RNA–Protein interactions for RNA: ENST00000459706.1

DDX1-204, Transcript of DEAD-box helicase 1, humanhuman

TSL 3

Gene DDX1, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1-204ENST00000459706 MAP3K7O43318 606 aa10.43□□□□□ -0.74
DDX1-204ENST00000459706 PRIM1P49642 420 aaKnown RBP10.43□□□□□ -0.74
DDX1-204ENST00000459706 NPDC1Q9NQX5 325 aaPredicted RBP10.43□□□□□ -0.74
DDX1-204ENST00000459706 PCDHGA10Q9Y5H3 936 aa10.43□□□□□ -0.74
DDX1-204ENST00000459706 FECHP22830 423 aa10.42□□□□□ -0.74
DDX1-204ENST00000459706 PARP9Q8IXQ6 854 aa10.42□□□□□ -0.74
DDX1-204ENST00000459706 ZSWIM6Q9HCJ5 1215 aa10.42□□□□□ -0.74
DDX1-204ENST00000459706 DOK7Q18PE1 504 aa10.41□□□□□ -0.74
DDX1-204ENST00000459706 FAM117AQ9C073 453 aa10.41□□□□□ -0.74
DDX1-204ENST00000459706 RIMBP2O15034 1052 aa10.4□□□□□ -0.74
DDX1-204ENST00000459706 TTLL12Q14166 644 aaPredicted RBP10.39□□□□□ -0.75
DDX1-204ENST00000459706 RBM27Q9P2N5 1060 aaKnown RBP10.39□□□□□ -0.75
DDX1-204ENST00000459706 OATP04181 439 aa10.38□□□□□ -0.75
DDX1-204ENST00000459706 CLCN1P35523 988 aa10.38□□□□□ -0.75
DDX1-204ENST00000459706 FOSBP53539 338 aa10.38□□□□□ -0.75
DDX1-204ENST00000459706 PLEKHG3A1L390 1219 aa10.36□□□□□ -0.75
DDX1-204ENST00000459706 MAMSTRQ6ZN01 415 aa10.36□□□□□ -0.75
DDX1-204ENST00000459706 ZDHHC16Q969W1 377 aa10.36□□□□□ -0.75
DDX1-204ENST00000459706 ARXQ96QS3 562 aa10.36□□□□□ -0.75
DDX1-204ENST00000459706 PSDA5PKW4 1024 aaPredicted RBP10.35□□□□□ -0.75
DDX1-204ENST00000459706 RBM33Q96EV2 1170 aaKnown RBP10.35□□□□□ -0.75
DDX1-204ENST00000459706 TMUB1Q9BVT8 246 aa10.35□□□□□ -0.75
DDX1-204ENST00000459706 C6orf132Q5T0Z8 1188 aa10.34□□□□□ -0.75
DDX1-204ENST00000459706 GIGYF2Q6Y7W6 1299 aaKnown RBP10.34□□□□□ -0.75
DDX1-204ENST00000459706 CDHR5Q9HBB8 845 aa10.34□□□□□ -0.75
DDX1-204ENST00000459706 GPCPD1Q9NPB8 672 aa10.34□□□□□ -0.75
DDX1-204ENST00000459706 RSPH6AQ9H0K4 717 aa10.32□□□□□ -0.76
DDX1-204ENST00000459706 TSR1Q2NL82 804 aaKnown RBP10.31□□□□□ -0.76
DDX1-204ENST00000459706 SCUBE2Q9NQ36 999 aa10.31□□□□□ -0.76
DDX1-204ENST00000459706 FLIIQ13045 1269 aa10.3□□□□□ -0.76
DDX1-204ENST00000459706 ZNF454Q8N9F8 522 aa10.3□□□□□ -0.76
DDX1-204ENST00000459706 TTC13Q8NBP0 860 aa10.3□□□□□ -0.76
DDX1-204ENST00000459706 ZMYND15Q9H091 742 aa10.29□□□□□ -0.76
DDX1-204ENST00000459706 HOXB3P14651 431 aaPredicted RBP10.28□□□□□ -0.76
DDX1-204ENST00000459706 GPR153Q6NV75 609 aa10.28□□□□□ -0.76
DDX1-204ENST00000459706 PCMTD1Q96MG8 357 aaPredicted RBP10.28□□□□□ -0.76
DDX1-204ENST00000459706 SCRIBQ14160 1630 aa10.27□□□□□ -0.77
DDX1-204ENST00000459706 SNPHO15079 494 aa10.27□□□□□ -0.77
DDX1-204ENST00000459706 METTL3Q86U44 580 aaKnown RBP10.27□□□□□ -0.77
DDX1-204ENST00000459706 ZNF710Q8N1W2 664 aa10.27□□□□□ -0.77
DDX1-204ENST00000459706 NUDT7P0C024 238 aa10.26□□□□□ -0.77
DDX1-204ENST00000459706 MS4A1P11836 297 aa10.26□□□□□ -0.77
DDX1-204ENST00000459706 SSTR3P32745 418 aaPredicted RBP10.26□□□□□ -0.77
DDX1-204ENST00000459706 PRSS12P56730 875 aa10.26□□□□□ -0.77
DDX1-204ENST00000459706 ARSIQ5FYB1 569 aa10.26□□□□□ -0.77
DDX1-204ENST00000459706 SH3D19Q5HYK7 790 aa10.26□□□□□ -0.77
DDX1-204ENST00000459706 PXYLP1Q8TE99 480 aa10.26□□□□□ -0.77
DDX1-204ENST00000459706 ADGRG1Q9Y653 693 aa10.26□□□□□ -0.77
DDX1-204ENST00000459706 MDM2Q00987 491 aaPredicted RBP10.25□□□□□ -0.77
DDX1-204ENST00000459706 DIXDC1Q155Q3 683 aa10.25□□□□□ -0.77
DDX1-204ENST00000459706 RBM46Q8TBY0 533 aaKnown RBP10.25□□□□□ -0.77
DDX1-204ENST00000459706 REPIN1Q9BWE0 567 aaKnown RBP10.25□□□□□ -0.77
DDX1-204ENST00000459706 SKIV2LQ15477 1246 aaKnown RBP10.24□□□□□ -0.77
DDX1-204ENST00000459706 PPP4R3BQ5MIZ7 849 aa10.24□□□□□ -0.77
DDX1-204ENST00000459706 PADI6Q6TGC4 694 aa10.24□□□□□ -0.77
DDX1-204ENST00000459706 UNC13AQ9UPW8 1703 aa10.24□□□□□ -0.77
DDX1-204ENST00000459706 ADAM33Q9BZ11 813 aa10.23□□□□□ -0.77
DDX1-204ENST00000459706 FAM217BQ9NTX9 383 aaPredicted RBP10.23□□□□□ -0.77
DDX1-204ENST00000459706 CDCA7LQ96GN5 454 aa10.22□□□□□ -0.77
DDX1-204ENST00000459706 PHOX2BQ99453 314 aa10.22□□□□□ -0.77
DDX1-204ENST00000459706 BCL2L12Q9HB09 334 aa10.22□□□□□ -0.77
DDX1-204ENST00000459706 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.21□□□□□ -0.77
DDX1-204ENST00000459706 POTEJP0CG39 1038 aa10.21□□□□□ -0.77
DDX1-204ENST00000459706 ONECUT3O60422 494 aaPredicted RBP10.2□□□□□ -0.78
DDX1-204ENST00000459706 SHROOM4Q9ULL8 1493 aa10.19□□□□□ -0.78
DDX1-204ENST00000459706 BEGAINQ9BUH8 593 aa10.19□□□□□ -0.78
DDX1-204ENST00000459706 PTPREP23469 700 aa10.18□□□□□ -0.78
DDX1-204ENST00000459706 LHX6Q9UPM6 363 aa10.18□□□□□ -0.78
DDX1-204ENST00000459706 PPP1R3GB7ZBB8 358 aa10.17□□□□□ -0.78
DDX1-204ENST00000459706 HOMEZQ8IX15 550 aa10.17□□□□□ -0.78
DDX1-204ENST00000459706 KHSRPQ92945 711 aaKnown RBP eCLIP10.17□□□□□ -0.78
DDX1-204ENST00000459706 POTEB2H3BUK9 544 aa10.16□□□□□ -0.78
DDX1-204ENST00000459706 HOXB1P14653 301 aaPredicted RBP10.16□□□□□ -0.78
DDX1-204ENST00000459706 LHX8Q68G74 356 aa10.16□□□□□ -0.78
DDX1-204ENST00000459706 SULF1Q8IWU6 871 aa10.15□□□□□ -0.78
DDX1-204ENST00000459706 SUPT5HO00267 1087 aaKnown RBP10.14□□□□□ -0.79
DDX1-204ENST00000459706 PACS2Q86VP3 889 aa10.14□□□□□ -0.79
DDX1-204ENST00000459706 EYA1Q99502 592 aa10.14□□□□□ -0.79
DDX1-204ENST00000459706 NBPF26B4DH59 902 aa10.13□□□□□ -0.79
DDX1-204ENST00000459706 FAM161AQ3B820 660 aa10.13□□□□□ -0.79
DDX1-204ENST00000459706 KCNH8Q96L42 1107 aa10.13□□□□□ -0.79
DDX1-204ENST00000459706 RCCD1A6NED2 376 aa10.11□□□□□ -0.79
DDX1-204ENST00000459706 A6NJR5 290 aa10.11□□□□□ -0.79
DDX1-204ENST00000459706 DNAJB2P25686 324 aa10.11□□□□□ -0.79
DDX1-204ENST00000459706 TUSC1Q2TAM9 212 aa10.11□□□□□ -0.79
DDX1-204ENST00000459706 TRIM6-TRIM34B2RNG4 842 aa10.1□□□□□ -0.79
DDX1-204ENST00000459706 GJA5P36382 358 aa10.1□□□□□ -0.79
DDX1-204ENST00000459706 MYSM1Q5VVJ2 828 aa10.1□□□□□ -0.79
DDX1-204ENST00000459706 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.1□□□□□ -0.79
DDX1-204ENST00000459706 COL9A1P20849 921 aa10.09□□□□□ -0.79
DDX1-204ENST00000459706 BICRAQ9NZM4 1560 aa10.09□□□□□ -0.79
DDX1-204ENST00000459706 RSPH4AQ5TD94 716 aa10.08□□□□□ -0.8
DDX1-204ENST00000459706 BANK1Q8NDB2 785 aa10.08□□□□□ -0.8
DDX1-204ENST00000459706 TATDN2Q93075 761 aa10.08□□□□□ -0.8
DDX1-204ENST00000459706 TBC1D2Q9BYX2 928 aa10.08□□□□□ -0.8
DDX1-204ENST00000459706 FAM198AQ9UFP1 575 aa10.08□□□□□ -0.8
DDX1-204ENST00000459706 TSKSQ9UJT2 592 aa10.08□□□□□ -0.8
DDX1-204ENST00000459706 CD46P15529 392 aa10.07□□□□□ -0.8
DDX1-204ENST00000459706 CLK2P49760 499 aaKnown RBP10.07□□□□□ -0.8
DDX1-204ENST00000459706 NUDT18Q6ZVK8 323 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms