP11.56□□□□□ -0.56
PTPN18-206ENST00000460992 ERBINQ96RT1 1412 aa11.56□□□□□ -0.56
PTPN18-206ENST00000460992 FAM135AQ9P2D6 1515 aa11.55□□□□□ -0.56
PTPN18-206ENST00000460992 CAMSAP1Q5T5Y3 1602 aa11.55□□□□□ -0.56
PTPN18-206ENST00000460992 PREX1Q8TCU6 1659 aa11.55□□□□□ -0.56
PTPN18-206ENST00000460992 MYO3AQ8NEV4 1616 aa11.54□□□□□ -0.56
PTPN18-206ENST00000460992 PPP6R1Q9UPN7 881 aa11.54□□□□□ -0.56
PTPN18-206ENST00000460992 ABCC3O15438 1527 aa11.54□□□□□ -0.56
PTPN18-206ENST00000460992 UNC13BO14795 1591 aa11.54□□□□□ -0.56
PTPN18-206ENST00000460992 DHX29Q7Z478 1369 aaKnown RBP11.54□□□□□ -0.56
PTPN18-206ENST00000460992 RSPH4AQ5TD94 716 aa11.53□□□□□ -0.56
PTPN18-206ENST00000460992 TSPY4P0CV99 314 aa11.52□□□□□ -0.57
PTPN18-206ENST00000460992 TSPY10P0CW01 314 aa11.52□□□□□ -0.57
PTPN18-206ENST00000460992 ANKRD30AQ9BXX3 1397 aa11.52□□□□□ -0.57
PTPN18-206ENST00000460992 CNTLNQ9NXG0 1405 aa11.52□□□□□ -0.57
PTPN18-206ENST00000460992 ZNF142P52746 1687 aaPredicted RBP11.51□□□□□ -0.57
PTPN18-206ENST00000460992 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.51□□□□□ -0.57
PTPN18-206ENST00000460992 NCOA1Q15788 1441 aa11.51□□□□□ -0.57
PTPN18-206ENST00000460992 LMTK3Q96Q04 1460 aa11.5□□□□□ -0.57
PTPN18-206ENST00000460992 CHIC2Q9UKJ5 165 aa11.49□□□□□ -0.57
PTPN18-206ENST00000460992 VWDEQ8N2E2 1590 aa11.49□□□□□ -0.57
PTPN18-206ENST00000460992 EFCAB6Q5THR3 1501 aa11.47□□□□□ -0.57
PTPN18-206ENST00000460992 PZPP20742 1482 aa11.47□□□□□ -0.57
PTPN18-206ENST00000460992 ANKRD50Q9ULJ7 1429 aa11.47□□□□□ -0.57
PTPN18-206ENST00000460992 ROCK1Q13464 1354 aa11.47□□□□□ -0.57
PTPN18-206ENST00000460992 KIF3BO15066 747 aa11.47□□□□□ -0.57
PTPN18-206ENST00000460992 TET3O43151 1660 aa11.46□□□□□ -0.57
PTPN18-206ENST00000460992 IQGAP3Q86VI3 1631 aa11.46□□□□□ -0.57
PTPN18-206ENST00000460992 ITGAEP38570 1179 aa11.46□□□□□ -0.57
PTPN18-206ENST00000460992 GGT6Q6P531 493 aa11.46□□□□□ -0.57
PTPN18-206ENST00000460992 RRP7BPQ9NSQ0 103 aa11.46□□□□□ -0.57
PTPN18-206ENST00000460992 CEP170BQ9Y4F5 1589 aaPredicted RBP11.45□□□□□ -0.58
PTPN18-206ENST00000460992 SPATA31D1Q6ZQQ2 1576 aa11.45□□□□□ -0.58
PTPN18-206ENST00000460992 CLSPNQ9HAW4 1339 aa11.44□□□□□ -0.58
PTPN18-206ENST00000460992 CENPBP07199 599 aaPredicted RBP11.44□□□□□ -0.58
PTPN18-206ENST00000460992 LMTK2Q8IWU2 1503 aa11.44□□□□□ -0.58
PTPN18-206ENST00000460992 CEBPAP49715 358 aaPredicted RBP11.43□□□□□ -0.58
PTPN18-206ENST00000460992 ERVK-7P63135 1459 aa11.43□□□□□ -0.58
PTPN18-206ENST00000460992 NPATQ14207 1427 aa11.43□□□□□ -0.58
PTPN18-206ENST00000460992 E9PCH4 1651 aa11.43□□□□□ -0.58
PTPN18-206ENST00000460992 ESF1Q9H501 851 aaKnown RBP11.42□□□□□ -0.58
PTPN18-206ENST00000460992 HFM1A2PYH4 1435 aa11.42□□□□□ -0.58
PTPN18-206ENST00000460992 UHRF1BP1Q6BDS2 1440 aa11.42□□□□□ -0.58
PTPN18-206ENST00000460992 ZMYM3Q14202 1370 aa11.41□□□□□ -0.58
PTPN18-206ENST00000460992 CFAP65Q6ZU64 1925 aaKnown RBP11.41□□□□□ -0.58
PTPN18-206ENST00000460992 NAIPQ13075 1403 aa11.41□□□□□ -0.58
PTPN18-206ENST00000460992 SYNMO15061 1565 aa11.41□□□□□ -0.58
PTPN18-206ENST00000460992 POLR1AO95602 1720 aaPredicted RBP11.39□□□□□ -0.59
PTPN18-206ENST00000460992 SETD1BQ9UPS6 1966 aaKnown RBP11.39□□□□□ -0.59
PTPN18-206ENST00000460992 SPHKAPQ2M3C7 1700 aa11.38□□□□□ -0.59
PTPN18-206ENST00000460992 DIEXFQ68CQ4 756 aaKnown RBP11.38□□□□□ -0.59
PTPN18-206ENST00000460992 UBR1Q8IWV7 1749 aa11.38□□□□□ -0.59
PTPN18-206ENST00000460992 WASHC2CQ9Y4E1 1318 aa11.37□□□□□ -0.59
PTPN18-206ENST00000460992 STRCQ7RTU9 1775 aa11.37□□□□□ -0.59
PTPN18-206ENST00000460992 PIK3C2BO00750 1634 aa11.37□□□□□ -0.59
PTPN18-206ENST00000460992 KANK1Q14678 1352 aa11.37□□□□□ -0.59
PTPN18-206ENST00000460992 ARHGAP31Q2M1Z3 1444 aa11.36□□□□□ -0.59
PTPN18-206ENST00000460992 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.36□□□□□ -0.59
PTPN18-206ENST00000460992 TNRQ92752 1358 aa11.36□□□□□ -0.59
PTPN18-206ENST00000460992 A2ML1A8K2U0 1454 aa11.36□□□□□ -0.59
PTPN18-206ENST00000460992 UGGT1Q9NYU2 1555 aa11.36□□□□□ -0.59
PTPN18-206ENST00000460992 MYO5BQ9ULV0 1848 aa11.35□□□□□ -0.59
PTPN18-206ENST00000460992 ZNF316A6NFI3 1004 aaPredicted RBP11.35□□□□□ -0.59
PTPN18-206ENST00000460992 RPRD2Q5VT52 1461 aaKnown RBP11.35□□□□□ -0.59
PTPN18-206ENST00000460992 ADGRB3O60242 1522 aa11.35□□□□□ -0.59
PTPN18-206ENST00000460992 NLRP1Q9C000 1473 aa11.34□□□□□ -0.59
PTPN18-206ENST00000460992 ACIN1Q9UKV3 1341 aaKnown RBP11.34□□□□□ -0.59
PTPN18-206ENST00000460992 HSPA2P54652 639 aa11.33□□□□□ -0.6
PTPN18-206ENST00000460992 KDM5AP29375 1690 aaKnown RBP11.33□□□□□ -0.6
PTPN18-206ENST00000460992 NEURL4Q96JN8 1562 aa11.33□□□□□ -0.6
PTPN18-206ENST00000460992 FBXO31Q5XUX0 539 aaPredicted RBP11.32□□□□□ -0.6
PTPN18-206ENST00000460992 NOS1P29475 1434 aa11.32□□□□□ -0.6
PTPN18-206ENST00000460992 PLA2R1Q13018 1463 aa11.32□□□□□ -0.6
PTPN18-206ENST00000460992 CLTCL1P53675 1640 aa11.31□□□□□ -0.6
PTPN18-206ENST00000460992 TRPM2O94759 1503 aa11.3□□□□□ -0.6
PTPN18-206ENST00000460992 NUP155O75694 1391 aa11.3□□□□□ -0.6
PTPN18-206ENST00000460992 PIAS4Q8N2W9 510 aaPredicted RBP11.29□□□□□ -0.6
PTPN18-206ENST00000460992 IQGAP1P46940 1657 aa11.28□□□□□ -0.6
PTPN18-206ENST00000460992 SCAF1Q9H7N4 1312 aaKnown RBP11.28□□□□□ -0.6
PTPN18-206ENST00000460992 TMEM131LA2VDJ0 1609 aa11.27□□□□□ -0.6
PTPN18-206ENST00000460992 RAB3GAP2Q9H2M9 1393 aa11.27□□□□□ -0.61
PTPN18-206ENST00000460992 SETD5Q9C0A6 1442 aa11.26□□□□□ -0.61
PTPN18-206ENST00000460992 SLIT1O75093 1534 aa11.25□□□□□ -0.61
PTPN18-206ENST00000460992 KIF1BO60333 1816 aa11.25□□□□□ -0.61
PTPN18-206ENST00000460992 ARHGAP23Q9P227 1491 aa11.24□□□□□ -0.61
PTPN18-206ENST00000460992 SCAF11Q99590 1463 aaKnown RBP11.23□□□□□ -0.61
PTPN18-206ENST00000460992 PTPRTO14522 1441 aa11.22□□□□□ -0.61
PTPN18-206ENST00000460992 TRIM52Q96A61 297 aa11.2□□□□□ -0.62
PTPN18-206ENST00000460992 IFT172Q9UG01 1749 aa11.2□□□□□ -0.62
PTPN18-206ENST00000460992 NEXMIFQ5QGS0 1516 aa11.19□□□□□ -0.62
PTPN18-206ENST00000460992 MED14O60244 1454 aa11.19□□□□□ -0.62
PTPN18-206ENST00000460992 NPHP4O75161 1426 aaPredicted RBP11.18□□□□□ -0.62
PTPN18-206ENST00000460992 ZFYVE9O95405 1425 aa11.18□□□□□ -0.62
PTPN18-206ENST00000460992 STRCP1A6NGW2 1772 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms