RNA–Protein interactions for RNA: ENST00000460378.1

EPB41-208, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 1 (best)

Gene EPB41, Length 5,212 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-208ENST00000460378 GPRASP1Q5JY77 1395 aa13.58□□□□□ -0.24
EPB41-208ENST00000460378 MSH5O43196 834 aa13.58□□□□□ -0.24
EPB41-208ENST00000460378 CENPBP07199 599 aaPredicted RBP13.58□□□□□ -0.24
EPB41-208ENST00000460378 KLHL34Q8N239 644 aa13.56□□□□□ -0.24
EPB41-208ENST00000460378 ADAMTS2O95450 1211 aa13.56□□□□□ -0.24
EPB41-208ENST00000460378 PPP1R1BQ9UD71 204 aaPredicted RBP13.56□□□□□ -0.24
EPB41-208ENST00000460378 DHX29Q7Z478 1369 aaKnown RBP13.55□□□□□ -0.24
EPB41-208ENST00000460378 KDM5BQ9UGL1 1544 aa13.55□□□□□ -0.24
EPB41-208ENST00000460378 PPM1GO15355 546 aaPredicted RBP13.55□□□□□ -0.24
EPB41-208ENST00000460378 CCDC141Q6ZP82 1450 aa13.55□□□□□ -0.24
EPB41-208ENST00000460378 HMGB2P26583 209 aaKnown RBP13.54□□□□□ -0.24
EPB41-208ENST00000460378 NCOA2Q15596 1464 aa13.54□□□□□ -0.24
EPB41-208ENST00000460378 EHBP1L1Q8N3D4 1523 aa13.53□□□□□ -0.24
EPB41-208ENST00000460378 CFAP74Q9C0B2 1584 aa13.53□□□□□ -0.24
EPB41-208ENST00000460378 A2MP01023 1474 aa13.53□□□□□ -0.24
EPB41-208ENST00000460378 MAGI2Q86UL8 1455 aa13.53□□□□□ -0.24
EPB41-208ENST00000460378 PDE3BQ13370 1112 aa13.52□□□□□ -0.25
EPB41-208ENST00000460378 DISP1Q96F81 1524 aa13.52□□□□□ -0.25
EPB41-208ENST00000460378 CCDC144AA2RUR9 1427 aa13.51□□□□□ -0.25
EPB41-208ENST00000460378 MAPKBP1O60336 1514 aa13.51□□□□□ -0.25
EPB41-208ENST00000460378 DHX57Q6P158 1386 aaKnown RBP13.51□□□□□ -0.25
EPB41-208ENST00000460378 TRAPPC8Q9Y2L5 1435 aa13.51□□□□□ -0.25
EPB41-208ENST00000460378 LRPPRCP42704 1394 aaKnown RBP13.51□□□□□ -0.25
EPB41-208ENST00000460378 CARD11Q9BXL7 1154 aa13.51□□□□□ -0.25
EPB41-208ENST00000460378 ERCC6L2Q5T890 1561 aa13.51□□□□□ -0.25
EPB41-208ENST00000460378 ANKRD50Q9ULJ7 1429 aa13.5□□□□□ -0.25
EPB41-208ENST00000460378 MAGI3Q5TCQ9 1506 aa13.5□□□□□ -0.25
EPB41-208ENST00000460378 ZEB1P37275 1124 aaPredicted RBP13.5□□□□□ -0.25
EPB41-208ENST00000460378 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.49□□□□□ -0.25
EPB41-208ENST00000460378 KDM4FA0A1W2PPD8 638 aa13.49□□□□□ -0.25
EPB41-208ENST00000460378 TRAK1Q9UPV9 953 aa13.48□□□□□ -0.25
EPB41-208ENST00000460378 ILDR1Q86SU0 546 aaPredicted RBP13.48□□□□□ -0.25
EPB41-208ENST00000460378 C8orf37Q96NL8 207 aa13.47□□□□□ -0.25
EPB41-208ENST00000460378 NUP153P49790 1475 aaKnown RBP13.47□□□□□ -0.25
EPB41-208ENST00000460378 LRRC59Q96AG4 307 aaKnown RBP13.47□□□□□ -0.25
EPB41-208ENST00000460378 MPHOSPH9Q99550 1183 aa13.47□□□□□ -0.25
EPB41-208ENST00000460378 MIA2Q96PC5 1412 aa13.47□□□□□ -0.25
EPB41-208ENST00000460378 ZNF772Q68DY9 489 aaPredicted RBP13.47□□□□□ -0.25
EPB41-208ENST00000460378 AMOTL2Q9Y2J4 779 aa13.46□□□□□ -0.25
EPB41-208ENST00000460378 TMX4Q9H1E5 349 aaPredicted RBP13.46□□□□□ -0.25
EPB41-208ENST00000460378 TERF2IPQ9NYB0 399 aa13.46□□□□□ -0.25
EPB41-208ENST00000460378 EIF3AQ14152 1382 aaKnown RBP13.45□□□□□ -0.26
EPB41-208ENST00000460378 PRDM11Q9NQV5 511 aa13.45□□□□□ -0.26
EPB41-208ENST00000460378 MINK1Q8N4C8 1332 aaPredicted RBP13.45□□□□□ -0.26
EPB41-208ENST00000460378 STRN4Q9NRL3 753 aa13.44□□□□□ -0.26
EPB41-208ENST00000460378 C19orf44Q9H6X5 657 aa13.44□□□□□ -0.26
EPB41-208ENST00000460378 STAC3Q96MF2 364 aa13.44□□□□□ -0.26
EPB41-208ENST00000460378 YEATS2Q9ULM3 1422 aa13.43□□□□□ -0.26
EPB41-208ENST00000460378 AMPHP49418 695 aa13.43□□□□□ -0.26
EPB41-208ENST00000460378 RPGRIP1LQ68CZ1 1315 aa13.43□□□□□ -0.26
EPB41-208ENST00000460378 CTTNBP2Q8WZ74 1663 aa13.43□□□□□ -0.26
EPB41-208ENST00000460378 KIAA1107Q9UPP5 1409 aa13.42□□□□□ -0.26
EPB41-208ENST00000460378 RBM33Q96EV2 1170 aaKnown RBP13.42□□□□□ -0.26
EPB41-208ENST00000460378 USP35Q9P2H5 1018 aa13.42□□□□□ -0.26
EPB41-208ENST00000460378 IDI1Q13907 227 aa13.42□□□□□ -0.26
EPB41-208ENST00000460378 CFAP53Q96M91 514 aa13.41□□□□□ -0.26
EPB41-208ENST00000460378 KCNA6P17658 529 aa13.41□□□□□ -0.26
EPB41-208ENST00000460378 FGD6Q6ZV73 1430 aa13.41□□□□□ -0.26
EPB41-208ENST00000460378 NBPF8Q3BBV2 869 aa13.4□□□□□ -0.26
EPB41-208ENST00000460378 NBPF14Q5TI25 921 aa13.4□□□□□ -0.26
EPB41-208ENST00000460378 ERICH6Q7L0X2 663 aa13.39□□□□□ -0.27
EPB41-208ENST00000460378 LRRC9Q6ZRR7 1453 aa13.39□□□□□ -0.27
EPB41-208ENST00000460378 TMF1P82094 1093 aa13.39□□□□□ -0.27
EPB41-208ENST00000460378 EIF4G2P78344 907 aaKnown RBP eCLIP13.38□□□□□ -0.27
EPB41-208ENST00000460378 SYTL4Q96C24 671 aaPredicted RBP13.38□□□□□ -0.27
EPB41-208ENST00000460378 PTPRKQ15262 1439 aa13.38□□□□□ -0.27
EPB41-208ENST00000460378 ZCCHC11Q5TAX3 1644 aaKnown RBP13.38□□□□□ -0.27
EPB41-208ENST00000460378 RXRBP28702 533 aa13.38□□□□□ -0.27
EPB41-208ENST00000460378 HIRIP3Q9BW71 556 aaPredicted RBP13.37□□□□□ -0.27
EPB41-208ENST00000460378 ZNF335Q9H4Z2 1342 aaPredicted RBP13.37□□□□□ -0.27
EPB41-208ENST00000460378 NPHP3Q7Z494 1330 aa13.37□□□□□ -0.27
EPB41-208ENST00000460378 LTV1Q96GA3 475 aaPredicted RBP13.36□□□□□ -0.27
EPB41-208ENST00000460378 KNSTRNQ9Y448 316 aa13.36□□□□□ -0.27
EPB41-208ENST00000460378 EVC2Q86UK5 1308 aa13.36□□□□□ -0.27
EPB41-208ENST00000460378 YTHDC1Q96MU7 727 aaKnown RBP13.36□□□□□ -0.27
EPB41-208ENST00000460378 NLRP13Q86W25 1043 aa13.35□□□□□ -0.27
EPB41-208ENST00000460378 SLAIN2Q9P270 581 aa13.35□□□□□ -0.27
EPB41-208ENST00000460378 PTPRMP28827 1452 aa13.35□□□□□ -0.27
EPB41-208ENST00000460378 CAMSAP2Q08AD1 1489 aa13.35□□□□□ -0.27
EPB41-208ENST00000460378 ABTB2Q8N961 1025 aa13.35□□□□□ -0.27
EPB41-208ENST00000460378 SUPT6HQ7KZ85 1726 aaKnown RBP13.35□□□□□ -0.27
EPB41-208ENST00000460378 SETD5Q9C0A6 1442 aa13.34□□□□□ -0.27
EPB41-208ENST00000460378 XPCQ01831 940 aaPredicted RBP13.34□□□□□ -0.27
EPB41-208ENST00000460378 NUDCQ9Y266 331 aa13.34□□□□□ -0.27
EPB41-208ENST00000460378 NLRP2Q9NX02 1062 aa13.33□□□□□ -0.28
EPB41-208ENST00000460378 ZRANB1Q9UGI0 708 aa13.33□□□□□ -0.28
EPB41-208ENST00000460378 PMFBP1Q8TBY8 1022 aa13.33□□□□□ -0.28
EPB41-208ENST00000460378 TOM1L2Q6ZVM7 507 aa13.33□□□□□ -0.28
EPB41-208ENST00000460378 ADCY10Q96PN6 1610 aa13.32□□□□□ -0.28
EPB41-208ENST00000460378 NLRP6P59044 892 aa13.32□□□□□ -0.28
EPB41-208ENST00000460378 RTEL1-TNFRSF6BF6WH68 1400 aa13.32□□□□□ -0.28
EPB41-208ENST00000460378 RRBP1Q9P2E9 1410 aaKnown RBP13.32□□□□□ -0.28
EPB41-208ENST00000460378 GPATCH8Q9UKJ3 1502 aaKnown RBP13.32□□□□□ -0.28
EPB41-208ENST00000460378 NPHP4O75161 1426 aaPredicted RBP13.32□□□□□ -0.28
EPB41-208ENST00000460378 FOXO3O43524 673 aa13.32□□□□□ -0.28
EPB41-208ENST00000460378 BAG6P46379 1132 aa13.32□□□□□ -0.28
EPB41-208ENST00000460378 ABCA8O94911 1581 aa13.31□□□□□ -0.28
EPB41-208ENST00000460378 HRCP23327 699 aa13.31□□□□□ -0.28
EPB41-208ENST00000460378 SYCP2Q9BX26 1530 aa13.31□□□□□ -0.28
EPB41-208ENST00000460378 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms