RNA–Protein interactions for RNA: ENST00000460002.1

PCOLCE-202, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 3

Gene PCOLCE, Length 447 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-202ENST00000460002 ZNF777Q9ULD5 760 aaPredicted RBP22.77■■□□□ 1.24
PCOLCE-202ENST00000460002 DEPDC5O75140 1603 aa22.77■■□□□ 1.24
PCOLCE-202ENST00000460002 UPF1Q92900 1129 aaKnown RBP eCLIP22.76■■□□□ 1.23
PCOLCE-202ENST00000460002 INO80Q9ULG1 1556 aaPredicted RBP22.76■■□□□ 1.23
PCOLCE-202ENST00000460002 THEMISQ8N1K5 641 aaPredicted RBP22.75■■□□□ 1.23
PCOLCE-202ENST00000460002 CDC42BPAQ5VT25 1732 aa22.74■■□□□ 1.23
PCOLCE-202ENST00000460002 IQGAP1P46940 1657 aa22.74■■□□□ 1.23
PCOLCE-202ENST00000460002 ARHGAP35Q9NRY4 1499 aa22.72■■□□□ 1.23
PCOLCE-202ENST00000460002 PZPP20742 1482 aa22.7■■□□□ 1.22
PCOLCE-202ENST00000460002 UGGT1Q9NYU2 1555 aa22.7■■□□□ 1.22
PCOLCE-202ENST00000460002 FAM135BQ49AJ0 1406 aa22.69■■□□□ 1.22
PCOLCE-202ENST00000460002 FAM135AQ9P2D6 1515 aa22.68■■□□□ 1.22
PCOLCE-202ENST00000460002 EEA1Q15075 1411 aa22.67■■□□□ 1.22
PCOLCE-202ENST00000460002 NLRP1Q9C000 1473 aa22.66■■□□□ 1.22
PCOLCE-202ENST00000460002 MIA2Q96PC5 1412 aa22.66■■□□□ 1.22
PCOLCE-202ENST00000460002 KIAA1107Q9UPP5 1409 aa22.65■■□□□ 1.22
PCOLCE-202ENST00000460002 GPATCH8Q9UKJ3 1502 aaKnown RBP22.63■■□□□ 1.21
PCOLCE-202ENST00000460002 ADGBQ8N7X0 1667 aa22.62■■□□□ 1.21
PCOLCE-202ENST00000460002 SRCAPQ6ZRS2 3230 aa22.62■■□□□ 1.21
PCOLCE-202ENST00000460002 XIRP1Q702N8 1843 aaKnown RBP22.61■■□□□ 1.21
PCOLCE-202ENST00000460002 ZC3H13Q5T200 1668 aaKnown RBP22.6■■□□□ 1.21
PCOLCE-202ENST00000460002 KDM5DQ9BY66 1539 aa22.59■■□□□ 1.21
PCOLCE-202ENST00000460002 PLEKHH2Q8IVE3 1493 aa22.58■■□□□ 1.2
PCOLCE-202ENST00000460002 CCDC18Q5T9S5 1454 aa22.56■■□□□ 1.2
PCOLCE-202ENST00000460002 DHX29Q7Z478 1369 aaKnown RBP22.56■■□□□ 1.2
PCOLCE-202ENST00000460002 TRIM52Q96A61 297 aa22.55■■□□□ 1.2
PCOLCE-202ENST00000460002 ROBO1Q9Y6N7 1651 aa22.55■■□□□ 1.2
PCOLCE-202ENST00000460002 KIF3BO15066 747 aa22.54■■□□□ 1.2
PCOLCE-202ENST00000460002 WASHC2CQ9Y4E1 1318 aa22.54■■□□□ 1.2
PCOLCE-202ENST00000460002 CFDP1Q9UEE9 299 aaPredicted RBP22.53■■□□□ 1.2
PCOLCE-202ENST00000460002 EHMT2Q96KQ7 1210 aa22.52■■□□□ 1.2
PCOLCE-202ENST00000460002 UBTFP17480 764 aaKnown RBP22.5■■□□□ 1.19
PCOLCE-202ENST00000460002 CASKIN1Q8WXD9 1431 aa22.49■■□□□ 1.19
PCOLCE-202ENST00000460002 SCAF11Q99590 1463 aaKnown RBP22.48■■□□□ 1.19
PCOLCE-202ENST00000460002 JCADQ9P266 1359 aa22.48■■□□□ 1.19
PCOLCE-202ENST00000460002 TMEM94Q12767 1356 aa22.47■■□□□ 1.19
PCOLCE-202ENST00000460002 RTEL1-TNFRSF6BF6WH68 1400 aa22.47■■□□□ 1.19
PCOLCE-202ENST00000460002 LTKP29376 864 aa22.46■■□□□ 1.19
PCOLCE-202ENST00000460002 ZNF644Q9H582 1327 aaPredicted RBP22.45■■□□□ 1.18
PCOLCE-202ENST00000460002 MBD5Q9P267 1494 aa22.45■■□□□ 1.18
PCOLCE-202ENST00000460002 LRP6O75581 1613 aa22.45■■□□□ 1.18
PCOLCE-202ENST00000460002 ZNF772Q68DY9 489 aaPredicted RBP22.44■■□□□ 1.18
PCOLCE-202ENST00000460002 MAP3K1Q13233 1512 aa22.42■■□□□ 1.18
PCOLCE-202ENST00000460002 CCNB3Q8WWL7 1395 aa22.41■■□□□ 1.18
PCOLCE-202ENST00000460002 LRRC9Q6ZRR7 1453 aa22.41■■□□□ 1.18
PCOLCE-202ENST00000460002 TXNDC2Q86VQ3 553 aa22.4■■□□□ 1.18
PCOLCE-202ENST00000460002 RBM33Q96EV2 1170 aaKnown RBP22.4■■□□□ 1.18
PCOLCE-202ENST00000460002 NCOA2Q15596 1464 aa22.4■■□□□ 1.18
PCOLCE-202ENST00000460002 ARHGAP23Q9P227 1491 aa22.4■■□□□ 1.18
PCOLCE-202ENST00000460002 PHLPP1O60346 1717 aa22.4■■□□□ 1.18
PCOLCE-202ENST00000460002 UBR1Q8IWV7 1749 aa22.39■■□□□ 1.17
PCOLCE-202ENST00000460002 RXRBP28702 533 aa22.38■■□□□ 1.17
PCOLCE-202ENST00000460002 ERVK-7P63135 1459 aa22.38■■□□□ 1.17
PCOLCE-202ENST00000460002 SLIT1O75093 1534 aa22.36■■□□□ 1.17
PCOLCE-202ENST00000460002 MEX3CQ5U5Q3 659 aaKnown RBP22.36■■□□□ 1.17
PCOLCE-202ENST00000460002 CHIC1Q5VXU3 224 aa22.36■■□□□ 1.17
PCOLCE-202ENST00000460002 CDK12Q9NYV4 1490 aaPredicted RBP22.35■■□□□ 1.17
PCOLCE-202ENST00000460002 SPATA31A6Q5VVP1 1343 aa22.34■■□□□ 1.17
PCOLCE-202ENST00000460002 COL16A1Q07092 1604 aaPredicted RBP22.34■■□□□ 1.17
PCOLCE-202ENST00000460002 PROSER2Q86WR7 435 aaPredicted RBP22.33■■□□□ 1.17
PCOLCE-202ENST00000460002 ABCC3O15438 1527 aa22.32■■□□□ 1.16
PCOLCE-202ENST00000460002 KCNA6P17658 529 aa22.32■■□□□ 1.16
PCOLCE-202ENST00000460002 SLAIN2Q9P270 581 aa22.32■■□□□ 1.16
PCOLCE-202ENST00000460002 FYCO1Q9BQS8 1478 aa22.32■■□□□ 1.16
PCOLCE-202ENST00000460002 EID1Q9Y6B2 187 aa22.29■■□□□ 1.16
PCOLCE-202ENST00000460002 PRDM15P57071 1507 aaPredicted RBP22.29■■□□□ 1.16
PCOLCE-202ENST00000460002 FGD6Q6ZV73 1430 aa22.29■■□□□ 1.16
PCOLCE-202ENST00000460002 MSH6P52701 1360 aa22.26■■□□□ 1.15
PCOLCE-202ENST00000460002 TIAM1Q13009 1591 aa22.26■■□□□ 1.15
PCOLCE-202ENST00000460002 CCDC141Q6ZP82 1450 aa22.25■■□□□ 1.15
PCOLCE-202ENST00000460002 RGS12O14924 1447 aa22.23■■□□□ 1.15
PCOLCE-202ENST00000460002 SLC26A8Q96RN1 970 aa22.23■■□□□ 1.15
PCOLCE-202ENST00000460002 TMEM2Q9UHN6 1383 aa22.23■■□□□ 1.15
PCOLCE-202ENST00000460002 NKTRP30414 1462 aaKnown RBP22.22■■□□□ 1.15
PCOLCE-202ENST00000460002 SETBP1Q9Y6X0 1596 aa22.21■■□□□ 1.15
PCOLCE-202ENST00000460002 MTUS2Q5JR59 1369 aa22.2■■□□□ 1.14
PCOLCE-202ENST00000460002 NWD1Q149M9 1564 aa22.2■■□□□ 1.14
PCOLCE-202ENST00000460002 ZRANB1Q9UGI0 708 aa22.19■■□□□ 1.14
PCOLCE-202ENST00000460002 AFF2P51816 1311 aa22.19■■□□□ 1.14
PCOLCE-202ENST00000460002 TET3O43151 1660 aa22.19■■□□□ 1.14
PCOLCE-202ENST00000460002 SHPRHQ149N8 1683 aa22.19■■□□□ 1.14
PCOLCE-202ENST00000460002 CAMSAP2Q08AD1 1489 aa22.18■■□□□ 1.14
PCOLCE-202ENST00000460002 MROH1Q8NDA8 1641 aa22.17■■□□□ 1.14
PCOLCE-202ENST00000460002 NUTM2BA6NNL0 878 aaPredicted RBP22.16■■□□□ 1.14
PCOLCE-202ENST00000460002 NUTM2EB1AL46 878 aaPredicted RBP22.16■■□□□ 1.14
PCOLCE-202ENST00000460002 NUTM2DQ5VT03 806 aaPredicted RBP22.16■■□□□ 1.14
PCOLCE-202ENST00000460002 NUTM2AQ8IVF1 878 aaPredicted RBP22.16■■□□□ 1.14
PCOLCE-202ENST00000460002 AHDC1Q5TGY3 1603 aaPredicted RBP22.15■■□□□ 1.14
PCOLCE-202ENST00000460002 CFAP65Q6ZU64 1925 aaKnown RBP22.15■■□□□ 1.14
PCOLCE-202ENST00000460002 PIK3C2BO00750 1634 aa22.14■■□□□ 1.14
PCOLCE-202ENST00000460002 RSPH4AQ5TD94 716 aa22.13■■□□□ 1.13
PCOLCE-202ENST00000460002 CEP152O94986 1710 aa22.13■■□□□ 1.13
PCOLCE-202ENST00000460002 KDM5AP29375 1690 aaKnown RBP22.13■■□□□ 1.13
PCOLCE-202ENST00000460002 RBM6P78332 1123 aaKnown RBP22.11■■□□□ 1.13
PCOLCE-202ENST00000460002 DIP2AQ14689 1571 aa22.1■■□□□ 1.13
PCOLCE-202ENST00000460002 QTRT2Q9H974 415 aaKnown RBP22.09■■□□□ 1.13
PCOLCE-202ENST00000460002 FOXD1Q16676 465 aa22.08■■□□□ 1.13
PCOLCE-202ENST00000460002 STAG3Q9UJ98 1225 aa22.08■■□□□ 1.13
PCOLCE-202ENST00000460002 ATAD2Q6PL18 1390 aa22.08■■□□□ 1.12
PCOLCE-202ENST00000460002 ARHGAP31Q2M1Z3 1444 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms