RNA–Protein interactions for RNA: ENST00000460791.1

NXF3-203, Transcript of nuclear RNA export factor 3, humanhuman

TSL 2

Gene NXF3, Length 592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3-203ENST00000460791 ESF1Q9H501 851 aaKnown RBP8.91□□□□□ -0.98
NXF3-203ENST00000460791 SETD1BQ9UPS6 1966 aaKnown RBP8.91□□□□□ -0.98
NXF3-203ENST00000460791 CLTCQ00610 1675 aaKnown RBP8.91□□□□□ -0.98
NXF3-203ENST00000460791 PLXNC1O60486 1568 aa8.9□□□□□ -0.98
NXF3-203ENST00000460791 AGLP35573 1532 aa8.9□□□□□ -0.98
NXF3-203ENST00000460791 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.9□□□□□ -0.98
NXF3-203ENST00000460791 DUOX2Q9NRD8 1548 aa8.9□□□□□ -0.99
NXF3-203ENST00000460791 CEP152O94986 1710 aa8.88□□□□□ -0.99
NXF3-203ENST00000460791 ADGRL2O95490 1459 aa8.88□□□□□ -0.99
NXF3-203ENST00000460791 PTPRMP28827 1452 aa8.88□□□□□ -0.99
NXF3-203ENST00000460791 C3P01024 1663 aa8.87□□□□□ -0.99
NXF3-203ENST00000460791 WASHC2CQ9Y4E1 1318 aa8.86□□□□□ -0.99
NXF3-203ENST00000460791 ANKRD50Q9ULJ7 1429 aa8.86□□□□□ -0.99
NXF3-203ENST00000460791 ROCK1Q13464 1354 aa8.86□□□□□ -0.99
NXF3-203ENST00000460791 RNF17Q9BXT8 1623 aaKnown RBP8.85□□□□□ -0.99
NXF3-203ENST00000460791 EIF2AK4Q9P2K8 1649 aaKnown RBP8.85□□□□□ -0.99
NXF3-203ENST00000460791 ZMYM3Q14202 1370 aa8.85□□□□□ -0.99
NXF3-203ENST00000460791 MROH1Q8NDA8 1641 aa8.84□□□□□ -0.99
NXF3-203ENST00000460791 FBXO31Q5XUX0 539 aaPredicted RBP8.84□□□□□ -0.99
NXF3-203ENST00000460791 TRIM52Q96A61 297 aa8.84□□□□□ -0.99
NXF3-203ENST00000460791 ERBINQ96RT1 1412 aa8.84□□□□□ -0.99
NXF3-203ENST00000460791 NAIPQ13075 1403 aa8.83□□□□□ -1
NXF3-203ENST00000460791 MROH2AA6NES4 1674 aa8.82□□□□□ -1
NXF3-203ENST00000460791 GCC2Q8IWJ2 1684 aa8.82□□□□□ -1
NXF3-203ENST00000460791 DEPDC5O75140 1603 aa8.82□□□□□ -1
NXF3-203ENST00000460791 KANK1Q14678 1352 aa8.82□□□□□ -1
NXF3-203ENST00000460791 CNTLNQ9NXG0 1405 aa8.81□□□□□ -1
NXF3-203ENST00000460791 ABCC3O15438 1527 aa8.81□□□□□ -1
NXF3-203ENST00000460791 NUP155O75694 1391 aa8.81□□□□□ -1
NXF3-203ENST00000460791 KDM5DQ9BY66 1539 aa8.8□□□□□ -1
NXF3-203ENST00000460791 CAMSAP1Q5T5Y3 1602 aa8.8□□□□□ -1
NXF3-203ENST00000460791 HSPA2P54652 639 aa8.8□□□□□ -1
NXF3-203ENST00000460791 UNC13BO14795 1591 aa8.79□□□□□ -1
NXF3-203ENST00000460791 PRDM15P57071 1507 aaPredicted RBP8.79□□□□□ -1
NXF3-203ENST00000460791 HFM1A2PYH4 1435 aa8.79□□□□□ -1
NXF3-203ENST00000460791 ZC3H13Q5T200 1668 aaKnown RBP8.78□□□□□ -1
NXF3-203ENST00000460791 SETD5Q9C0A6 1442 aa8.78□□□□□ -1
NXF3-203ENST00000460791 PREX1Q8TCU6 1659 aa8.78□□□□□ -1
NXF3-203ENST00000460791 VWDEQ8N2E2 1590 aa8.78□□□□□ -1
NXF3-203ENST00000460791 TRIM26Q12899 539 aaPredicted RBP8.77□□□□□ -1.01
NXF3-203ENST00000460791 MYO5BQ9ULV0 1848 aa8.77□□□□□ -1.01
NXF3-203ENST00000460791 PZPP20742 1482 aa8.77□□□□□ -1.01
NXF3-203ENST00000460791 IQGAP3Q86VI3 1631 aa8.76□□□□□ -1.01
NXF3-203ENST00000460791 TNRQ92752 1358 aa8.76□□□□□ -1.01
NXF3-203ENST00000460791 E9PCH4 1651 aa8.76□□□□□ -1.01
NXF3-203ENST00000460791 TET3O43151 1660 aa8.76□□□□□ -1.01
NXF3-203ENST00000460791 RAB3GAP2Q9H2M9 1393 aa8.75□□□□□ -1.01
NXF3-203ENST00000460791 NPATQ14207 1427 aa8.75□□□□□ -1.01
NXF3-203ENST00000460791 PKD2Q13563 968 aa8.75□□□□□ -1.01
NXF3-203ENST00000460791 SLC4A1APQ9BWU0 796 aaKnown RBP8.75□□□□□ -1.01
NXF3-203ENST00000460791 FAM135AQ9P2D6 1515 aa8.75□□□□□ -1.01
NXF3-203ENST00000460791 UHRF1BP1Q6BDS2 1440 aa8.74□□□□□ -1.01
NXF3-203ENST00000460791 MPHOSPH9Q99550 1183 aa8.74□□□□□ -1.01
NXF3-203ENST00000460791 ERVK-7P63135 1459 aa8.74□□□□□ -1.01
NXF3-203ENST00000460791 EFCAB6Q5THR3 1501 aa8.74□□□□□ -1.01
NXF3-203ENST00000460791 LMTK2Q8IWU2 1503 aa8.74□□□□□ -1.01
NXF3-203ENST00000460791 MYO3AQ8NEV4 1616 aa8.73□□□□□ -1.01
NXF3-203ENST00000460791 LMTK3Q96Q04 1460 aa8.73□□□□□ -1.01
NXF3-203ENST00000460791 CHGAP10645 457 aaKnown RBP8.73□□□□□ -1.01
NXF3-203ENST00000460791 ARHGAP31Q2M1Z3 1444 aa8.72□□□□□ -1.01
NXF3-203ENST00000460791 KCNA4P22459 653 aa8.72□□□□□ -1.01
NXF3-203ENST00000460791 IDI1Q13907 227 aa8.72□□□□□ -1.01
NXF3-203ENST00000460791 PCGF6Q9BYE7 350 aa8.72□□□□□ -1.01
NXF3-203ENST00000460791 SYNMO15061 1565 aa8.72□□□□□ -1.01
NXF3-203ENST00000460791 SPATA31D1Q6ZQQ2 1576 aa8.72□□□□□ -1.01
NXF3-203ENST00000460791 NCKAP5LQ9HCH0 1330 aa8.72□□□□□ -1.01
NXF3-203ENST00000460791 SPHKAPQ2M3C7 1700 aa8.71□□□□□ -1.01
NXF3-203ENST00000460791 STAG3Q9UJ98 1225 aa8.71□□□□□ -1.02
NXF3-203ENST00000460791 PIK3C2BO00750 1634 aa8.71□□□□□ -1.02
NXF3-203ENST00000460791 STRCQ7RTU9 1775 aa8.71□□□□□ -1.02
NXF3-203ENST00000460791 UGGT1Q9NYU2 1555 aa8.7□□□□□ -1.02
NXF3-203ENST00000460791 CEP170BQ9Y4F5 1589 aaPredicted RBP8.7□□□□□ -1.02
NXF3-203ENST00000460791 PPP4R3CPQ6ZMV5 832 aa8.7□□□□□ -1.02
NXF3-203ENST00000460791 NOS1P29475 1434 aa8.7□□□□□ -1.02
NXF3-203ENST00000460791 A2ML1A8K2U0 1454 aa8.7□□□□□ -1.02
NXF3-203ENST00000460791 ZNF142P52746 1687 aaPredicted RBP8.69□□□□□ -1.02
NXF3-203ENST00000460791 UBR1Q8IWV7 1749 aa8.69□□□□□ -1.02
NXF3-203ENST00000460791 KIF1BO60333 1816 aa8.69□□□□□ -1.02
NXF3-203ENST00000460791 NUTM2DQ5VT03 806 aaPredicted RBP8.68□□□□□ -1.02
NXF3-203ENST00000460791 THEMISQ8N1K5 641 aaPredicted RBP8.68□□□□□ -1.02
NXF3-203ENST00000460791 RPRD2Q5VT52 1461 aaKnown RBP8.68□□□□□ -1.02
NXF3-203ENST00000460791 NLRP1Q9C000 1473 aa8.68□□□□□ -1.02
NXF3-203ENST00000460791 HRCP23327 699 aa8.67□□□□□ -1.02
NXF3-203ENST00000460791 PLA2R1Q13018 1463 aa8.67□□□□□ -1.02
NXF3-203ENST00000460791 SLC52A1Q9NWF4 448 aa8.67□□□□□ -1.02
NXF3-203ENST00000460791 CLTCL1P53675 1640 aa8.66□□□□□ -1.02
NXF3-203ENST00000460791 TXNDC2Q86VQ3 553 aa8.66□□□□□ -1.02
NXF3-203ENST00000460791 TMEM131LA2VDJ0 1609 aa8.65□□□□□ -1.02
NXF3-203ENST00000460791 PTPRTO14522 1441 aa8.65□□□□□ -1.02
NXF3-203ENST00000460791 MSH5O43196 834 aa8.65□□□□□ -1.02
NXF3-203ENST00000460791 LTKP29376 864 aa8.65□□□□□ -1.02
NXF3-203ENST00000460791 ZNF326Q5BKZ1 582 aaKnown RBP8.65□□□□□ -1.02
NXF3-203ENST00000460791 ANKLE2Q86XL3 938 aa8.65□□□□□ -1.02
NXF3-203ENST00000460791 POLR1AO95602 1720 aaPredicted RBP8.65□□□□□ -1.03
NXF3-203ENST00000460791 RGL3Q3MIN7 710 aa8.64□□□□□ -1.03
NXF3-203ENST00000460791 NCBP3Q53F19 620 aaKnown RBP8.64□□□□□ -1.03
NXF3-203ENST00000460791 BCANQ96GW7 911 aa8.64□□□□□ -1.03
NXF3-203ENST00000460791 ADGRB3O60242 1522 aa8.64□□□□□ -1.03
NXF3-203ENST00000460791 ACIN1Q9UKV3 1341 aaKnown RBP8.63□□□□□ -1.03
NXF3-203ENST00000460791 TRPM2O94759 1503 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms