RNA–Protein interactions for RNA: ENST00000460132.5

PLOD3-208, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 3

Gene PLOD3, Length 578 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-208ENST00000460132 KIF15Q9NS87 1388 aa22.63■■□□□ 1.21
PLOD3-208ENST00000460132 KDM5DQ9BY66 1539 aa22.63■■□□□ 1.21
PLOD3-208ENST00000460132 FBXO31Q5XUX0 539 aaPredicted RBP22.63■■□□□ 1.21
PLOD3-208ENST00000460132 CHIC2Q9UKJ5 165 aa22.63■■□□□ 1.21
PLOD3-208ENST00000460132 DNMT1P26358 1616 aaKnown RBP22.62■■□□□ 1.21
PLOD3-208ENST00000460132 FAM50AQ14320 339 aaKnown RBP22.62■■□□□ 1.21
PLOD3-208ENST00000460132 DUOX2Q9NRD8 1548 aa22.62■■□□□ 1.21
PLOD3-208ENST00000460132 DMRT2Q9Y5R5 561 aa22.61■■□□□ 1.21
PLOD3-208ENST00000460132 CROCC2H7BZ55 1655 aa22.61■■□□□ 1.21
PLOD3-208ENST00000460132 FAM135AQ9P2D6 1515 aa22.61■■□□□ 1.21
PLOD3-208ENST00000460132 STRCQ7RTU9 1775 aa22.61■■□□□ 1.21
PLOD3-208ENST00000460132 PPARGC1BQ86YN6 1023 aaKnown RBP22.59■■□□□ 1.21
PLOD3-208ENST00000460132 RNF17Q9BXT8 1623 aaKnown RBP22.59■■□□□ 1.21
PLOD3-208ENST00000460132 EIF2AK4Q9P2K8 1649 aaKnown RBP22.58■■□□□ 1.21
PLOD3-208ENST00000460132 PZPP20742 1482 aa22.58■■□□□ 1.2
PLOD3-208ENST00000460132 ANKRD30AQ9BXX3 1397 aa22.57■■□□□ 1.2
PLOD3-208ENST00000460132 MYO3AQ8NEV4 1616 aa22.56■■□□□ 1.2
PLOD3-208ENST00000460132 NCOA1Q15788 1441 aa22.56■■□□□ 1.2
PLOD3-208ENST00000460132 TNRQ92752 1358 aa22.55■■□□□ 1.2
PLOD3-208ENST00000460132 ABCC3O15438 1527 aa22.55■■□□□ 1.2
PLOD3-208ENST00000460132 ERBINQ96RT1 1412 aa22.55■■□□□ 1.2
PLOD3-208ENST00000460132 CAMSAP1Q5T5Y3 1602 aa22.54■■□□□ 1.2
PLOD3-208ENST00000460132 MROH1Q8NDA8 1641 aa22.54■■□□□ 1.2
PLOD3-208ENST00000460132 CEP170BQ9Y4F5 1589 aaPredicted RBP22.53■■□□□ 1.2
PLOD3-208ENST00000460132 PTPRTO14522 1441 aa22.52■■□□□ 1.2
PLOD3-208ENST00000460132 NCKAP5LQ9HCH0 1330 aa22.52■■□□□ 1.2
PLOD3-208ENST00000460132 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.51■■□□□ 1.19
PLOD3-208ENST00000460132 A2ML1A8K2U0 1454 aa22.51■■□□□ 1.19
PLOD3-208ENST00000460132 ZNF142P52746 1687 aaPredicted RBP22.51■■□□□ 1.19
PLOD3-208ENST00000460132 FBXO41Q8TF61 875 aa22.49■■□□□ 1.19
PLOD3-208ENST00000460132 ADGRL2O95490 1459 aa22.48■■□□□ 1.19
PLOD3-208ENST00000460132 CERKQ8TCT0 537 aa22.48■■□□□ 1.19
PLOD3-208ENST00000460132 ZC3H13Q5T200 1668 aaKnown RBP22.48■■□□□ 1.19
PLOD3-208ENST00000460132 PLA2R1Q13018 1463 aa22.47■■□□□ 1.19
PLOD3-208ENST00000460132 PKD2Q13563 968 aa22.46■■□□□ 1.19
PLOD3-208ENST00000460132 PRDM15P57071 1507 aaPredicted RBP22.46■■□□□ 1.19
PLOD3-208ENST00000460132 CEP152O94986 1710 aa22.44■■□□□ 1.18
PLOD3-208ENST00000460132 NLRP1Q9C000 1473 aa22.43■■□□□ 1.18
PLOD3-208ENST00000460132 KANK1Q14678 1352 aa22.43■■□□□ 1.18
PLOD3-208ENST00000460132 DEPDC5O75140 1603 aa22.42■■□□□ 1.18
PLOD3-208ENST00000460132 ERVK-7P63135 1459 aa22.42■■□□□ 1.18
PLOD3-208ENST00000460132 SPATA31D1Q6ZQQ2 1576 aa22.42■■□□□ 1.18
PLOD3-208ENST00000460132 ARHGAP31Q2M1Z3 1444 aa22.41■■□□□ 1.18
PLOD3-208ENST00000460132 THEMISQ8N1K5 641 aaPredicted RBP22.41■■□□□ 1.18
PLOD3-208ENST00000460132 ANKRD50Q9ULJ7 1429 aa22.4■■□□□ 1.18
PLOD3-208ENST00000460132 ITGAEP38570 1179 aa22.4■■□□□ 1.18
PLOD3-208ENST00000460132 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.38■■□□□ 1.17
PLOD3-208ENST00000460132 UGGT1Q9NYU2 1555 aa22.38■■□□□ 1.17
PLOD3-208ENST00000460132 VWDEQ8N2E2 1590 aa22.37■■□□□ 1.17
PLOD3-208ENST00000460132 ROCK1Q13464 1354 aa22.36■■□□□ 1.17
PLOD3-208ENST00000460132 CFAP65Q6ZU64 1925 aaKnown RBP22.35■■□□□ 1.17
PLOD3-208ENST00000460132 ANKLE2Q86XL3 938 aa22.35■■□□□ 1.17
PLOD3-208ENST00000460132 LMTK2Q8IWU2 1503 aa22.35■■□□□ 1.17
PLOD3-208ENST00000460132 LTBP4Q8N2S1 1624 aa22.33■■□□□ 1.17
PLOD3-208ENST00000460132 ZNF335Q9H4Z2 1342 aaPredicted RBP22.32■■□□□ 1.16
PLOD3-208ENST00000460132 RRBP1Q9P2E9 1410 aaKnown RBP22.29■■□□□ 1.16
PLOD3-208ENST00000460132 NEURL4Q96JN8 1562 aa22.29■■□□□ 1.16
PLOD3-208ENST00000460132 EFCAB6Q5THR3 1501 aa22.26■■□□□ 1.15
PLOD3-208ENST00000460132 POLR1AO95602 1720 aaPredicted RBP22.26■■□□□ 1.15
PLOD3-208ENST00000460132 IDI1Q13907 227 aa22.26■■□□□ 1.15
PLOD3-208ENST00000460132 NPHP4O75161 1426 aaPredicted RBP22.24■■□□□ 1.15
PLOD3-208ENST00000460132 NOS1P29475 1434 aa22.24■■□□□ 1.15
PLOD3-208ENST00000460132 MED14O60244 1454 aa22.24■■□□□ 1.15
PLOD3-208ENST00000460132 UBR1Q8IWV7 1749 aa22.24■■□□□ 1.15
PLOD3-208ENST00000460132 UNC13BO14795 1591 aa22.22■■□□□ 1.15
PLOD3-208ENST00000460132 STAG3Q9UJ98 1225 aa22.22■■□□□ 1.15
PLOD3-208ENST00000460132 SYNMO15061 1565 aa22.21■■□□□ 1.15
PLOD3-208ENST00000460132 LTKP29376 864 aa22.21■■□□□ 1.15
PLOD3-208ENST00000460132 TXNDC2Q86VQ3 553 aa22.21■■□□□ 1.15
PLOD3-208ENST00000460132 PIK3C2BO00750 1634 aa22.2■■□□□ 1.15
PLOD3-208ENST00000460132 NUP155O75694 1391 aa22.2■■□□□ 1.14
PLOD3-208ENST00000460132 RPRD2Q5VT52 1461 aaKnown RBP22.2■■□□□ 1.14
PLOD3-208ENST00000460132 SLC52A1Q9NWF4 448 aa22.19■■□□□ 1.14
PLOD3-208ENST00000460132 ARHGAP23Q9P227 1491 aa22.19■■□□□ 1.14
PLOD3-208ENST00000460132 TET3O43151 1660 aa22.18■■□□□ 1.14
PLOD3-208ENST00000460132 SLIT1O75093 1534 aa22.18■■□□□ 1.14
PLOD3-208ENST00000460132 IQSEC2Q5JU85 1478 aa22.18■■□□□ 1.14
PLOD3-208ENST00000460132 SCAF11Q99590 1463 aaKnown RBP22.17■■□□□ 1.14
PLOD3-208ENST00000460132 TMEM2Q9UHN6 1383 aa22.17■■□□□ 1.14
PLOD3-208ENST00000460132 EID1Q9Y6B2 187 aa22.17■■□□□ 1.14
PLOD3-208ENST00000460132 IQGAP1P46940 1657 aa22.15■■□□□ 1.14
PLOD3-208ENST00000460132 IQGAP3Q86VI3 1631 aa22.13■■□□□ 1.13
PLOD3-208ENST00000460132 GCC2Q8IWJ2 1684 aa22.13■■□□□ 1.13
PLOD3-208ENST00000460132 NAIPQ13075 1403 aa22.12■■□□□ 1.13
PLOD3-208ENST00000460132 KDM5AP29375 1690 aaKnown RBP22.11■■□□□ 1.13
PLOD3-208ENST00000460132 E9PCH4 1651 aa22.11■■□□□ 1.13
PLOD3-208ENST00000460132 ADGRB3O60242 1522 aa22.1■■□□□ 1.13
PLOD3-208ENST00000460132 CPS1P31327 1500 aa22.1■■□□□ 1.13
PLOD3-208ENST00000460132 UBAP1LF5GYI3 381 aa22.09■■□□□ 1.13
PLOD3-208ENST00000460132 CHGAP10645 457 aaKnown RBP22.05■■□□□ 1.12
PLOD3-208ENST00000460132 HFM1A2PYH4 1435 aa22.05■■□□□ 1.12
PLOD3-208ENST00000460132 TMEM131LA2VDJ0 1609 aa22.02■■□□□ 1.12
PLOD3-208ENST00000460132 SLC26A8Q96RN1 970 aa22.02■■□□□ 1.12
PLOD3-208ENST00000460132 STRCP1A6NGW2 1772 aa22.02■■□□□ 1.11
PLOD3-208ENST00000460132 ZFYVE9O95405 1425 aa22.01■■□□□ 1.11
PLOD3-208ENST00000460132 RIMS2Q9UQ26 1411 aa22■■□□□ 1.11
PLOD3-208ENST00000460132 HDGFP51858 240 aaKnown RBP22■■□□□ 1.11
PLOD3-208ENST00000460132 TRIM52Q96A61 297 aa22■■□□□ 1.11
PLOD3-208ENST00000460132 SENP3Q9H4L4 574 aaPredicted RBP22■■□□□ 1.11
PLOD3-208ENST00000460132 LRRC7Q96NW7 1537 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms