RNA–Protein interactions for RNA: ENST00000460177.1

LCNL1-203, Transcript of lipocalin like 1, humanhuman

TSL 1 (best)

Gene LCNL1, Length 1,704 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCNL1-203ENST00000460177 TRHP20396 242 aaPredicted RBP32.34■■■□□ 2.77
LCNL1-203ENST00000460177 PKD2Q13563 968 aa32.34■■■□□ 2.77
LCNL1-203ENST00000460177 FRMPD1Q5SYB0 1578 aa32.33■■■□□ 2.77
LCNL1-203ENST00000460177 RPRD2Q5VT52 1461 aaKnown RBP32.33■■■□□ 2.77
LCNL1-203ENST00000460177 ABCA6Q8N139 1617 aa32.33■■■□□ 2.77
LCNL1-203ENST00000460177 TEX14Q8IWB6 1497 aa32.32■■■□□ 2.76
LCNL1-203ENST00000460177 DHX29Q7Z478 1369 aaKnown RBP32.29■■■□□ 2.76
LCNL1-203ENST00000460177 MYT1LQ9UL68 1186 aa32.29■■■□□ 2.76
LCNL1-203ENST00000460177 A2MP01023 1474 aa32.26■■■□□ 2.75
LCNL1-203ENST00000460177 MROH1Q8NDA8 1641 aa32.25■■■□□ 2.75
LCNL1-203ENST00000460177 PRDM15P57071 1507 aaPredicted RBP32.24■■■□□ 2.75
LCNL1-203ENST00000460177 DIP2CQ9Y2E4 1556 aa32.24■■■□□ 2.75
LCNL1-203ENST00000460177 RAPGEF3O95398 923 aa32.23■■■□□ 2.75
LCNL1-203ENST00000460177 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.23■■■□□ 2.75
LCNL1-203ENST00000460177 ZMYM4Q5VZL5 1548 aa32.23■■■□□ 2.75
LCNL1-203ENST00000460177 VWDEQ8N2E2 1590 aa32.23■■■□□ 2.75
LCNL1-203ENST00000460177 PPP1R15AO75807 674 aaPredicted RBP32.23■■■□□ 2.75
LCNL1-203ENST00000460177 BCORL1Q5H9F3 1711 aa32.22■■■□□ 2.75
LCNL1-203ENST00000460177 RNF17Q9BXT8 1623 aaKnown RBP32.22■■■□□ 2.75
LCNL1-203ENST00000460177 ZNF316A6NFI3 1004 aaPredicted RBP32.2■■■□□ 2.75
LCNL1-203ENST00000460177 TET3O43151 1660 aa32.17■■■□□ 2.74
LCNL1-203ENST00000460177 E9PCH4 1651 aa32.15■■■□□ 2.74
LCNL1-203ENST00000460177 KIF3BO15066 747 aa32.13■■■□□ 2.73
LCNL1-203ENST00000460177 YEATS2Q9ULM3 1422 aa32.1■■■□□ 2.73
LCNL1-203ENST00000460177 KANK1Q14678 1352 aa32.1■■■□□ 2.73
LCNL1-203ENST00000460177 PLA2R1Q13018 1463 aa32.09■■■□□ 2.73
LCNL1-203ENST00000460177 L3MBTL2Q969R5 705 aa32.08■■■□□ 2.73
LCNL1-203ENST00000460177 ATP10AO60312 1499 aa32.07■■■□□ 2.72
LCNL1-203ENST00000460177 CEP152O94986 1710 aa32.07■■■□□ 2.72
LCNL1-203ENST00000460177 COL17A1Q9UMD9 1497 aaPredicted RBP32.05■■■□□ 2.72
LCNL1-203ENST00000460177 SPHKAPQ2M3C7 1700 aa32.04■■■□□ 2.72
LCNL1-203ENST00000460177 LMTK2Q8IWU2 1503 aa32.04■■■□□ 2.72
LCNL1-203ENST00000460177 EFCAB6Q5THR3 1501 aa32.02■■■□□ 2.72
LCNL1-203ENST00000460177 CCDC144AA2RUR9 1427 aa32.01■■■□□ 2.71
LCNL1-203ENST00000460177 TRPM2O94759 1503 aa31.99■■■□□ 2.71
LCNL1-203ENST00000460177 REREQ9P2R6 1566 aa31.98■■■□□ 2.71
LCNL1-203ENST00000460177 PTPRTO14522 1441 aa31.94■■■□□ 2.7
LCNL1-203ENST00000460177 ARHGEF40Q8TER5 1519 aa31.94■■■□□ 2.7
LCNL1-203ENST00000460177 ABCC3O15438 1527 aa31.92■■■□□ 2.7
LCNL1-203ENST00000460177 ZC3H13Q5T200 1668 aaKnown RBP31.91■■■□□ 2.7
LCNL1-203ENST00000460177 CLTCL1P53675 1640 aa31.9■■■□□ 2.7
LCNL1-203ENST00000460177 CAMSAP1Q5T5Y3 1602 aa31.89■■■□□ 2.7
LCNL1-203ENST00000460177 NBPF8Q3BBV2 869 aa31.86■■■□□ 2.69
LCNL1-203ENST00000460177 GGT6Q6P531 493 aa31.86■■■□□ 2.69
LCNL1-203ENST00000460177 AGLP35573 1532 aa31.86■■■□□ 2.69
LCNL1-203ENST00000460177 SIGLEC1Q9BZZ2 1709 aa31.86■■■□□ 2.69
LCNL1-203ENST00000460177 DIEXFQ68CQ4 756 aaKnown RBP31.84■■■□□ 2.69
LCNL1-203ENST00000460177 UHRF1BP1Q6BDS2 1440 aa31.84■■■□□ 2.69
LCNL1-203ENST00000460177 NPATQ14207 1427 aa31.8■■■□□ 2.68
LCNL1-203ENST00000460177 SPATA31E1Q6ZUB1 1445 aa31.78■■■□□ 2.68
LCNL1-203ENST00000460177 WASHC2CQ9Y4E1 1318 aa31.76■■■□□ 2.67
LCNL1-203ENST00000460177 NEURL4Q96JN8 1562 aa31.75■■■□□ 2.67
LCNL1-203ENST00000460177 UGGT1Q9NYU2 1555 aa31.75■■■□□ 2.67
LCNL1-203ENST00000460177 RALGAPBQ86X10 1494 aa31.73■■■□□ 2.67
LCNL1-203ENST00000460177 KIF1BO60333 1816 aa31.72■■■□□ 2.67
LCNL1-203ENST00000460177 CFAP65Q6ZU64 1925 aaKnown RBP31.71■■■□□ 2.67
LCNL1-203ENST00000460177 ARHGAP31Q2M1Z3 1444 aa31.7■■■□□ 2.67
LCNL1-203ENST00000460177 DCAF11Q8TEB1 546 aa31.7■■■□□ 2.67
LCNL1-203ENST00000460177 CNTLNQ9NXG0 1405 aa31.68■■■□□ 2.66
LCNL1-203ENST00000460177 TRPM1Q7Z4N2 1603 aa31.68■■■□□ 2.66
LCNL1-203ENST00000460177 RGL3Q3MIN7 710 aa31.68■■■□□ 2.66
LCNL1-203ENST00000460177 PRAG1Q86YV5 1406 aa31.68■■■□□ 2.66
LCNL1-203ENST00000460177 MROH2AA6NES4 1674 aa31.68■■■□□ 2.66
LCNL1-203ENST00000460177 ZNF326Q5BKZ1 582 aaKnown RBP31.67■■■□□ 2.66
LCNL1-203ENST00000460177 HIRIP3Q9BW71 556 aaPredicted RBP31.66■■■□□ 2.66
LCNL1-203ENST00000460177 NOS1P29475 1434 aa31.65■■■□□ 2.66
LCNL1-203ENST00000460177 KDM2AQ9Y2K7 1162 aa31.65■■■□□ 2.66
LCNL1-203ENST00000460177 SYNMO15061 1565 aa31.65■■■□□ 2.66
LCNL1-203ENST00000460177 CLTCQ00610 1675 aaKnown RBP31.63■■■□□ 2.65
LCNL1-203ENST00000460177 PIK3C2BO00750 1634 aa31.63■■■□□ 2.65
LCNL1-203ENST00000460177 HSPA5P11021 654 aaKnown RBP31.63■■■□□ 2.65
LCNL1-203ENST00000460177 PREX1Q8TCU6 1659 aa31.63■■■□□ 2.65
LCNL1-203ENST00000460177 ADGRB3O60242 1522 aa31.62■■■□□ 2.65
LCNL1-203ENST00000460177 EIF4G2P78344 907 aaKnown RBP eCLIP31.62■■■□□ 2.65
LCNL1-203ENST00000460177 IFT172Q9UG01 1749 aa31.61■■■□□ 2.65
LCNL1-203ENST00000460177 MADDQ8WXG6 1647 aa31.6■■■□□ 2.65
LCNL1-203ENST00000460177 PPP6R1Q9UPN7 881 aa31.57■■■□□ 2.64
LCNL1-203ENST00000460177 LAMC1P11047 1609 aa31.55■■■□□ 2.64
LCNL1-203ENST00000460177 POLR1AO95602 1720 aaPredicted RBP31.52■■■□□ 2.64
LCNL1-203ENST00000460177 USP47Q96K76 1375 aa31.51■■■□□ 2.64
LCNL1-203ENST00000460177 MYOM2P54296 1465 aa31.5■■■□□ 2.63
LCNL1-203ENST00000460177 ERVK-7P63135 1459 aa31.49■■■□□ 2.63
LCNL1-203ENST00000460177 ROCK2O75116 1388 aaKnown RBP31.48■■■□□ 2.63
LCNL1-203ENST00000460177 GPRASP1Q5JY77 1395 aa31.48■■■□□ 2.63
LCNL1-203ENST00000460177 PPLO60437 1756 aa31.47■■■□□ 2.63
LCNL1-203ENST00000460177 MLECQ14165 292 aa31.46■■■□□ 2.63
LCNL1-203ENST00000460177 STAC3Q96MF2 364 aa31.46■■■□□ 2.63
LCNL1-203ENST00000460177 CARD11Q9BXL7 1154 aa31.45■■■□□ 2.63
LCNL1-203ENST00000460177 KIAA1210Q9ULL0 1709 aa31.44■■■□□ 2.62
LCNL1-203ENST00000460177 SPATA31D1Q6ZQQ2 1576 aa31.43■■■□□ 2.62
LCNL1-203ENST00000460177 ARID4BQ4LE39 1312 aaPredicted RBP31.4■■■□□ 2.62
LCNL1-203ENST00000460177 NRXN1Q9ULB1 1477 aa31.4■■■□□ 2.62
LCNL1-203ENST00000460177 MYO5BQ9ULV0 1848 aa31.4■■■□□ 2.62
LCNL1-203ENST00000460177 WASHC2AQ641Q2 1341 aa31.38■■■□□ 2.61
LCNL1-203ENST00000460177 DDX10Q13206 875 aaKnown RBP31.38■■■□□ 2.61
LCNL1-203ENST00000460177 NBPF1Q3BBV0 1214 aa31.38■■■□□ 2.61
LCNL1-203ENST00000460177 TMEM131LA2VDJ0 1609 aa31.37■■■□□ 2.61
LCNL1-203ENST00000460177 CHGAP10645 457 aaKnown RBP31.36■■■□□ 2.61
LCNL1-203ENST00000460177 MIER1Q8N108 512 aa31.36■■■□□ 2.61
LCNL1-203ENST00000460177 SLC52A1Q9NWF4 448 aa31.36■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms