RNA–Protein interactions for RNA: ENST00000459997.1

SRM-202, Transcript of spermidine synthase, humanhuman

TSL 5

Gene SRM, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-202ENST00000459997 ZNF142P52746 1687 aaPredicted RBP32.61■■■□□ 2.81
SRM-202ENST00000459997 FBXO41Q8TF61 875 aa32.6■■■□□ 2.81
SRM-202ENST00000459997 WASHC2CQ9Y4E1 1318 aa32.59■■■□□ 2.81
SRM-202ENST00000459997 CAMSAP1Q5T5Y3 1602 aa32.59■■■□□ 2.81
SRM-202ENST00000459997 RNF17Q9BXT8 1623 aaKnown RBP32.59■■■□□ 2.81
SRM-202ENST00000459997 EIF2AK4Q9P2K8 1649 aaKnown RBP32.59■■■□□ 2.81
SRM-202ENST00000459997 NCOA1Q15788 1441 aa32.58■■■□□ 2.81
SRM-202ENST00000459997 CEP170BQ9Y4F5 1589 aaPredicted RBP32.58■■■□□ 2.81
SRM-202ENST00000459997 SHANK2Q9UPX8 1470 aa32.57■■■□□ 2.8
SRM-202ENST00000459997 ABCC5O15440 1437 aa32.57■■■□□ 2.8
SRM-202ENST00000459997 TCOF1Q13428 1488 aaKnown RBP32.56■■■□□ 2.8
SRM-202ENST00000459997 DNMT1P26358 1616 aaKnown RBP32.55■■■□□ 2.8
SRM-202ENST00000459997 PZPP20742 1482 aa32.54■■■□□ 2.8
SRM-202ENST00000459997 DUOX2Q9NRD8 1548 aa32.54■■■□□ 2.8
SRM-202ENST00000459997 PTPRTO14522 1441 aa32.53■■■□□ 2.8
SRM-202ENST00000459997 DAPK1P53355 1430 aa32.53■■■□□ 2.8
SRM-202ENST00000459997 FBXO31Q5XUX0 539 aaPredicted RBP32.5■■■□□ 2.79
SRM-202ENST00000459997 ZC3H13Q5T200 1668 aaKnown RBP32.5■■■□□ 2.79
SRM-202ENST00000459997 KIF15Q9NS87 1388 aa32.49■■■□□ 2.79
SRM-202ENST00000459997 CERKQ8TCT0 537 aa32.49■■■□□ 2.79
SRM-202ENST00000459997 MROH1Q8NDA8 1641 aa32.48■■■□□ 2.79
SRM-202ENST00000459997 TNRQ92752 1358 aa32.47■■■□□ 2.79
SRM-202ENST00000459997 ABCC3O15438 1527 aa32.47■■■□□ 2.79
SRM-202ENST00000459997 A2ML1A8K2U0 1454 aa32.47■■■□□ 2.79
SRM-202ENST00000459997 RRP7BPQ9NSQ0 103 aa32.45■■■□□ 2.79
SRM-202ENST00000459997 PLA2R1Q13018 1463 aa32.45■■■□□ 2.79
SRM-202ENST00000459997 ERBINQ96RT1 1412 aa32.43■■■□□ 2.78
SRM-202ENST00000459997 NCKAP5LQ9HCH0 1330 aa32.42■■■□□ 2.78
SRM-202ENST00000459997 CEP152O94986 1710 aa32.41■■■□□ 2.78
SRM-202ENST00000459997 CHIC2Q9UKJ5 165 aa32.39■■■□□ 2.78
SRM-202ENST00000459997 ANKRD30AQ9BXX3 1397 aa32.37■■■□□ 2.77
SRM-202ENST00000459997 PKD2Q13563 968 aa32.37■■■□□ 2.77
SRM-202ENST00000459997 FAM50AQ14320 339 aaKnown RBP32.37■■■□□ 2.77
SRM-202ENST00000459997 PRDM15P57071 1507 aaPredicted RBP32.36■■■□□ 2.77
SRM-202ENST00000459997 NLRP1Q9C000 1473 aa32.35■■■□□ 2.77
SRM-202ENST00000459997 DEPDC5O75140 1603 aa32.33■■■□□ 2.77
SRM-202ENST00000459997 SPATA31D1Q6ZQQ2 1576 aa32.32■■■□□ 2.77
SRM-202ENST00000459997 ERVK-7P63135 1459 aa32.3■■■□□ 2.76
SRM-202ENST00000459997 LTBP4Q8N2S1 1624 aa32.3■■■□□ 2.76
SRM-202ENST00000459997 ADGRL2O95490 1459 aa32.29■■■□□ 2.76
SRM-202ENST00000459997 UGGT1Q9NYU2 1555 aa32.28■■■□□ 2.76
SRM-202ENST00000459997 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.28■■■□□ 2.76
SRM-202ENST00000459997 POLR1AO95602 1720 aaPredicted RBP32.28■■■□□ 2.76
SRM-202ENST00000459997 KANK1Q14678 1352 aa32.24■■■□□ 2.75
SRM-202ENST00000459997 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.23■■■□□ 2.75
SRM-202ENST00000459997 THEMISQ8N1K5 641 aaPredicted RBP32.23■■■□□ 2.75
SRM-202ENST00000459997 CFAP65Q6ZU64 1925 aaKnown RBP32.22■■■□□ 2.75
SRM-202ENST00000459997 ARHGAP31Q2M1Z3 1444 aa32.22■■■□□ 2.75
SRM-202ENST00000459997 NEURL4Q96JN8 1562 aa32.21■■■□□ 2.75
SRM-202ENST00000459997 ZNF335Q9H4Z2 1342 aaPredicted RBP32.21■■■□□ 2.75
SRM-202ENST00000459997 VWDEQ8N2E2 1590 aa32.17■■■□□ 2.74
SRM-202ENST00000459997 ANKLE2Q86XL3 938 aa32.17■■■□□ 2.74
SRM-202ENST00000459997 PPARGC1BQ86YN6 1023 aaKnown RBP32.17■■■□□ 2.74
SRM-202ENST00000459997 LMTK2Q8IWU2 1503 aa32.16■■■□□ 2.74
SRM-202ENST00000459997 IQSEC2Q5JU85 1478 aa32.15■■■□□ 2.74
SRM-202ENST00000459997 ANKRD50Q9ULJ7 1429 aa32.14■■■□□ 2.74
SRM-202ENST00000459997 UBR1Q8IWV7 1749 aa32.12■■■□□ 2.73
SRM-202ENST00000459997 EFCAB6Q5THR3 1501 aa32.08■■■□□ 2.73
SRM-202ENST00000459997 MED14O60244 1454 aa32.08■■■□□ 2.73
SRM-202ENST00000459997 NPHP4O75161 1426 aaPredicted RBP32.08■■■□□ 2.73
SRM-202ENST00000459997 IQGAP1P46940 1657 aa32.05■■■□□ 2.72
SRM-202ENST00000459997 ROCK1Q13464 1354 aa32.04■■■□□ 2.72
SRM-202ENST00000459997 PIK3C2BO00750 1634 aa32.04■■■□□ 2.72
SRM-202ENST00000459997 ITGAEP38570 1179 aa32.01■■■□□ 2.71
SRM-202ENST00000459997 SYNMO15061 1565 aa32■■■□□ 2.71
SRM-202ENST00000459997 UNC13BO14795 1591 aa31.99■■■□□ 2.71
SRM-202ENST00000459997 SLIT1O75093 1534 aa31.98■■■□□ 2.71
SRM-202ENST00000459997 SCAF11Q99590 1463 aaKnown RBP31.97■■■□□ 2.71
SRM-202ENST00000459997 CPS1P31327 1500 aa31.97■■■□□ 2.71
SRM-202ENST00000459997 ARHGAP23Q9P227 1491 aa31.97■■■□□ 2.71
SRM-202ENST00000459997 TET3O43151 1660 aa31.96■■■□□ 2.71
SRM-202ENST00000459997 NOS1P29475 1434 aa31.96■■■□□ 2.71
SRM-202ENST00000459997 KDM5AP29375 1690 aaKnown RBP31.95■■■□□ 2.7
SRM-202ENST00000459997 STAG3Q9UJ98 1225 aa31.94■■■□□ 2.7
SRM-202ENST00000459997 RPRD2Q5VT52 1461 aaKnown RBP31.94■■■□□ 2.7
SRM-202ENST00000459997 IDI1Q13907 227 aa31.93■■■□□ 2.7
SRM-202ENST00000459997 GCC2Q8IWJ2 1684 aa31.92■■■□□ 2.7
SRM-202ENST00000459997 LTKP29376 864 aa31.91■■■□□ 2.7
SRM-202ENST00000459997 TXNDC2Q86VQ3 553 aa31.91■■■□□ 2.7
SRM-202ENST00000459997 UBAP1LF5GYI3 381 aa31.9■■■□□ 2.7
SRM-202ENST00000459997 EID1Q9Y6B2 187 aa31.89■■■□□ 2.7
SRM-202ENST00000459997 TMEM2Q9UHN6 1383 aa31.89■■■□□ 2.7
SRM-202ENST00000459997 ADGRB3O60242 1522 aa31.87■■■□□ 2.69
SRM-202ENST00000459997 RRBP1Q9P2E9 1410 aaKnown RBP31.87■■■□□ 2.69
SRM-202ENST00000459997 IQGAP3Q86VI3 1631 aa31.86■■■□□ 2.69
SRM-202ENST00000459997 SLC52A1Q9NWF4 448 aa31.85■■■□□ 2.69
SRM-202ENST00000459997 STRCP1A6NGW2 1772 aa31.84■■■□□ 2.69
SRM-202ENST00000459997 E9PCH4 1651 aa31.83■■■□□ 2.69
SRM-202ENST00000459997 NUP155O75694 1391 aa31.8■■■□□ 2.68
SRM-202ENST00000459997 MYO5BQ9ULV0 1848 aa31.74■■■□□ 2.67
SRM-202ENST00000459997 LRRC7Q96NW7 1537 aa31.74■■■□□ 2.67
SRM-202ENST00000459997 TMEM131LA2VDJ0 1609 aa31.72■■■□□ 2.67
SRM-202ENST00000459997 TOM1O60784 492 aa31.72■■■□□ 2.67
SRM-202ENST00000459997 SCAF1Q9H7N4 1312 aaKnown RBP31.7■■■□□ 2.66
SRM-202ENST00000459997 PIP4K2BP78356 416 aa31.68■■■□□ 2.66
SRM-202ENST00000459997 ZFYVE9O95405 1425 aa31.66■■■□□ 2.66
SRM-202ENST00000459997 NAIPQ13075 1403 aa31.66■■■□□ 2.66
SRM-202ENST00000459997 CHGAP10645 457 aaKnown RBP31.65■■■□□ 2.66
SRM-202ENST00000459997 RIMS2Q9UQ26 1411 aa31.65■■■□□ 2.66
SRM-202ENST00000459997 SLC26A8Q96RN1 970 aa31.64■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms