RNA–Protein interactions for RNA: ENST00000458046.6

SYNE2-207, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 2,669 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-207ENST00000458046 L3MBTL2Q969R5 705 aa16.18■□□□□ 0.18
SYNE2-207ENST00000458046 TCOF1Q13428 1488 aaKnown RBP16.17■□□□□ 0.18
SYNE2-207ENST00000458046 HNRNPUQ00839 825 aaKnown RBP eCLIP16.17■□□□□ 0.18
SYNE2-207ENST00000458046 ADCY10Q96PN6 1610 aa16.17■□□□□ 0.18
SYNE2-207ENST00000458046 EIF4G2P78344 907 aaKnown RBP eCLIP16.16■□□□□ 0.18
SYNE2-207ENST00000458046 ZMYND15Q9H091 742 aa16.16■□□□□ 0.18
SYNE2-207ENST00000458046 HECW1Q76N89 1606 aa16.16■□□□□ 0.18
SYNE2-207ENST00000458046 IQGAP2Q13576 1575 aa16.16■□□□□ 0.18
SYNE2-207ENST00000458046 CCDC136Q96JN2 1154 aa16.15■□□□□ 0.18
SYNE2-207ENST00000458046 ZNF644Q9H582 1327 aaPredicted RBP16.14■□□□□ 0.18
SYNE2-207ENST00000458046 RGS22Q8NE09 1264 aa16.14■□□□□ 0.17
SYNE2-207ENST00000458046 MAP3K4Q9Y6R4 1608 aa16.13■□□□□ 0.17
SYNE2-207ENST00000458046 MIA2Q96PC5 1412 aa16.12■□□□□ 0.17
SYNE2-207ENST00000458046 C11orf95C9JLR9 678 aaPredicted RBP16.12■□□□□ 0.17
SYNE2-207ENST00000458046 KCTD17Q8N5Z5 321 aa16.12■□□□□ 0.17
SYNE2-207ENST00000458046 ZNF692Q9BU19 519 aaPredicted RBP16.12■□□□□ 0.17
SYNE2-207ENST00000458046 BRPF3Q9ULD4 1205 aa16.12■□□□□ 0.17
SYNE2-207ENST00000458046 RAD21O60216 631 aa16.12■□□□□ 0.17
SYNE2-207ENST00000458046 RSPH6AQ9H0K4 717 aa16.12■□□□□ 0.17
SYNE2-207ENST00000458046 SPRYD3Q8NCJ5 442 aa16.11■□□□□ 0.17
SYNE2-207ENST00000458046 PLB1Q6P1J6 1458 aa16.11■□□□□ 0.17
SYNE2-207ENST00000458046 MTMR7Q9Y216 660 aa16.1■□□□□ 0.17
SYNE2-207ENST00000458046 CCDC184Q52MB2 194 aa16.1■□□□□ 0.17
SYNE2-207ENST00000458046 BCCIPQ9P287 314 aaKnown RBP eCLIP16.1■□□□□ 0.17
SYNE2-207ENST00000458046 DMRT2Q9Y5R5 561 aa16.09■□□□□ 0.17
SYNE2-207ENST00000458046 ADAMTS12P58397 1594 aa16.09■□□□□ 0.17
SYNE2-207ENST00000458046 AKNAQ7Z591 1439 aa16.09■□□□□ 0.17
SYNE2-207ENST00000458046 GRIN2AQ12879 1464 aa16.08■□□□□ 0.17
SYNE2-207ENST00000458046 GCC2Q8IWJ2 1684 aa16.08■□□□□ 0.17
SYNE2-207ENST00000458046 NBPF8Q3BBV2 869 aa16.08■□□□□ 0.16
SYNE2-207ENST00000458046 FOXD4L5Q5VV16 416 aaPredicted RBP16.08■□□□□ 0.16
SYNE2-207ENST00000458046 FOXD4L4Q8WXT5 416 aaPredicted RBP16.08■□□□□ 0.16
SYNE2-207ENST00000458046 DAPK1P53355 1430 aa16.06■□□□□ 0.16
SYNE2-207ENST00000458046 COL17A1Q9UMD9 1497 aaPredicted RBP16.06■□□□□ 0.16
SYNE2-207ENST00000458046 ABCC5O15440 1437 aa16.05■□□□□ 0.16
SYNE2-207ENST00000458046 RSPH4AQ5TD94 716 aa16.05■□□□□ 0.16
SYNE2-207ENST00000458046 ANKRD30BQ9BXX2 1392 aa16.05■□□□□ 0.16
SYNE2-207ENST00000458046 FAM9BQ8IZU0 186 aa16.04■□□□□ 0.16
SYNE2-207ENST00000458046 RBM19Q9Y4C8 960 aaKnown RBP16.04■□□□□ 0.16
SYNE2-207ENST00000458046 RBM25P49756 843 aaKnown RBP16.03■□□□□ 0.16
SYNE2-207ENST00000458046 IFNLR1Q8IU57 520 aaPredicted RBP16.03■□□□□ 0.16
SYNE2-207ENST00000458046 ZNF777Q9ULD5 760 aaPredicted RBP16.03■□□□□ 0.16
SYNE2-207ENST00000458046 ZFP91Q96JP5 570 aaPredicted RBP16.02■□□□□ 0.16
SYNE2-207ENST00000458046 CNTLNQ9NXG0 1405 aa16.02■□□□□ 0.16
SYNE2-207ENST00000458046 CCDC7Q96M83 1385 aa16.02■□□□□ 0.16
SYNE2-207ENST00000458046 DISP1Q96F81 1524 aa16.02■□□□□ 0.15
SYNE2-207ENST00000458046 PRKRIP1Q9H875 184 aaPredicted RBP16.02■□□□□ 0.15
SYNE2-207ENST00000458046 ROCK1Q13464 1354 aa16.01■□□□□ 0.15
SYNE2-207ENST00000458046 NUP153P49790 1475 aaKnown RBP16.01■□□□□ 0.15
SYNE2-207ENST00000458046 CNGB1Q14028 1251 aaPredicted RBP16.01■□□□□ 0.15
SYNE2-207ENST00000458046 ANP32EQ9BTT0 268 aa16.01■□□□□ 0.15
SYNE2-207ENST00000458046 BCORL1Q5H9F3 1711 aa16■□□□□ 0.15
SYNE2-207ENST00000458046 PTPRTO14522 1441 aa16■□□□□ 0.15
SYNE2-207ENST00000458046 CFDP1Q9UEE9 299 aaPredicted RBP16■□□□□ 0.15
SYNE2-207ENST00000458046 RPRD2Q5VT52 1461 aaKnown RBP16■□□□□ 0.15
SYNE2-207ENST00000458046 MRS2Q9HD23 443 aa16■□□□□ 0.15
SYNE2-207ENST00000458046 PRG4Q92954 1404 aaPredicted RBP15.99■□□□□ 0.15
SYNE2-207ENST00000458046 NCOA1Q15788 1441 aa15.99■□□□□ 0.15
SYNE2-207ENST00000458046 ZNF326Q5BKZ1 582 aaKnown RBP15.98■□□□□ 0.15
SYNE2-207ENST00000458046 ZNF592Q92610 1267 aa15.98■□□□□ 0.15
SYNE2-207ENST00000458046 KIF7Q2M1P5 1343 aa15.97■□□□□ 0.15
SYNE2-207ENST00000458046 KIAA0556O60303 1618 aa15.97■□□□□ 0.15
SYNE2-207ENST00000458046 LTBP4Q8N2S1 1624 aa15.97■□□□□ 0.15
SYNE2-207ENST00000458046 TMED8Q6PL24 325 aaPredicted RBP15.97■□□□□ 0.15
SYNE2-207ENST00000458046 DNMT1P26358 1616 aaKnown RBP15.95■□□□□ 0.14
SYNE2-207ENST00000458046 CWC22Q9HCG8 908 aaKnown RBP15.93■□□□□ 0.14
SYNE2-207ENST00000458046 RAPGEF6Q8TEU7 1601 aa15.93■□□□□ 0.14
SYNE2-207ENST00000458046 A0A0U1RQG5 324 aaPredicted RBP15.92■□□□□ 0.14
SYNE2-207ENST00000458046 FAM177A1Q8N128 213 aaPredicted RBP15.92■□□□□ 0.14
SYNE2-207ENST00000458046 NEUROD2Q15784 382 aa15.92■□□□□ 0.14
SYNE2-207ENST00000458046 PIAS4Q8N2W9 510 aaPredicted RBP15.92■□□□□ 0.14
SYNE2-207ENST00000458046 SPATA31E1Q6ZUB1 1445 aa15.92■□□□□ 0.14
SYNE2-207ENST00000458046 TROQ12816 1431 aaPredicted RBP15.91■□□□□ 0.14
SYNE2-207ENST00000458046 PZPP20742 1482 aa15.9■□□□□ 0.14
SYNE2-207ENST00000458046 YEATS2Q9ULM3 1422 aa15.9■□□□□ 0.14
SYNE2-207ENST00000458046 CAMSAP2Q08AD1 1489 aa15.9■□□□□ 0.14
SYNE2-207ENST00000458046 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.89■□□□□ 0.13
SYNE2-207ENST00000458046 GPATCH8Q9UKJ3 1502 aaKnown RBP15.88■□□□□ 0.13
SYNE2-207ENST00000458046 TICAM2Q86XR7 235 aa15.88■□□□□ 0.13
SYNE2-207ENST00000458046 JPH4Q96JJ6 628 aa15.88■□□□□ 0.13
SYNE2-207ENST00000458046 MADDQ8WXG6 1647 aa15.87■□□□□ 0.13
SYNE2-207ENST00000458046 ZBED9Q6R2W3 1325 aa15.86■□□□□ 0.13
SYNE2-207ENST00000458046 SENP3-EIF4A1A0A087X0R7 540 aa15.86■□□□□ 0.13
SYNE2-207ENST00000458046 CERS3Q8IU89 383 aa15.85■□□□□ 0.13
SYNE2-207ENST00000458046 USP35Q9P2H5 1018 aa15.85■□□□□ 0.13
SYNE2-207ENST00000458046 KIAA1107Q9UPP5 1409 aa15.85■□□□□ 0.13
SYNE2-207ENST00000458046 PREX1Q8TCU6 1659 aa15.85■□□□□ 0.13
SYNE2-207ENST00000458046 ANO8Q9HCE9 1232 aaPredicted RBP15.85■□□□□ 0.13
SYNE2-207ENST00000458046 PPP4R2Q9NY27 417 aa15.85■□□□□ 0.13
SYNE2-207ENST00000458046 PLEKHD1A6NEE1 506 aa15.84■□□□□ 0.13
SYNE2-207ENST00000458046 APBB1O00213 710 aa15.84■□□□□ 0.13
SYNE2-207ENST00000458046 USP47Q96K76 1375 aa15.84■□□□□ 0.13
SYNE2-207ENST00000458046 ANKRD30AQ9BXX3 1397 aa15.84■□□□□ 0.13
SYNE2-207ENST00000458046 KIF14Q15058 1648 aa15.84■□□□□ 0.13
SYNE2-207ENST00000458046 ABCC2Q92887 1545 aa15.84■□□□□ 0.13
SYNE2-207ENST00000458046 IFFO2Q5TF58 517 aa15.83■□□□□ 0.12
SYNE2-207ENST00000458046 B4GALNT3Q6L9W6 998 aa15.83■□□□□ 0.12
SYNE2-207ENST00000458046 UHRF1BP1LA0JNW5 1464 aa15.82■□□□□ 0.12
SYNE2-207ENST00000458046 NUP155O75694 1391 aa15.82■□□□□ 0.12
SYNE2-207ENST00000458046 ANKRD50Q9ULJ7 1429 aa15.82■□□□□ 0.12
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