RNA–Protein interactions for RNA: ENST00000460427.2

ACTR1B-203, Transcript of ARP1 actin related protein 1 homolog B, humanhuman

TSL 2

Gene ACTR1B, Length 730 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR1B-203ENST00000460427 FBXO41Q8TF61 875 aa31.93■■■□□ 2.7
ACTR1B-203ENST00000460427 EIF2AK4Q9P2K8 1649 aaKnown RBP31.91■■■□□ 2.7
ACTR1B-203ENST00000460427 CAMSAP1Q5T5Y3 1602 aa31.9■■■□□ 2.7
ACTR1B-203ENST00000460427 RNF17Q9BXT8 1623 aaKnown RBP31.9■■■□□ 2.7
ACTR1B-203ENST00000460427 CEP170BQ9Y4F5 1589 aaPredicted RBP31.89■■■□□ 2.7
ACTR1B-203ENST00000460427 NCOA1Q15788 1441 aa31.87■■■□□ 2.69
ACTR1B-203ENST00000460427 WASHC2CQ9Y4E1 1318 aa31.86■■■□□ 2.69
ACTR1B-203ENST00000460427 DNMT1P26358 1616 aaKnown RBP31.86■■■□□ 2.69
ACTR1B-203ENST00000460427 FGD6Q6ZV73 1430 aa31.85■■■□□ 2.69
ACTR1B-203ENST00000460427 ZC3H13Q5T200 1668 aaKnown RBP31.85■■■□□ 2.69
ACTR1B-203ENST00000460427 PTPRTO14522 1441 aa31.84■■■□□ 2.69
ACTR1B-203ENST00000460427 SHANK2Q9UPX8 1470 aa31.84■■■□□ 2.69
ACTR1B-203ENST00000460427 DUOX2Q9NRD8 1548 aa31.83■■■□□ 2.69
ACTR1B-203ENST00000460427 PZPP20742 1482 aa31.83■■■□□ 2.69
ACTR1B-203ENST00000460427 TCOF1Q13428 1488 aaKnown RBP31.82■■■□□ 2.68
ACTR1B-203ENST00000460427 ABCC5O15440 1437 aa31.82■■■□□ 2.68
ACTR1B-203ENST00000460427 CERKQ8TCT0 537 aa31.8■■■□□ 2.68
ACTR1B-203ENST00000460427 CFAP65Q6ZU64 1925 aaKnown RBP31.8■■■□□ 2.68
ACTR1B-203ENST00000460427 CEP152O94986 1710 aa31.79■■■□□ 2.68
ACTR1B-203ENST00000460427 DAPK1P53355 1430 aa31.78■■■□□ 2.68
ACTR1B-203ENST00000460427 MROH1Q8NDA8 1641 aa31.77■■■□□ 2.68
ACTR1B-203ENST00000460427 FBXO31Q5XUX0 539 aaPredicted RBP31.76■■■□□ 2.67
ACTR1B-203ENST00000460427 A2ML1A8K2U0 1454 aa31.76■■■□□ 2.67
ACTR1B-203ENST00000460427 PLA2R1Q13018 1463 aa31.76■■■□□ 2.67
ACTR1B-203ENST00000460427 ABCC3O15438 1527 aa31.75■■■□□ 2.67
ACTR1B-203ENST00000460427 TNRQ92752 1358 aa31.75■■■□□ 2.67
ACTR1B-203ENST00000460427 KIF15Q9NS87 1388 aa31.74■■■□□ 2.67
ACTR1B-203ENST00000460427 NCKAP5LQ9HCH0 1330 aa31.71■■■□□ 2.67
ACTR1B-203ENST00000460427 POLR1AO95602 1720 aaPredicted RBP31.7■■■□□ 2.67
ACTR1B-203ENST00000460427 RRP7BPQ9NSQ0 103 aa31.7■■■□□ 2.67
ACTR1B-203ENST00000460427 ERBINQ96RT1 1412 aa31.69■■■□□ 2.66
ACTR1B-203ENST00000460427 PKD2Q13563 968 aa31.67■■■□□ 2.66
ACTR1B-203ENST00000460427 DEPDC5O75140 1603 aa31.66■■■□□ 2.66
ACTR1B-203ENST00000460427 PRDM15P57071 1507 aaPredicted RBP31.65■■■□□ 2.66
ACTR1B-203ENST00000460427 NLRP1Q9C000 1473 aa31.64■■■□□ 2.66
ACTR1B-203ENST00000460427 LTBP4Q8N2S1 1624 aa31.64■■■□□ 2.65
ACTR1B-203ENST00000460427 CHIC2Q9UKJ5 165 aa31.63■■■□□ 2.65
ACTR1B-203ENST00000460427 ANKRD30AQ9BXX3 1397 aa31.63■■■□□ 2.65
ACTR1B-203ENST00000460427 SPATA31D1Q6ZQQ2 1576 aa31.63■■■□□ 2.65
ACTR1B-203ENST00000460427 FAM50AQ14320 339 aaKnown RBP31.6■■■□□ 2.65
ACTR1B-203ENST00000460427 UGGT1Q9NYU2 1555 aa31.59■■■□□ 2.65
ACTR1B-203ENST00000460427 ERVK-7P63135 1459 aa31.59■■■□□ 2.65
ACTR1B-203ENST00000460427 ADGRL2O95490 1459 aa31.56■■■□□ 2.64
ACTR1B-203ENST00000460427 NEURL4Q96JN8 1562 aa31.54■■■□□ 2.64
ACTR1B-203ENST00000460427 THEMISQ8N1K5 641 aaPredicted RBP31.53■■■□□ 2.64
ACTR1B-203ENST00000460427 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.53■■■□□ 2.641e-8■□□□□ 9.9
ACTR1B-203ENST00000460427 KANK1Q14678 1352 aa31.51■■■□□ 2.63
ACTR1B-203ENST00000460427 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.51■■■□□ 2.636e-10■□□□□ 10.5
ACTR1B-203ENST00000460427 ARHGAP31Q2M1Z3 1444 aa31.5■■■□□ 2.63
ACTR1B-203ENST00000460427 UBR1Q8IWV7 1749 aa31.5■■■□□ 2.63
ACTR1B-203ENST00000460427 ZNF335Q9H4Z2 1342 aaPredicted RBP31.49■■■□□ 2.63
ACTR1B-203ENST00000460427 IQSEC2Q5JU85 1478 aa31.49■■■□□ 2.63
ACTR1B-203ENST00000460427 ANKLE2Q86XL3 938 aa31.47■■■□□ 2.63
ACTR1B-203ENST00000460427 VWDEQ8N2E2 1590 aa31.47■■■□□ 2.63
ACTR1B-203ENST00000460427 LMTK2Q8IWU2 1503 aa31.44■■■□□ 2.62
ACTR1B-203ENST00000460427 IQGAP1P46940 1657 aa31.41■■■□□ 2.62
ACTR1B-203ENST00000460427 ANKRD50Q9ULJ7 1429 aa31.41■■■□□ 2.62
ACTR1B-203ENST00000460427 MED14O60244 1454 aa31.4■■■□□ 2.62
ACTR1B-203ENST00000460427 PIK3C2BO00750 1634 aa31.38■■■□□ 2.61
ACTR1B-203ENST00000460427 PPARGC1BQ86YN6 1023 aaKnown RBP31.37■■■□□ 2.61
ACTR1B-203ENST00000460427 EFCAB6Q5THR3 1501 aa31.37■■■□□ 2.61
ACTR1B-203ENST00000460427 NPHP4O75161 1426 aaPredicted RBP31.36■■■□□ 2.61
ACTR1B-203ENST00000460427 KDM5AP29375 1690 aaKnown RBP31.34■■■□□ 2.61
ACTR1B-203ENST00000460427 UNC13BO14795 1591 aa31.31■■■□□ 2.6
ACTR1B-203ENST00000460427 TET3O43151 1660 aa31.31■■■□□ 2.6
ACTR1B-203ENST00000460427 GCC2Q8IWJ2 1684 aa31.31■■■□□ 2.6
ACTR1B-203ENST00000460427 ROCK1Q13464 1354 aa31.3■■■□□ 2.6
ACTR1B-203ENST00000460427 SYNMO15061 1565 aa31.3■■■□□ 2.6
ACTR1B-203ENST00000460427 CPS1P31327 1500 aa31.3■■■□□ 2.6
ACTR1B-203ENST00000460427 SLIT1O75093 1534 aa31.29■■■□□ 2.6
ACTR1B-203ENST00000460427 ARHGAP23Q9P227 1491 aa31.27■■■□□ 2.6
ACTR1B-203ENST00000460427 SCAF11Q99590 1463 aaKnown RBP31.27■■■□□ 2.6
ACTR1B-203ENST00000460427 NOS1P29475 1434 aa31.25■■■□□ 2.59
ACTR1B-203ENST00000460427 RPRD2Q5VT52 1461 aaKnown RBP31.25■■■□□ 2.59
ACTR1B-203ENST00000460427 STRCP1A6NGW2 1772 aa31.25■■■□□ 2.59
ACTR1B-203ENST00000460427 ITGAEP38570 1179 aa31.24■■■□□ 2.59
ACTR1B-203ENST00000460427 STAG3Q9UJ98 1225 aa31.23■■■□□ 2.59
ACTR1B-203ENST00000460427 MYO5BQ9ULV0 1848 aa31.22■■■□□ 2.59
ACTR1B-203ENST00000460427 IDI1Q13907 227 aa31.21■■■□□ 2.59
ACTR1B-203ENST00000460427 UBAP1LF5GYI3 381 aa31.2■■■□□ 2.59
ACTR1B-203ENST00000460427 TXNDC2Q86VQ3 553 aa31.2■■■□□ 2.59
ACTR1B-203ENST00000460427 IQGAP3Q86VI3 1631 aa31.2■■■□□ 2.58
ACTR1B-203ENST00000460427 LTKP29376 864 aa31.19■■■□□ 2.58
ACTR1B-203ENST00000460427 E9PCH4 1651 aa31.19■■■□□ 2.58
ACTR1B-203ENST00000460427 EID1Q9Y6B2 187 aa31.18■■■□□ 2.58
ACTR1B-203ENST00000460427 ADGRB3O60242 1522 aa31.18■■■□□ 2.58
ACTR1B-203ENST00000460427 TMEM2Q9UHN6 1383 aa31.17■■■□□ 2.58
ACTR1B-203ENST00000460427 SLC52A1Q9NWF4 448 aa31.15■■■□□ 2.58
ACTR1B-203ENST00000460427 RRBP1Q9P2E9 1410 aaKnown RBP31.13■■■□□ 2.57
ACTR1B-203ENST00000460427 NUP155O75694 1391 aa31.06■■■□□ 2.56
ACTR1B-203ENST00000460427 TMEM131LA2VDJ0 1609 aa31.06■■■□□ 2.56
ACTR1B-203ENST00000460427 LRRC7Q96NW7 1537 aa31.05■■■□□ 2.56
ACTR1B-203ENST00000460427 TOM1O60784 492 aa31.05■■■□□ 2.56
ACTR1B-203ENST00000460427 XIRP1Q702N8 1843 aaKnown RBP31.04■■■□□ 2.56
ACTR1B-203ENST00000460427 SPHKAPQ2M3C7 1700 aa30.99■■■□□ 2.55
ACTR1B-203ENST00000460427 SCAF1Q9H7N4 1312 aaKnown RBP30.98■■■□□ 2.55
ACTR1B-203ENST00000460427 PIP4K2BP78356 416 aa30.98■■■□□ 2.55
ACTR1B-203ENST00000460427 ALKQ9UM73 1620 aa30.97■■■□□ 2.55
ACTR1B-203ENST00000460427 ZFYVE9O95405 1425 aa30.95■■■□□ 2.54
ACTR1B-203ENST00000460427 NAIPQ13075 1403 aa30.93■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms