RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 EIF2AK4Q9P2K8 1649 aaKnown RBP24.99■■□□□ 1.59
COL7A1-203ENST00000459756 DUOX2Q9NRD8 1548 aa24.98■■□□□ 1.59
COL7A1-203ENST00000459756 PTPRKQ15262 1439 aa24.98■■□□□ 1.59
COL7A1-203ENST00000459756 RNF17Q9BXT8 1623 aaKnown RBP24.97■■□□□ 1.59
COL7A1-203ENST00000459756 WASHC2CQ9Y4E1 1318 aa24.96■■□□□ 1.59
COL7A1-203ENST00000459756 KIF15Q9NS87 1388 aa24.94■■□□□ 1.58
COL7A1-203ENST00000459756 RRP7BPQ9NSQ0 103 aa24.91■■□□□ 1.58
COL7A1-203ENST00000459756 STRCQ7RTU9 1775 aa24.9■■□□□ 1.58
COL7A1-203ENST00000459756 MYO3AQ8NEV4 1616 aa24.9■■□□□ 1.58
COL7A1-203ENST00000459756 PZPP20742 1482 aa24.9■■□□□ 1.58
COL7A1-203ENST00000459756 ERBINQ96RT1 1412 aa24.9■■□□□ 1.58
COL7A1-203ENST00000459756 FAM50AQ14320 339 aaKnown RBP24.9■■□□□ 1.58
COL7A1-203ENST00000459756 ANKRD30AQ9BXX3 1397 aa24.9■■□□□ 1.58
COL7A1-203ENST00000459756 ZC3H13Q5T200 1668 aaKnown RBP24.89■■□□□ 1.58
COL7A1-203ENST00000459756 DMRT2Q9Y5R5 561 aa24.88■■□□□ 1.57
COL7A1-203ENST00000459756 ZNF142P52746 1687 aaPredicted RBP24.88■■□□□ 1.57
COL7A1-203ENST00000459756 MROH1Q8NDA8 1641 aa24.87■■□□□ 1.57
COL7A1-203ENST00000459756 ABCC3O15438 1527 aa24.86■■□□□ 1.57
COL7A1-203ENST00000459756 CHIC2Q9UKJ5 165 aa24.86■■□□□ 1.57
COL7A1-203ENST00000459756 CEP170BQ9Y4F5 1589 aaPredicted RBP24.85■■□□□ 1.57
COL7A1-203ENST00000459756 NCOA1Q15788 1441 aa24.85■■□□□ 1.57
COL7A1-203ENST00000459756 ADGRL2O95490 1459 aa24.83■■□□□ 1.57
COL7A1-203ENST00000459756 TNRQ92752 1358 aa24.83■■□□□ 1.57
COL7A1-203ENST00000459756 FBXO31Q5XUX0 539 aaPredicted RBP24.83■■□□□ 1.57
COL7A1-203ENST00000459756 CAMSAP1Q5T5Y3 1602 aa24.83■■□□□ 1.56
COL7A1-203ENST00000459756 PRDM15P57071 1507 aaPredicted RBP24.82■■□□□ 1.56
COL7A1-203ENST00000459756 A2ML1A8K2U0 1454 aa24.81■■□□□ 1.56
COL7A1-203ENST00000459756 ILDR1Q86SU0 546 aaPredicted RBP24.8■■□□□ 1.56
COL7A1-203ENST00000459756 DEPDC5O75140 1603 aa24.79■■□□□ 1.56
COL7A1-203ENST00000459756 PTPRTO14522 1441 aa24.79■■□□□ 1.56
COL7A1-203ENST00000459756 CEP152O94986 1710 aa24.79■■□□□ 1.56
COL7A1-203ENST00000459756 PPARGC1BQ86YN6 1023 aaKnown RBP24.78■■□□□ 1.56
COL7A1-203ENST00000459756 PLA2R1Q13018 1463 aa24.77■■□□□ 1.56
COL7A1-203ENST00000459756 KANK1Q14678 1352 aa24.75■■□□□ 1.55
COL7A1-203ENST00000459756 NLRP1Q9C000 1473 aa24.75■■□□□ 1.55
COL7A1-203ENST00000459756 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.74■■□□□ 1.55
COL7A1-203ENST00000459756 SPATA31D1Q6ZQQ2 1576 aa24.74■■□□□ 1.55
COL7A1-203ENST00000459756 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.73■■□□□ 1.55
COL7A1-203ENST00000459756 ERVK-7P63135 1459 aa24.72■■□□□ 1.55
COL7A1-203ENST00000459756 ARHGAP31Q2M1Z3 1444 aa24.72■■□□□ 1.55
COL7A1-203ENST00000459756 PKD2Q13563 968 aa24.72■■□□□ 1.55
COL7A1-203ENST00000459756 ANKRD50Q9ULJ7 1429 aa24.7■■□□□ 1.55
COL7A1-203ENST00000459756 NCKAP5LQ9HCH0 1330 aa24.7■■□□□ 1.54
COL7A1-203ENST00000459756 ROCK1Q13464 1354 aa24.69■■□□□ 1.54
COL7A1-203ENST00000459756 VWDEQ8N2E2 1590 aa24.69■■□□□ 1.54
COL7A1-203ENST00000459756 FBXO41Q8TF61 875 aa24.68■■□□□ 1.54
COL7A1-203ENST00000459756 LMTK2Q8IWU2 1503 aa24.67■■□□□ 1.54
COL7A1-203ENST00000459756 CERKQ8TCT0 537 aa24.67■■□□□ 1.54
COL7A1-203ENST00000459756 CFAP65Q6ZU64 1925 aaKnown RBP24.66■■□□□ 1.54
COL7A1-203ENST00000459756 UGGT1Q9NYU2 1555 aa24.66■■□□□ 1.54
COL7A1-203ENST00000459756 THEMISQ8N1K5 641 aaPredicted RBP24.65■■□□□ 1.54
COL7A1-203ENST00000459756 ITGAEP38570 1179 aa24.62■■□□□ 1.53
COL7A1-203ENST00000459756 RRBP1Q9P2E9 1410 aaKnown RBP24.61■■□□□ 1.53
COL7A1-203ENST00000459756 POLR1AO95602 1720 aaPredicted RBP24.61■■□□□ 1.53
COL7A1-203ENST00000459756 EFCAB6Q5THR3 1501 aa24.6■■□□□ 1.53
COL7A1-203ENST00000459756 ANKLE2Q86XL3 938 aa24.59■■□□□ 1.53
COL7A1-203ENST00000459756 UNC13BO14795 1591 aa24.58■■□□□ 1.52
COL7A1-203ENST00000459756 LTBP4Q8N2S1 1624 aa24.57■■□□□ 1.52
COL7A1-203ENST00000459756 NEURL4Q96JN8 1562 aa24.56■■□□□ 1.52
COL7A1-203ENST00000459756 UBR1Q8IWV7 1749 aa24.55■■□□□ 1.52
COL7A1-203ENST00000459756 RPRD2Q5VT52 1461 aaKnown RBP24.54■■□□□ 1.52
COL7A1-203ENST00000459756 TET3O43151 1660 aa24.53■■□□□ 1.52
COL7A1-203ENST00000459756 NOS1P29475 1434 aa24.52■■□□□ 1.52
COL7A1-203ENST00000459756 MED14O60244 1454 aa24.51■■□□□ 1.51
COL7A1-203ENST00000459756 ZNF335Q9H4Z2 1342 aaPredicted RBP24.5■■□□□ 1.51
COL7A1-203ENST00000459756 SYNMO15061 1565 aa24.5■■□□□ 1.51
COL7A1-203ENST00000459756 PIK3C2BO00750 1634 aa24.5■■□□□ 1.51
COL7A1-203ENST00000459756 GCC2Q8IWJ2 1684 aa24.5■■□□□ 1.51
COL7A1-203ENST00000459756 NPHP4O75161 1426 aaPredicted RBP24.49■■□□□ 1.51
COL7A1-203ENST00000459756 KDM5AP29375 1690 aaKnown RBP24.48■■□□□ 1.51
COL7A1-203ENST00000459756 IQSEC2Q5JU85 1478 aa24.48■■□□□ 1.51
COL7A1-203ENST00000459756 IQGAP3Q86VI3 1631 aa24.47■■□□□ 1.51
COL7A1-203ENST00000459756 SLIT1O75093 1534 aa24.46■■□□□ 1.51
COL7A1-203ENST00000459756 ARHGAP23Q9P227 1491 aa24.46■■□□□ 1.51
COL7A1-203ENST00000459756 IDI1Q13907 227 aa24.46■■□□□ 1.51
COL7A1-203ENST00000459756 SLC52A1Q9NWF4 448 aa24.46■■□□□ 1.51
COL7A1-203ENST00000459756 IQGAP1P46940 1657 aa24.46■■□□□ 1.51
COL7A1-203ENST00000459756 STAG3Q9UJ98 1225 aa24.45■■□□□ 1.5
COL7A1-203ENST00000459756 NUP155O75694 1391 aa24.44■■□□□ 1.5
COL7A1-203ENST00000459756 SCAF11Q99590 1463 aaKnown RBP24.44■■□□□ 1.5
COL7A1-203ENST00000459756 TMEM2Q9UHN6 1383 aa24.42■■□□□ 1.5
COL7A1-203ENST00000459756 E9PCH4 1651 aa24.41■■□□□ 1.5
COL7A1-203ENST00000459756 TXNDC2Q86VQ3 553 aa24.41■■□□□ 1.5
COL7A1-203ENST00000459756 EID1Q9Y6B2 187 aa24.41■■□□□ 1.5
COL7A1-203ENST00000459756 NAIPQ13075 1403 aa24.4■■□□□ 1.5
COL7A1-203ENST00000459756 ADGRB3O60242 1522 aa24.4■■□□□ 1.5
COL7A1-203ENST00000459756 LTKP29376 864 aa24.39■■□□□ 1.49
COL7A1-203ENST00000459756 CPS1P31327 1500 aa24.38■■□□□ 1.49
COL7A1-203ENST00000459756 HFM1A2PYH4 1435 aa24.35■■□□□ 1.49
COL7A1-203ENST00000459756 TMEM131LA2VDJ0 1609 aa24.3■■□□□ 1.48
COL7A1-203ENST00000459756 MYO5BQ9ULV0 1848 aa24.28■■□□□ 1.48
COL7A1-203ENST00000459756 SPHKAPQ2M3C7 1700 aa24.25■■□□□ 1.47
COL7A1-203ENST00000459756 STRCP1A6NGW2 1772 aa24.25■■□□□ 1.47
COL7A1-203ENST00000459756 UBAP1LF5GYI3 381 aa24.25■■□□□ 1.47
COL7A1-203ENST00000459756 HDGFP51858 240 aaKnown RBP24.25■■□□□ 1.47
COL7A1-203ENST00000459756 ZFYVE9O95405 1425 aa24.25■■□□□ 1.47
COL7A1-203ENST00000459756 CHGAP10645 457 aaKnown RBP24.24■■□□□ 1.47
COL7A1-203ENST00000459756 RIMS2Q9UQ26 1411 aa24.23■■□□□ 1.47
COL7A1-203ENST00000459756 TRIM52Q96A61 297 aa24.21■■□□□ 1.47
COL7A1-203ENST00000459756 LRRC7Q96NW7 1537 aa24.2■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms