RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 TONSLQ96HA7 1378 aa8.38□□□□□ -1.07
RNU1-88P-201ENST00000459274 POGZQ7Z3K3 1410 aa8.37□□□□□ -1.07
RNU1-88P-201ENST00000459274 RAPGEF3O95398 923 aa8.37□□□□□ -1.07
RNU1-88P-201ENST00000459274 MAGI2Q86UL8 1455 aa8.37□□□□□ -1.07
RNU1-88P-201ENST00000459274 DHX29Q7Z478 1369 aaKnown RBP8.36□□□□□ -1.07
RNU1-88P-201ENST00000459274 ARHGEF12Q9NZN5 1544 aa8.36□□□□□ -1.07
RNU1-88P-201ENST00000459274 PKD2Q13563 968 aa8.36□□□□□ -1.07
RNU1-88P-201ENST00000459274 MLH3Q9UHC1 1453 aa8.36□□□□□ -1.07
RNU1-88P-201ENST00000459274 EIF2AK4Q9P2K8 1649 aaKnown RBP8.36□□□□□ -1.07
RNU1-88P-201ENST00000459274 INO80Q9ULG1 1556 aaPredicted RBP8.35□□□□□ -1.07
RNU1-88P-201ENST00000459274 ARID4BQ4LE39 1312 aaPredicted RBP8.35□□□□□ -1.07
RNU1-88P-201ENST00000459274 A2MP01023 1474 aa8.35□□□□□ -1.07
RNU1-88P-201ENST00000459274 GGT6Q6P531 493 aa8.35□□□□□ -1.07
RNU1-88P-201ENST00000459274 KIDINS220Q9ULH0 1771 aa8.35□□□□□ -1.07
RNU1-88P-201ENST00000459274 RICTORQ6R327 1708 aa8.34□□□□□ -1.07
RNU1-88P-201ENST00000459274 ZFYVE16Q7Z3T8 1539 aa8.34□□□□□ -1.07
RNU1-88P-201ENST00000459274 WASHC2CQ9Y4E1 1318 aa8.34□□□□□ -1.07
RNU1-88P-201ENST00000459274 KDM5CP41229 1560 aa8.34□□□□□ -1.07
RNU1-88P-201ENST00000459274 KDM6BO15054 1643 aa8.32□□□□□ -1.08
RNU1-88P-201ENST00000459274 ATP10AO60312 1499 aa8.32□□□□□ -1.08
RNU1-88P-201ENST00000459274 UNC13BO14795 1591 aa8.31□□□□□ -1.08
RNU1-88P-201ENST00000459274 CFAP65Q6ZU64 1925 aaKnown RBP8.31□□□□□ -1.08
RNU1-88P-201ENST00000459274 FAM135AQ9P2D6 1515 aa8.31□□□□□ -1.08
RNU1-88P-201ENST00000459274 ADRA2BP18089 450 aa8.31□□□□□ -1.08
RNU1-88P-201ENST00000459274 PPRC1Q5VV67 1664 aaKnown RBP8.3□□□□□ -1.08
RNU1-88P-201ENST00000459274 CCDC144AA2RUR9 1427 aa8.3□□□□□ -1.08
RNU1-88P-201ENST00000459274 KDM5DQ9BY66 1539 aa8.3□□□□□ -1.08
RNU1-88P-201ENST00000459274 IQGAP3Q86VI3 1631 aa8.3□□□□□ -1.08
RNU1-88P-201ENST00000459274 SIN3AQ96ST3 1273 aa8.3□□□□□ -1.08
RNU1-88P-201ENST00000459274 ZMYM4Q5VZL5 1548 aa8.29□□□□□ -1.08
RNU1-88P-201ENST00000459274 TET3O43151 1660 aa8.28□□□□□ -1.08
RNU1-88P-201ENST00000459274 STAC3Q96MF2 364 aa8.28□□□□□ -1.08
RNU1-88P-201ENST00000459274 STAG3Q9UJ98 1225 aa8.28□□□□□ -1.08
RNU1-88P-201ENST00000459274 ABCA6Q8N139 1617 aa8.28□□□□□ -1.08
RNU1-88P-201ENST00000459274 ZC3H13Q5T200 1668 aaKnown RBP8.27□□□□□ -1.08
RNU1-88P-201ENST00000459274 DIP2CQ9Y2E4 1556 aa8.27□□□□□ -1.09
RNU1-88P-201ENST00000459274 KIF1BO60333 1816 aa8.27□□□□□ -1.09
RNU1-88P-201ENST00000459274 BCORL1Q5H9F3 1711 aa8.27□□□□□ -1.09
RNU1-88P-201ENST00000459274 DEPDC5O75140 1603 aa8.27□□□□□ -1.09
RNU1-88P-201ENST00000459274 PZPP20742 1482 aa8.26□□□□□ -1.09
RNU1-88P-201ENST00000459274 ANKRD30BQ9BXX2 1392 aa8.26□□□□□ -1.09
RNU1-88P-201ENST00000459274 CHGAP10645 457 aaKnown RBP8.26□□□□□ -1.09
RNU1-88P-201ENST00000459274 MLECQ14165 292 aa8.26□□□□□ -1.09
RNU1-88P-201ENST00000459274 CEP152O94986 1710 aa8.26□□□□□ -1.09
RNU1-88P-201ENST00000459274 RNF17Q9BXT8 1623 aaKnown RBP8.25□□□□□ -1.09
RNU1-88P-201ENST00000459274 PPP1R15AO75807 674 aaPredicted RBP8.25□□□□□ -1.09
RNU1-88P-201ENST00000459274 HDGFP51858 240 aaKnown RBP8.25□□□□□ -1.09
RNU1-88P-201ENST00000459274 ZNF326Q5BKZ1 582 aaKnown RBP8.25□□□□□ -1.09
RNU1-88P-201ENST00000459274 SPHKAPQ2M3C7 1700 aa8.25□□□□□ -1.09
RNU1-88P-201ENST00000459274 RPRD2Q5VT52 1461 aaKnown RBP8.25□□□□□ -1.09
RNU1-88P-201ENST00000459274 PRDM15P57071 1507 aaPredicted RBP8.24□□□□□ -1.09
RNU1-88P-201ENST00000459274 REREQ9P2R6 1566 aa8.24□□□□□ -1.09
RNU1-88P-201ENST00000459274 RGL3Q3MIN7 710 aa8.24□□□□□ -1.09
RNU1-88P-201ENST00000459274 DCAF11Q8TEB1 546 aa8.24□□□□□ -1.09
RNU1-88P-201ENST00000459274 KDM2AQ9Y2K7 1162 aa8.24□□□□□ -1.09
RNU1-88P-201ENST00000459274 E9PCH4 1651 aa8.24□□□□□ -1.09
RNU1-88P-201ENST00000459274 FRMPD1Q5SYB0 1578 aa8.23□□□□□ -1.09
RNU1-88P-201ENST00000459274 YEATS2Q9ULM3 1422 aa8.23□□□□□ -1.09
RNU1-88P-201ENST00000459274 ZNF316A6NFI3 1004 aaPredicted RBP8.23□□□□□ -1.09
RNU1-88P-201ENST00000459274 AGLP35573 1532 aa8.23□□□□□ -1.09
RNU1-88P-201ENST00000459274 ARHGEF40Q8TER5 1519 aa8.23□□□□□ -1.09
RNU1-88P-201ENST00000459274 CAMSAP1Q5T5Y3 1602 aa8.22□□□□□ -1.09
RNU1-88P-201ENST00000459274 L3MBTL2Q969R5 705 aa8.22□□□□□ -1.09
RNU1-88P-201ENST00000459274 SLC52A1Q9NWF4 448 aa8.22□□□□□ -1.09
RNU1-88P-201ENST00000459274 CNTLNQ9NXG0 1405 aa8.21□□□□□ -1.09
RNU1-88P-201ENST00000459274 EFCAB6Q5THR3 1501 aa8.2□□□□□ -1.1
RNU1-88P-201ENST00000459274 LMTK2Q8IWU2 1503 aa8.2□□□□□ -1.1
RNU1-88P-201ENST00000459274 EIF4G2P78344 907 aaKnown RBP eCLIP8.2□□□□□ -1.1
RNU1-88P-201ENST00000459274 CLTCQ00610 1675 aaKnown RBP8.2□□□□□ -1.1
RNU1-88P-201ENST00000459274 VWDEQ8N2E2 1590 aa8.19□□□□□ -1.1
RNU1-88P-201ENST00000459274 VGFO15240 615 aaPredicted RBP8.19□□□□□ -1.1
RNU1-88P-201ENST00000459274 SLC24A1O60721 1099 aa8.19□□□□□ -1.1
RNU1-88P-201ENST00000459274 RPGRIP1LQ68CZ1 1315 aa8.19□□□□□ -1.1
RNU1-88P-201ENST00000459274 ABCC3O15438 1527 aa8.19□□□□□ -1.1
RNU1-88P-201ENST00000459274 ARHGAP31Q2M1Z3 1444 aa8.18□□□□□ -1.1
RNU1-88P-201ENST00000459274 TRPM2O94759 1503 aa8.18□□□□□ -1.1
RNU1-88P-201ENST00000459274 DCAF8L1A6NGE4 600 aa8.17□□□□□ -1.1
RNU1-88P-201ENST00000459274 BCANQ96GW7 911 aa8.17□□□□□ -1.1
RNU1-88P-201ENST00000459274 COL17A1Q9UMD9 1497 aaPredicted RBP8.17□□□□□ -1.1
RNU1-88P-201ENST00000459274 FER1L4A9Z1Z3 1794 aa8.17□□□□□ -1.1
RNU1-88P-201ENST00000459274 PTPRTO14522 1441 aa8.16□□□□□ -1.1
RNU1-88P-201ENST00000459274 PLPPR3Q6T4P5 718 aa8.16□□□□□ -1.1
RNU1-88P-201ENST00000459274 MROH1Q8NDA8 1641 aa8.16□□□□□ -1.1
RNU1-88P-201ENST00000459274 CARD11Q9BXL7 1154 aa8.16□□□□□ -1.1
RNU1-88P-201ENST00000459274 MROH2AA6NES4 1674 aa8.15□□□□□ -1.1
RNU1-88P-201ENST00000459274 PREX1Q8TCU6 1659 aa8.15□□□□□ -1.1
RNU1-88P-201ENST00000459274 NPATQ14207 1427 aa8.15□□□□□ -1.1
RNU1-88P-201ENST00000459274 ROCK2O75116 1388 aaKnown RBP8.15□□□□□ -1.1
RNU1-88P-201ENST00000459274 ZMYM3Q14202 1370 aa8.15□□□□□ -1.1
RNU1-88P-201ENST00000459274 MAPK8IP2Q13387 824 aaPredicted RBP8.15□□□□□ -1.1
RNU1-88P-201ENST00000459274 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.15□□□□□ -1.1
RNU1-88P-201ENST00000459274 DIEXFQ68CQ4 756 aaKnown RBP8.14□□□□□ -1.11
RNU1-88P-201ENST00000459274 EID1Q9Y6B2 187 aa8.14□□□□□ -1.11
RNU1-88P-201ENST00000459274 CLTCL1P53675 1640 aa8.14□□□□□ -1.11
RNU1-88P-201ENST00000459274 NEURL4Q96JN8 1562 aa8.14□□□□□ -1.11
RNU1-88P-201ENST00000459274 SETD1BQ9UPS6 1966 aaKnown RBP8.13□□□□□ -1.11
RNU1-88P-201ENST00000459274 EIF3AQ14152 1382 aaKnown RBP8.13□□□□□ -1.11
RNU1-88P-201ENST00000459274 IDI1Q13907 227 aa8.12□□□□□ -1.11
RNU1-88P-201ENST00000459274 CDCA8Q53HL2 280 aa8.12□□□□□ -1.11
RNU1-88P-201ENST00000459274 TNRQ92752 1358 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms