RNA–Protein interactions for RNA: ENST00000460509.1

VBP1-202, Transcript of VHL binding protein 1, humanhuman

TSL 2

Gene VBP1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-202ENST00000460509 SLC24A3Q9HC58 644 aa10.46□□□□□ -0.73
VBP1-202ENST00000460509 KDM4FA0A1W2PPD8 638 aa10.45□□□□□ -0.74
VBP1-202ENST00000460509 TYW1BQ6NUM6 668 aa10.45□□□□□ -0.74
VBP1-202ENST00000460509 JPH4Q96JJ6 628 aa10.44□□□□□ -0.74
VBP1-202ENST00000460509 EN1Q05925 392 aaPredicted RBP10.43□□□□□ -0.74
VBP1-202ENST00000460509 BARGINQ6ZT62 677 aa10.43□□□□□ -0.74
VBP1-202ENST00000460509 LHX6Q9UPM6 363 aa10.43□□□□□ -0.74
VBP1-202ENST00000460509 FCHSD2O94868 740 aa10.42□□□□□ -0.74
VBP1-202ENST00000460509 FOSBP53539 338 aa10.42□□□□□ -0.74
VBP1-202ENST00000460509 FBXW7Q969H0 707 aa10.42□□□□□ -0.74
VBP1-202ENST00000460509 ZDHHC16Q969W1 377 aa10.41□□□□□ -0.74
VBP1-202ENST00000460509 CDHR5Q9HBB8 845 aa10.41□□□□□ -0.74
VBP1-202ENST00000460509 TSR1Q2NL82 804 aaKnown RBP10.4□□□□□ -0.74
VBP1-202ENST00000460509 GPR37O15354 613 aa10.39□□□□□ -0.75
VBP1-202ENST00000460509 PPP4R3BQ5MIZ7 849 aa10.38□□□□□ -0.75
VBP1-202ENST00000460509 GNPATO15228 680 aa10.37□□□□□ -0.75
VBP1-202ENST00000460509 PTGDRQ13258 359 aa10.37□□□□□ -0.75
VBP1-202ENST00000460509 HIC1Q14526 733 aa10.37□□□□□ -0.75
VBP1-202ENST00000460509 ADAM33Q9BZ11 813 aa10.37□□□□□ -0.75
VBP1-202ENST00000460509 ZNF687Q8N1G0 1237 aa10.36□□□□□ -0.75
VBP1-202ENST00000460509 FECHP22830 423 aa10.35□□□□□ -0.75
VBP1-202ENST00000460509 C6orf132Q5T0Z8 1188 aa10.35□□□□□ -0.75
VBP1-202ENST00000460509 AK7Q96M32 723 aa10.35□□□□□ -0.75
VBP1-202ENST00000460509 PSDA5PKW4 1024 aaPredicted RBP10.34□□□□□ -0.75
VBP1-202ENST00000460509 NEUROD2Q15784 382 aa10.32□□□□□ -0.76
VBP1-202ENST00000460509 NPDC1Q9NQX5 325 aaPredicted RBP10.32□□□□□ -0.76
VBP1-202ENST00000460509 MINK1Q8N4C8 1332 aaPredicted RBP10.32□□□□□ -0.76
VBP1-202ENST00000460509 MAP2K5Q13163 448 aa10.31□□□□□ -0.76
VBP1-202ENST00000460509 IRF6O14896 467 aa10.29□□□□□ -0.76
VBP1-202ENST00000460509 PTPREP23469 700 aa10.29□□□□□ -0.76
VBP1-202ENST00000460509 CCDC102AQ96A19 550 aa10.29□□□□□ -0.76
VBP1-202ENST00000460509 CERKQ8TCT0 537 aa10.28□□□□□ -0.76
VBP1-202ENST00000460509 BCL2L12Q9HB09 334 aa10.28□□□□□ -0.76
VBP1-202ENST00000460509 TRIM66O15016 1216 aa10.27□□□□□ -0.77
VBP1-202ENST00000460509 BRPF1P55201 1214 aaPredicted RBP10.27□□□□□ -0.77
VBP1-202ENST00000460509 PADI6Q6TGC4 694 aa10.26□□□□□ -0.77
VBP1-202ENST00000460509 KCNK17Q96T54 332 aa10.26□□□□□ -0.77
VBP1-202ENST00000460509 COL9A1P20849 921 aa10.25□□□□□ -0.77
VBP1-202ENST00000460509 FAM161AQ3B820 660 aa10.25□□□□□ -0.77
VBP1-202ENST00000460509 ANKRD13DQ6ZTN6 518 aa10.25□□□□□ -0.77
VBP1-202ENST00000460509 KCNH8Q96L42 1107 aa10.25□□□□□ -0.77
VBP1-202ENST00000460509 PRSS12P56730 875 aa10.23□□□□□ -0.77
VBP1-202ENST00000460509 PDE4DQ08499 809 aa10.23□□□□□ -0.77
VBP1-202ENST00000460509 RNF166Q96A37 237 aaPredicted RBP10.23□□□□□ -0.77
VBP1-202ENST00000460509 CDCA7LQ96GN5 454 aa10.23□□□□□ -0.77
VBP1-202ENST00000460509 POTEEQ6S8J3 1075 aa10.22□□□□□ -0.77
VBP1-202ENST00000460509 GPBP1L1Q9HC44 474 aaPredicted RBP10.22□□□□□ -0.77
VBP1-202ENST00000460509 MYT1LQ9UL68 1186 aa10.22□□□□□ -0.77
VBP1-202ENST00000460509 AXIN2Q9Y2T1 843 aa10.22□□□□□ -0.77
VBP1-202ENST00000460509 PPP1R3GB7ZBB8 358 aa10.21□□□□□ -0.77
VBP1-202ENST00000460509 PSEN2P49810 448 aa10.21□□□□□ -0.77
VBP1-202ENST00000460509 LSM11P83369 360 aaKnown RBP eCLIP10.2□□□□□ -0.78
VBP1-202ENST00000460509 TTLL12Q14166 644 aaPredicted RBP10.2□□□□□ -0.78
VBP1-202ENST00000460509 OATP04181 439 aa10.17□□□□□ -0.78
VBP1-202ENST00000460509 PROX2Q3B8N5 592 aa10.17□□□□□ -0.78
VBP1-202ENST00000460509 RBM27Q9P2N5 1060 aaKnown RBP10.17□□□□□ -0.78
VBP1-202ENST00000460509 TSKSQ9UJT2 592 aa10.17□□□□□ -0.78
VBP1-202ENST00000460509 ARHGAP33O14559 1287 aa10.16□□□□□ -0.78
VBP1-202ENST00000460509 KDM4CQ9H3R0 1056 aa10.16□□□□□ -0.78
VBP1-202ENST00000460509 FAM198AQ9UFP1 575 aa10.16□□□□□ -0.78
VBP1-202ENST00000460509 ADGRG1Q9Y653 693 aa10.16□□□□□ -0.78
VBP1-202ENST00000460509 TRIM6-TRIM34B2RNG4 842 aa10.15□□□□□ -0.78
VBP1-202ENST00000460509 PBX2P40425 430 aa10.15□□□□□ -0.78
VBP1-202ENST00000460509 AMHR2Q16671 573 aa10.15□□□□□ -0.78
VBP1-202ENST00000460509 PACS2Q86VP3 889 aa10.15□□□□□ -0.78
VBP1-202ENST00000460509 RBM46Q8TBY0 533 aaKnown RBP10.15□□□□□ -0.78
VBP1-202ENST00000460509 NLRP7Q8WX94 980 aa10.15□□□□□ -0.78
VBP1-202ENST00000460509 MDM2Q00987 491 aaPredicted RBP10.14□□□□□ -0.79
VBP1-202ENST00000460509 METTL3Q86U44 580 aaKnown RBP10.14□□□□□ -0.79
VBP1-202ENST00000460509 TTC13Q8NBP0 860 aa10.14□□□□□ -0.79
VBP1-202ENST00000460509 PHOX2BQ99453 314 aa10.14□□□□□ -0.79
VBP1-202ENST00000460509 PNMA3Q9UL41 463 aa10.14□□□□□ -0.79
VBP1-202ENST00000460509 NUDT18Q6ZVK8 323 aa10.13□□□□□ -0.79
VBP1-202ENST00000460509 PARP9Q8IXQ6 854 aa10.13□□□□□ -0.79
VBP1-202ENST00000460509 NBPF26B4DH59 902 aa10.12□□□□□ -0.79
VBP1-202ENST00000460509 SMAPO00193 183 aa10.12□□□□□ -0.79
VBP1-202ENST00000460509 DMRTA1Q5VZB9 504 aa10.12□□□□□ -0.79
VBP1-202ENST00000460509 IL27Q8NEV9 243 aa10.12□□□□□ -0.79
VBP1-202ENST00000460509 PXYLP1Q8TE99 480 aa10.12□□□□□ -0.79
VBP1-202ENST00000460509 ZBED2Q9BTP6 218 aa10.12□□□□□ -0.79
VBP1-202ENST00000460509 TATDN2Q93075 761 aa10.11□□□□□ -0.79
VBP1-202ENST00000460509 KIAA1468Q9P260 1216 aa10.11□□□□□ -0.79
VBP1-202ENST00000460509 CLCN1P35523 988 aa10.1□□□□□ -0.79
VBP1-202ENST00000460509 TMEM132AQ24JP5 1023 aa10.1□□□□□ -0.79
VBP1-202ENST00000460509 GIGYF2Q6Y7W6 1299 aaKnown RBP10.1□□□□□ -0.79
VBP1-202ENST00000460509 C3orf80F5H4A9 247 aa10.09□□□□□ -0.79
VBP1-202ENST00000460509 REPIN1Q9BWE0 567 aaKnown RBP10.09□□□□□ -0.79
VBP1-202ENST00000460509 GPCPD1Q9NPB8 672 aa10.09□□□□□ -0.79
VBP1-202ENST00000460509 RCCD1A6NED2 376 aa10.08□□□□□ -0.8
VBP1-202ENST00000460509 EYA1Q99502 592 aa10.07□□□□□ -0.8
VBP1-202ENST00000460509 FAM117AQ9C073 453 aa10.07□□□□□ -0.8
VBP1-202ENST00000460509 ONECUT3O60422 494 aaPredicted RBP10.06□□□□□ -0.8
VBP1-202ENST00000460509 SEPT9Q9UHD8 586 aaPredicted RBP10.06□□□□□ -0.8
VBP1-202ENST00000460509 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.05□□□□□ -0.8
VBP1-202ENST00000460509 ADGRD1Q6QNK2 874 aa10.05□□□□□ -0.8
VBP1-202ENST00000460509 RABGEF1Q9UJ41 708 aa10.05□□□□□ -0.8
VBP1-202ENST00000460509 DNAJB2P25686 324 aa10.04□□□□□ -0.8
VBP1-202ENST00000460509 SSTR3P32745 418 aaPredicted RBP10.04□□□□□ -0.8
VBP1-202ENST00000460509 VPS9D1Q9Y2B5 631 aa10.04□□□□□ -0.8
VBP1-202ENST00000460509 MS4A1P11836 297 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms