RNA–Protein interactions for RNA: ENST00000458034.1

RFX3-211, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-211ENST00000458034 PLEKHH2Q8IVE3 1493 aa15.06■□□□□ 0
RFX3-211ENST00000458034 PRKRIP1Q9H875 184 aaPredicted RBP15.05■□□□□ -0
RFX3-211ENST00000458034 KIF7Q2M1P5 1343 aa15.05■□□□□ -0
RFX3-211ENST00000458034 ROCK2O75116 1388 aaKnown RBP15.05■□□□□ -0
RFX3-211ENST00000458034 UNC13BO14795 1591 aa15.04■□□□□ -0
RFX3-211ENST00000458034 USP47Q96K76 1375 aa15.04■□□□□ -0
RFX3-211ENST00000458034 TSHZ2Q9NRE2 1034 aa15.03■□□□□ -0
RFX3-211ENST00000458034 PLXNC1O60486 1568 aa15.02■□□□□ -0
RFX3-211ENST00000458034 ABCC2Q92887 1545 aa15.02■□□□□ -0
RFX3-211ENST00000458034 C11orf95C9JLR9 678 aaPredicted RBP15.02■□□□□ -0
RFX3-211ENST00000458034 ERICH6BQ5W0A0 696 aa15.02■□□□□ -0
RFX3-211ENST00000458034 BCANQ96GW7 911 aa15.02■□□□□ -0
RFX3-211ENST00000458034 BCORL1Q5H9F3 1711 aa15.02□□□□□ -0.01
RFX3-211ENST00000458034 ARHGAP5Q13017 1502 aa15.02□□□□□ -0.01
RFX3-211ENST00000458034 MRS2Q9HD23 443 aa15□□□□□ -0.01
RFX3-211ENST00000458034 FAM135AQ9P2D6 1515 aa15□□□□□ -0.01
RFX3-211ENST00000458034 TTC37Q6PGP7 1564 aa14.99□□□□□ -0.01
RFX3-211ENST00000458034 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.98□□□□□ -0.01
RFX3-211ENST00000458034 SYCP2Q9BX26 1530 aa14.98□□□□□ -0.01
RFX3-211ENST00000458034 IQGAP3Q86VI3 1631 aa14.98□□□□□ -0.01
RFX3-211ENST00000458034 ZBED9Q6R2W3 1325 aa14.97□□□□□ -0.01
RFX3-211ENST00000458034 HNRNPMP52272 730 aaKnown RBP eCLIP14.97□□□□□ -0.01
RFX3-211ENST00000458034 LAMC1P11047 1609 aa14.96□□□□□ -0.01
RFX3-211ENST00000458034 ZNF326Q5BKZ1 582 aaKnown RBP14.95□□□□□ -0.02
RFX3-211ENST00000458034 DUOX2Q9NRD8 1548 aa14.95□□□□□ -0.02
RFX3-211ENST00000458034 TRPM1Q7Z4N2 1603 aa14.95□□□□□ -0.02
RFX3-211ENST00000458034 EIF2AK4Q9P2K8 1649 aaKnown RBP14.95□□□□□ -0.02
RFX3-211ENST00000458034 E9PCH4 1651 aa14.94□□□□□ -0.02
RFX3-211ENST00000458034 DHX29Q7Z478 1369 aaKnown RBP14.94□□□□□ -0.02
RFX3-211ENST00000458034 KTN1Q86UP2 1357 aaKnown RBP14.94□□□□□ -0.02
RFX3-211ENST00000458034 ZCCHC11Q5TAX3 1644 aaKnown RBP14.93□□□□□ -0.02
RFX3-211ENST00000458034 CARD11Q9BXL7 1154 aa14.93□□□□□ -0.02
RFX3-211ENST00000458034 UHRF1BP1LA0JNW5 1464 aa14.93□□□□□ -0.02
RFX3-211ENST00000458034 CCDC144AA2RUR9 1427 aa14.92□□□□□ -0.02
RFX3-211ENST00000458034 FAM9BQ8IZU0 186 aa14.92□□□□□ -0.02
RFX3-211ENST00000458034 ERBINQ96RT1 1412 aa14.92□□□□□ -0.02
RFX3-211ENST00000458034 CLASP1Q7Z460 1538 aa14.91□□□□□ -0.02
RFX3-211ENST00000458034 MAGI2Q86UL8 1455 aa14.89□□□□□ -0.03
RFX3-211ENST00000458034 CCDC184Q52MB2 194 aa14.89□□□□□ -0.03
RFX3-211ENST00000458034 ARAP3Q8WWN8 1544 aa14.88□□□□□ -0.03
RFX3-211ENST00000458034 POLR3GLQ9BT43 218 aa14.88□□□□□ -0.03
RFX3-211ENST00000458034 PRAG1Q86YV5 1406 aa14.88□□□□□ -0.03
RFX3-211ENST00000458034 ABCC1P33527 1531 aa14.87□□□□□ -0.03
RFX3-211ENST00000458034 PLCH2O75038 1416 aa14.87□□□□□ -0.03
RFX3-211ENST00000458034 TRHP20396 242 aaPredicted RBP14.87□□□□□ -0.03
RFX3-211ENST00000458034 DCAF11Q8TEB1 546 aa14.87□□□□□ -0.03
RFX3-211ENST00000458034 ATP10AO60312 1499 aa14.87□□□□□ -0.03
RFX3-211ENST00000458034 ERCC6L2Q5T890 1561 aa14.86□□□□□ -0.03
RFX3-211ENST00000458034 ABCB7O75027 752 aa14.86□□□□□ -0.03
RFX3-211ENST00000458034 PPP4R2Q9NY27 417 aa14.86□□□□□ -0.03
RFX3-211ENST00000458034 SMG6Q86US8 1419 aaKnown RBP14.85□□□□□ -0.03
RFX3-211ENST00000458034 SLC4A2P04920 1241 aa14.84□□□□□ -0.03
RFX3-211ENST00000458034 RALBP1Q15311 655 aa14.84□□□□□ -0.03
RFX3-211ENST00000458034 EFCAB2Q5VUJ9 269 aa14.84□□□□□ -0.03
RFX3-211ENST00000458034 KDM2AQ9Y2K7 1162 aa14.84□□□□□ -0.03
RFX3-211ENST00000458034 GPRASP1Q5JY77 1395 aa14.84□□□□□ -0.03
RFX3-211ENST00000458034 PRDM15P57071 1507 aaPredicted RBP14.83□□□□□ -0.04
RFX3-211ENST00000458034 BRD4O60885 1362 aaPredicted RBP14.83□□□□□ -0.04
RFX3-211ENST00000458034 A2MP01023 1474 aa14.82□□□□□ -0.04
RFX3-211ENST00000458034 RNF17Q9BXT8 1623 aaKnown RBP14.82□□□□□ -0.04
RFX3-211ENST00000458034 ST20-MTHFSA0A0A6YYL1 179 aa14.81□□□□□ -0.04
RFX3-211ENST00000458034 ZNF219Q9P2Y4 722 aaPredicted RBP14.81□□□□□ -0.04
RFX3-211ENST00000458034 MYBBP1AQ9BQG0 1328 aaKnown RBP14.81□□□□□ -0.04
RFX3-211ENST00000458034 RTEL1-TNFRSF6BF6WH68 1400 aa14.81□□□□□ -0.04
RFX3-211ENST00000458034 TMC1Q8TDI8 760 aa14.8□□□□□ -0.04
RFX3-211ENST00000458034 PLA2R1Q13018 1463 aa14.8□□□□□ -0.04
RFX3-211ENST00000458034 CEP152O94986 1710 aa14.8□□□□□ -0.04
RFX3-211ENST00000458034 COL17A1Q9UMD9 1497 aaPredicted RBP14.79□□□□□ -0.04
RFX3-211ENST00000458034 NUDCQ9Y266 331 aa14.79□□□□□ -0.04
RFX3-211ENST00000458034 SPHKAPQ2M3C7 1700 aa14.78□□□□□ -0.04
RFX3-211ENST00000458034 DEPDC5O75140 1603 aa14.77□□□□□ -0.04
RFX3-211ENST00000458034 RBM19Q9Y4C8 960 aaKnown RBP14.77□□□□□ -0.05
RFX3-211ENST00000458034 WASHC2CQ9Y4E1 1318 aa14.76□□□□□ -0.05
RFX3-211ENST00000458034 IRX6P78412 446 aaPredicted RBP14.76□□□□□ -0.05
RFX3-211ENST00000458034 TET3O43151 1660 aa14.76□□□□□ -0.05
RFX3-211ENST00000458034 TRPM2O94759 1503 aa14.76□□□□□ -0.05
RFX3-211ENST00000458034 ZFYVE16Q7Z3T8 1539 aa14.76□□□□□ -0.05
RFX3-211ENST00000458034 LRPPRCP42704 1394 aaKnown RBP14.75□□□□□ -0.05
RFX3-211ENST00000458034 ABCA9Q8IUA7 1624 aa14.75□□□□□ -0.05
RFX3-211ENST00000458034 PNISRQ8TF01 805 aaKnown RBP14.75□□□□□ -0.05
RFX3-211ENST00000458034 STAC3Q96MF2 364 aa14.75□□□□□ -0.05
RFX3-211ENST00000458034 IQGAP1P46940 1657 aa14.74□□□□□ -0.05
RFX3-211ENST00000458034 INSRP06213 1382 aa14.73□□□□□ -0.05
RFX3-211ENST00000458034 INO80Q9ULG1 1556 aaPredicted RBP14.73□□□□□ -0.05
RFX3-211ENST00000458034 SPAG9O60271 1321 aaKnown RBP14.73□□□□□ -0.05
RFX3-211ENST00000458034 ZMYM4Q5VZL5 1548 aa14.73□□□□□ -0.05
RFX3-211ENST00000458034 TRAPPC8Q9Y2L5 1435 aa14.73□□□□□ -0.05
RFX3-211ENST00000458034 MADDQ8WXG6 1647 aa14.73□□□□□ -0.05
RFX3-211ENST00000458034 NEURL4Q96JN8 1562 aa14.73□□□□□ -0.05
RFX3-211ENST00000458034 PARD3Q8TEW0 1356 aa14.73□□□□□ -0.05
RFX3-211ENST00000458034 KIAA1210Q9ULL0 1709 aa14.72□□□□□ -0.05
RFX3-211ENST00000458034 WDR7Q9Y4E6 1490 aa14.72□□□□□ -0.05
RFX3-211ENST00000458034 RGL3Q3MIN7 710 aa14.72□□□□□ -0.05
RFX3-211ENST00000458034 NLRP13Q86W25 1043 aa14.72□□□□□ -0.05
RFX3-211ENST00000458034 ANP32EQ9BTT0 268 aa14.72□□□□□ -0.05
RFX3-211ENST00000458034 KANK1Q14678 1352 aa14.72□□□□□ -0.05
RFX3-211ENST00000458034 TMF1P82094 1093 aa14.71□□□□□ -0.05
RFX3-211ENST00000458034 ATP7AQ04656 1500 aa14.71□□□□□ -0.06
RFX3-211ENST00000458034 RNF123Q5XPI4 1314 aa14.7□□□□□ -0.06
RFX3-211ENST00000458034 CNGB1Q14028 1251 aaPredicted RBP14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms