RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 DHX29Q7Z478 1369 aaKnown RBP35.48■■■■□ 3.27
U2AF1-204ENST00000459639 ANKRD30BQ9BXX2 1392 aa35.48■■■■□ 3.27
U2AF1-204ENST00000459639 ZMYM4Q5VZL5 1548 aa35.46■■■■□ 3.27
U2AF1-204ENST00000459639 A2MP01023 1474 aa35.43■■■■□ 3.26
U2AF1-204ENST00000459639 RAPGEF3O95398 923 aa35.43■■■■□ 3.26
U2AF1-204ENST00000459639 PKD2Q13563 968 aa35.41■■■■□ 3.26
U2AF1-204ENST00000459639 FOXD1Q16676 465 aa35.41■■■■□ 3.26
U2AF1-204ENST00000459639 DNAJC5Q9H3Z4 198 aa35.4■■■■□ 3.26
U2AF1-204ENST00000459639 DIP2CQ9Y2E4 1556 aa35.4■■■■□ 3.26
U2AF1-204ENST00000459639 BCORL1Q5H9F3 1711 aa35.4■■■■□ 3.26
U2AF1-204ENST00000459639 TONSLQ96HA7 1378 aa35.37■■■■□ 3.25
U2AF1-204ENST00000459639 PRDM15P57071 1507 aaPredicted RBP35.37■■■■□ 3.25
U2AF1-204ENST00000459639 RNF17Q9BXT8 1623 aaKnown RBP35.36■■■■□ 3.25
U2AF1-204ENST00000459639 RPRD2Q5VT52 1461 aaKnown RBP35.35■■■■□ 3.25
U2AF1-204ENST00000459639 MROH1Q8NDA8 1641 aa35.34■■■■□ 3.25
U2AF1-204ENST00000459639 VWDEQ8N2E2 1590 aa35.34■■■■□ 3.25
U2AF1-204ENST00000459639 GRWD1Q9BQ67 446 aaKnown RBP eCLIP35.33■■■■□ 3.25
U2AF1-204ENST00000459639 TET3O43151 1660 aa35.28■■■■□ 3.24
U2AF1-204ENST00000459639 KIF3BO15066 747 aa35.27■■■■□ 3.24
U2AF1-204ENST00000459639 KANK1Q14678 1352 aa35.26■■■■□ 3.24
U2AF1-204ENST00000459639 YEATS2Q9ULM3 1422 aa35.25■■■■□ 3.23
U2AF1-204ENST00000459639 E9PCH4 1651 aa35.22■■■■□ 3.23
U2AF1-204ENST00000459639 PPP1R15AO75807 674 aaPredicted RBP35.2■■■■□ 3.23
U2AF1-204ENST00000459639 REREQ9P2R6 1566 aa35.19■■■■□ 3.22
U2AF1-204ENST00000459639 COL17A1Q9UMD9 1497 aaPredicted RBP35.18■■■■□ 3.22
U2AF1-204ENST00000459639 LMTK2Q8IWU2 1503 aa35.17■■■■□ 3.22
U2AF1-204ENST00000459639 ATP10AO60312 1499 aa35.17■■■■□ 3.22
U2AF1-204ENST00000459639 CEP152O94986 1710 aa35.15■■■■□ 3.22
U2AF1-204ENST00000459639 ARHGEF40Q8TER5 1519 aa35.13■■■■□ 3.21
U2AF1-204ENST00000459639 PLA2R1Q13018 1463 aa35.12■■■■□ 3.21
U2AF1-204ENST00000459639 EFCAB6Q5THR3 1501 aa35.11■■■■□ 3.21
U2AF1-204ENST00000459639 SPHKAPQ2M3C7 1700 aa35.11■■■■□ 3.21
U2AF1-204ENST00000459639 CCDC144AA2RUR9 1427 aa35.08■■■■□ 3.21
U2AF1-204ENST00000459639 ZC3H13Q5T200 1668 aaKnown RBP35.07■■■■□ 3.2
U2AF1-204ENST00000459639 L3MBTL2Q969R5 705 aa35.06■■■■□ 3.2
U2AF1-204ENST00000459639 AGLP35573 1532 aa35.06■■■■□ 3.2
U2AF1-204ENST00000459639 TRPM2O94759 1503 aa35.05■■■■□ 3.2
U2AF1-204ENST00000459639 ZNF316A6NFI3 1004 aaPredicted RBP35.05■■■■□ 3.2
U2AF1-204ENST00000459639 ABCC3O15438 1527 aa35.03■■■■□ 3.2
U2AF1-204ENST00000459639 PTPRTO14522 1441 aa35.02■■■■□ 3.2
U2AF1-204ENST00000459639 TRHP20396 242 aaPredicted RBP35.01■■■■□ 3.19
U2AF1-204ENST00000459639 CAMSAP1Q5T5Y3 1602 aa34.99■■■■□ 3.19
U2AF1-204ENST00000459639 GGT6Q6P531 493 aa34.99■■■■□ 3.19
U2AF1-204ENST00000459639 SIGLEC1Q9BZZ2 1709 aa34.94■■■■□ 3.18
U2AF1-204ENST00000459639 CLTCL1P53675 1640 aa34.91■■■■□ 3.18
U2AF1-204ENST00000459639 WASHC2CQ9Y4E1 1318 aa34.9■■■■□ 3.18
U2AF1-204ENST00000459639 NPATQ14207 1427 aa34.88■■■■□ 3.17
U2AF1-204ENST00000459639 ARHGAP31Q2M1Z3 1444 aa34.85■■■■□ 3.17
U2AF1-204ENST00000459639 NEURL4Q96JN8 1562 aa34.84■■■■□ 3.17
U2AF1-204ENST00000459639 UHRF1BP1Q6BDS2 1440 aa34.84■■■■□ 3.17
U2AF1-204ENST00000459639 SPATA31E1Q6ZUB1 1445 aa34.81■■■■□ 3.16
U2AF1-204ENST00000459639 PPP6R1Q9UPN7 881 aa34.81■■■■□ 3.16
U2AF1-204ENST00000459639 CNTLNQ9NXG0 1405 aa34.8■■■■□ 3.16
U2AF1-204ENST00000459639 KIF1BO60333 1816 aa34.8■■■■□ 3.16
U2AF1-204ENST00000459639 NBPF8Q3BBV2 869 aa34.78■■■■□ 3.16
U2AF1-204ENST00000459639 CFAP65Q6ZU64 1925 aaKnown RBP34.77■■■■□ 3.16
U2AF1-204ENST00000459639 UGGT1Q9NYU2 1555 aa34.74■■■■□ 3.15
U2AF1-204ENST00000459639 NOS1P29475 1434 aa34.74■■■■□ 3.15
U2AF1-204ENST00000459639 CLTCQ00610 1675 aaKnown RBP34.74■■■■□ 3.15
U2AF1-204ENST00000459639 DCAF11Q8TEB1 546 aa34.71■■■■□ 3.15
U2AF1-204ENST00000459639 PREX1Q8TCU6 1659 aa34.71■■■■□ 3.15
U2AF1-204ENST00000459639 RALGAPBQ86X10 1494 aa34.7■■■■□ 3.14
U2AF1-204ENST00000459639 PIK3C2BO00750 1634 aa34.69■■■■□ 3.14
U2AF1-204ENST00000459639 SYNMO15061 1565 aa34.69■■■■□ 3.14
U2AF1-204ENST00000459639 RGL3Q3MIN7 710 aa34.68■■■■□ 3.14
U2AF1-204ENST00000459639 MROH2AA6NES4 1674 aa34.66■■■■□ 3.14
U2AF1-204ENST00000459639 PRAG1Q86YV5 1406 aa34.65■■■■□ 3.14
U2AF1-204ENST00000459639 ADGRB3O60242 1522 aa34.65■■■■□ 3.14
U2AF1-204ENST00000459639 TRPM1Q7Z4N2 1603 aa34.64■■■■□ 3.14
U2AF1-204ENST00000459639 KDM2AQ9Y2K7 1162 aa34.63■■■■□ 3.13
U2AF1-204ENST00000459639 ZNF326Q5BKZ1 582 aaKnown RBP34.62■■■■□ 3.13
U2AF1-204ENST00000459639 IFT172Q9UG01 1749 aa34.62■■■■□ 3.13
U2AF1-204ENST00000459639 DIEXFQ68CQ4 756 aaKnown RBP34.61■■■■□ 3.13
U2AF1-204ENST00000459639 STAC3Q96MF2 364 aa34.6■■■■□ 3.13
U2AF1-204ENST00000459639 MADDQ8WXG6 1647 aa34.58■■■■□ 3.13
U2AF1-204ENST00000459639 MLECQ14165 292 aa34.57■■■■□ 3.13
U2AF1-204ENST00000459639 ERVK-7P63135 1459 aa34.57■■■■□ 3.12
U2AF1-204ENST00000459639 EIF4G2P78344 907 aaKnown RBP eCLIP34.57■■■■□ 3.12
U2AF1-204ENST00000459639 ARID4BQ4LE39 1312 aaPredicted RBP34.54■■■■□ 3.12
U2AF1-204ENST00000459639 SPATA31D1Q6ZQQ2 1576 aa34.53■■■■□ 3.12
U2AF1-204ENST00000459639 MYOM2P54296 1465 aa34.53■■■■□ 3.12
U2AF1-204ENST00000459639 LAMC1P11047 1609 aa34.53■■■■□ 3.12
U2AF1-204ENST00000459639 HSPA5P11021 654 aaKnown RBP34.51■■■■□ 3.12
U2AF1-204ENST00000459639 PPLO60437 1756 aa34.5■■■■□ 3.11
U2AF1-204ENST00000459639 SLC52A1Q9NWF4 448 aa34.49■■■■□ 3.11
U2AF1-204ENST00000459639 ESF1Q9H501 851 aaKnown RBP34.48■■■■□ 3.11
U2AF1-204ENST00000459639 HIRIP3Q9BW71 556 aaPredicted RBP34.47■■■■□ 3.11
U2AF1-204ENST00000459639 KIAA1210Q9ULL0 1709 aa34.46■■■■□ 3.11
U2AF1-204ENST00000459639 ROCK2O75116 1388 aaKnown RBP34.45■■■■□ 3.11
U2AF1-204ENST00000459639 GPRASP1Q5JY77 1395 aa34.45■■■■□ 3.11
U2AF1-204ENST00000459639 USP47Q96K76 1375 aa34.44■■■■□ 3.1
U2AF1-204ENST00000459639 TMEM131LA2VDJ0 1609 aa34.43■■■■□ 3.1
U2AF1-204ENST00000459639 ZMYM3Q14202 1370 aa34.42■■■■□ 3.1
U2AF1-204ENST00000459639 FER1L4A9Z1Z3 1794 aa34.42■■■■□ 3.1
U2AF1-204ENST00000459639 POLR1AO95602 1720 aaPredicted RBP34.42■■■■□ 3.1
U2AF1-204ENST00000459639 FBXO31Q5XUX0 539 aaPredicted RBP34.41■■■■□ 3.1
U2AF1-204ENST00000459639 CARD11Q9BXL7 1154 aa34.41■■■■□ 3.1
U2AF1-204ENST00000459639 NRXN1Q9ULB1 1477 aa34.41■■■■□ 3.1
U2AF1-204ENST00000459639 RPGRIP1LQ68CZ1 1315 aa34.4■■■■□ 3.1
U2AF1-204ENST00000459639 MYO5BQ9ULV0 1848 aa34.4■■■■□ 3.1
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms