RNA–Protein interactions for RNA: ENST00000459645.1

RGPD6-206, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

TSL 3

Gene RGPD6, Length 477 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-206ENST00000459645 ARHGAP5Q13017 1502 aa6.91□□□□□ -1.3
RGPD6-206ENST00000459645 POLR1AO95602 1720 aaPredicted RBP6.91□□□□□ -1.3
RGPD6-206ENST00000459645 MEX3CQ5U5Q3 659 aaKnown RBP6.91□□□□□ -1.3
RGPD6-206ENST00000459645 RGS12O14924 1447 aa6.91□□□□□ -1.3
RGPD6-206ENST00000459645 SYNMO15061 1565 aa6.91□□□□□ -1.3
RGPD6-206ENST00000459645 NUTM2BA6NNL0 878 aaPredicted RBP6.9□□□□□ -1.3
RGPD6-206ENST00000459645 NUTM2EB1AL46 878 aaPredicted RBP6.9□□□□□ -1.3
RGPD6-206ENST00000459645 NUTM2DQ5VT03 806 aaPredicted RBP6.9□□□□□ -1.3
RGPD6-206ENST00000459645 NUTM2AQ8IVF1 878 aaPredicted RBP6.9□□□□□ -1.3
RGPD6-206ENST00000459645 THEMISQ8N1K5 641 aaPredicted RBP6.9□□□□□ -1.3
RGPD6-206ENST00000459645 KIDINS220Q9ULH0 1771 aa6.89□□□□□ -1.31
RGPD6-206ENST00000459645 EP400Q96L91 3159 aa6.89□□□□□ -1.31
RGPD6-206ENST00000459645 ROBO1Q9Y6N7 1651 aa6.88□□□□□ -1.31
RGPD6-206ENST00000459645 TMEM94Q12767 1356 aa6.88□□□□□ -1.31
RGPD6-206ENST00000459645 IQGAP1P46940 1657 aa6.87□□□□□ -1.31
RGPD6-206ENST00000459645 DEPDC5O75140 1603 aa6.87□□□□□ -1.31
RGPD6-206ENST00000459645 KIF14Q15058 1648 aa6.87□□□□□ -1.31
RGPD6-206ENST00000459645 SPATA31A6Q5VVP1 1343 aa6.87□□□□□ -1.31
RGPD6-206ENST00000459645 MYO5CQ9NQX4 1742 aa6.87□□□□□ -1.31
RGPD6-206ENST00000459645 SPAG9O60271 1321 aaKnown RBP6.86□□□□□ -1.31
RGPD6-206ENST00000459645 AFF2P51816 1311 aa6.86□□□□□ -1.31
RGPD6-206ENST00000459645 FAM135AQ9P2D6 1515 aa6.86□□□□□ -1.31
RGPD6-206ENST00000459645 MIA2Q96PC5 1412 aa6.85□□□□□ -1.31
RGPD6-206ENST00000459645 ITSN2Q9NZM3 1697 aa6.85□□□□□ -1.31
RGPD6-206ENST00000459645 FOXD1Q16676 465 aa6.85□□□□□ -1.31
RGPD6-206ENST00000459645 SLAIN2Q9P270 581 aa6.85□□□□□ -1.31
RGPD6-206ENST00000459645 PLXNC1O60486 1568 aa6.85□□□□□ -1.31
RGPD6-206ENST00000459645 SAMD9LQ8IVG5 1584 aa6.85□□□□□ -1.31
RGPD6-206ENST00000459645 UGGT1Q9NYU2 1555 aa6.85□□□□□ -1.31
RGPD6-206ENST00000459645 KDM5DQ9BY66 1539 aa6.85□□□□□ -1.31
RGPD6-206ENST00000459645 XIRP1Q702N8 1843 aaKnown RBP6.85□□□□□ -1.31
RGPD6-206ENST00000459645 A2MP01023 1474 aa6.85□□□□□ -1.31
RGPD6-206ENST00000459645 ATAD2Q6PL18 1390 aa6.84□□□□□ -1.31
RGPD6-206ENST00000459645 YY1P25490 414 aa6.84□□□□□ -1.31
RGPD6-206ENST00000459645 RBM6P78332 1123 aaKnown RBP6.84□□□□□ -1.31
RGPD6-206ENST00000459645 QTRT2Q9H974 415 aaKnown RBP6.84□□□□□ -1.31
RGPD6-206ENST00000459645 ATP1B4Q9UN42 357 aaPredicted RBP6.84□□□□□ -1.31
RGPD6-206ENST00000459645 COL16A1Q07092 1604 aaPredicted RBP6.83□□□□□ -1.32
RGPD6-206ENST00000459645 MAP3K1Q13233 1512 aa6.83□□□□□ -1.32
RGPD6-206ENST00000459645 LTKP29376 864 aa6.83□□□□□ -1.32
RGPD6-206ENST00000459645 HNRNPMP52272 730 aaKnown RBP eCLIP6.83□□□□□ -1.32
RGPD6-206ENST00000459645 PZPP20742 1482 aa6.83□□□□□ -1.32
RGPD6-206ENST00000459645 NLRP1Q9C000 1473 aa6.83□□□□□ -1.32
RGPD6-206ENST00000459645 TROQ12816 1431 aaPredicted RBP6.83□□□□□ -1.32
RGPD6-206ENST00000459645 ATP7AQ04656 1500 aa6.82□□□□□ -1.32
RGPD6-206ENST00000459645 PHLPP1O60346 1717 aa6.82□□□□□ -1.32
RGPD6-206ENST00000459645 CEP350Q5VT06 3117 aa6.82□□□□□ -1.32
RGPD6-206ENST00000459645 ZC3H13Q5T200 1668 aaKnown RBP6.82□□□□□ -1.32
RGPD6-206ENST00000459645 LRRC9Q6ZRR7 1453 aa6.82□□□□□ -1.32
RGPD6-206ENST00000459645 EIF5BO60841 1220 aaKnown RBP6.82□□□□□ -1.32
RGPD6-206ENST00000459645 AMER1Q5JTC6 1135 aaPredicted RBP6.82□□□□□ -1.32
RGPD6-206ENST00000459645 PROSER2Q86WR7 435 aaPredicted RBP6.82□□□□□ -1.32
RGPD6-206ENST00000459645 FGD6Q6ZV73 1430 aa6.82□□□□□ -1.32
RGPD6-206ENST00000459645 ZNF777Q9ULD5 760 aaPredicted RBP6.81□□□□□ -1.32
RGPD6-206ENST00000459645 CDK11AQ9UQ88 783 aaPredicted RBP6.81□□□□□ -1.32
RGPD6-206ENST00000459645 SCAF11Q99590 1463 aaKnown RBP6.8□□□□□ -1.32
RGPD6-206ENST00000459645 LRP5O75197 1615 aa6.8□□□□□ -1.32
RGPD6-206ENST00000459645 C8orf37Q96NL8 207 aa6.8□□□□□ -1.32
RGPD6-206ENST00000459645 CDC42BPBQ9Y5S2 1711 aa6.8□□□□□ -1.32
RGPD6-206ENST00000459645 KCNA6P17658 529 aa6.79□□□□□ -1.32
RGPD6-206ENST00000459645 TXNDC2Q86VQ3 553 aa6.79□□□□□ -1.32
RGPD6-206ENST00000459645 SYCP2Q9BX26 1530 aa6.79□□□□□ -1.32
RGPD6-206ENST00000459645 CLIP1P30622 1438 aa6.78□□□□□ -1.32
RGPD6-206ENST00000459645 SENP3-EIF4A1A0A087X0R7 540 aa6.78□□□□□ -1.32
RGPD6-206ENST00000459645 PSDA5PKW4 1024 aaPredicted RBP6.78□□□□□ -1.32
RGPD6-206ENST00000459645 HRCP23327 699 aa6.78□□□□□ -1.32
RGPD6-206ENST00000459645 DEFB132Q7Z7B7 95 aa6.78□□□□□ -1.32
RGPD6-206ENST00000459645 MSH6P52701 1360 aa6.78□□□□□ -1.32
RGPD6-206ENST00000459645 WASHC2CQ9Y4E1 1318 aa6.77□□□□□ -1.32
RGPD6-206ENST00000459645 PREX2Q70Z35 1606 aa6.77□□□□□ -1.33
RGPD6-206ENST00000459645 KIF3BO15066 747 aa6.77□□□□□ -1.33
RGPD6-206ENST00000459645 CCDC125Q86Z20 511 aa6.77□□□□□ -1.33
RGPD6-206ENST00000459645 NGLY1Q96IV0 654 aa6.77□□□□□ -1.33
RGPD6-206ENST00000459645 NCOA2Q15596 1464 aa6.77□□□□□ -1.33
RGPD6-206ENST00000459645 INO80Q9ULG1 1556 aaPredicted RBP6.77□□□□□ -1.33
RGPD6-206ENST00000459645 PRDM15P57071 1507 aaPredicted RBP6.76□□□□□ -1.33
RGPD6-206ENST00000459645 SLC26A8Q96RN1 970 aa6.76□□□□□ -1.33
RGPD6-206ENST00000459645 ARHGAP23Q9P227 1491 aa6.76□□□□□ -1.33
RGPD6-206ENST00000459645 TIAM1Q13009 1591 aa6.75□□□□□ -1.33
RGPD6-206ENST00000459645 DHX29Q7Z478 1369 aaKnown RBP6.75□□□□□ -1.33
RGPD6-206ENST00000459645 SHPRHQ149N8 1683 aa6.74□□□□□ -1.33
RGPD6-206ENST00000459645 DIP2AQ14689 1571 aa6.74□□□□□ -1.33
RGPD6-206ENST00000459645 NWD1Q149M9 1564 aa6.74□□□□□ -1.33
RGPD6-206ENST00000459645 BCL9LQ86UU0 1499 aa6.73□□□□□ -1.33
RGPD6-206ENST00000459645 NHSL1Q5SYE7 1610 aa6.73□□□□□ -1.33
RGPD6-206ENST00000459645 AHDC1Q5TGY3 1603 aaPredicted RBP6.73□□□□□ -1.33
RGPD6-206ENST00000459645 SLIT1O75093 1534 aa6.73□□□□□ -1.33
RGPD6-206ENST00000459645 ADAMTS2O95450 1211 aa6.73□□□□□ -1.33
RGPD6-206ENST00000459645 EID1Q9Y6B2 187 aa6.73□□□□□ -1.33
RGPD6-206ENST00000459645 KIAA1107Q9UPP5 1409 aa6.73□□□□□ -1.33
RGPD6-206ENST00000459645 ERVK-7P63135 1459 aa6.73□□□□□ -1.33
RGPD6-206ENST00000459645 BRINP3Q76B58 766 aa6.72□□□□□ -1.33
RGPD6-206ENST00000459645 CSRNP3Q8WYN3 585 aa6.72□□□□□ -1.33
RGPD6-206ENST00000459645 BLMP54132 1417 aaPredicted RBP6.72□□□□□ -1.33
RGPD6-206ENST00000459645 ZNF644Q9H582 1327 aaPredicted RBP6.72□□□□□ -1.33
RGPD6-206ENST00000459645 NKTRP30414 1462 aaKnown RBP6.72□□□□□ -1.33
RGPD6-206ENST00000459645 MAST1Q9Y2H9 1570 aa6.71□□□□□ -1.34
RGPD6-206ENST00000459645 USP21Q9UK80 565 aa6.71□□□□□ -1.34
RGPD6-206ENST00000459645 ABCC3O15438 1527 aa6.71□□□□□ -1.34
RGPD6-206ENST00000459645 GPATCH8Q9UKJ3 1502 aaKnown RBP6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms