RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 NGEFQ8N5V2 710 aa24.5■■□□□ 1.51
SNX27-204ENST00000458013 CFAP44Q96MT7 982 aa24.49■■□□□ 1.51
SNX27-204ENST00000458013 HTATSF1O43719 755 aaKnown RBP24.49■■□□□ 1.51
SNX27-204ENST00000458013 CENPJQ9HC77 1338 aaPredicted RBP24.48■■□□□ 1.51
SNX27-204ENST00000458013 FRAT2O75474 233 aaPredicted RBP24.48■■□□□ 1.51
SNX27-204ENST00000458013 FHAD1B1AJZ9 1412 aa24.48■■□□□ 1.51
SNX27-204ENST00000458013 PTMSP20962 102 aa24.48■■□□□ 1.51
SNX27-204ENST00000458013 RALBP1Q15311 655 aa24.48■■□□□ 1.51
SNX27-204ENST00000458013 NECTIN2Q92692 538 aa24.47■■□□□ 1.51
SNX27-204ENST00000458013 TMX4Q9H1E5 349 aaPredicted RBP24.47■■□□□ 1.51
SNX27-204ENST00000458013 PATL2C9JE40 543 aaKnown RBP24.46■■□□□ 1.51
SNX27-204ENST00000458013 CCAR2Q8N163 923 aaKnown RBP24.46■■□□□ 1.51
SNX27-204ENST00000458013 GOLGA6L1Q8N7Z2 621 aa24.45■■□□□ 1.5
SNX27-204ENST00000458013 AMPHP49418 695 aa24.45■■□□□ 1.5
SNX27-204ENST00000458013 RAD21O60216 631 aa24.44■■□□□ 1.5
SNX27-204ENST00000458013 MARCH6O60337 910 aa24.44■■□□□ 1.5
SNX27-204ENST00000458013 NGDNQ8NEJ9 315 aaKnown RBP24.44■■□□□ 1.5
SNX27-204ENST00000458013 TRAK1Q9UPV9 953 aa24.44■■□□□ 1.5
SNX27-204ENST00000458013 FBXW7Q969H0 707 aa24.43■■□□□ 1.5
SNX27-204ENST00000458013 ANKRD45Q5TZF3 282 aa24.42■■□□□ 1.5
SNX27-204ENST00000458013 KIF16BQ96L93 1317 aa24.42■■□□□ 1.5
SNX27-204ENST00000458013 SF3A1Q15459 793 aaKnown RBP24.42■■□□□ 1.5
SNX27-204ENST00000458013 H3BQV1 296 aa24.41■■□□□ 1.5
SNX27-204ENST00000458013 FOSBP53539 338 aa24.41■■□□□ 1.5
SNX27-204ENST00000458013 IFFO2Q5TF58 517 aa24.41■■□□□ 1.5
SNX27-204ENST00000458013 KIF3BO15066 747 aa24.4■■□□□ 1.5
SNX27-204ENST00000458013 ZNF592Q92610 1267 aa24.39■■□□□ 1.49
SNX27-204ENST00000458013 HMMRO75330 724 aa24.38■■□□□ 1.49
SNX27-204ENST00000458013 TPD52L1Q16890 204 aaPredicted RBP24.38■■□□□ 1.49
SNX27-204ENST00000458013 L3MBTL2Q969R5 705 aa24.37■■□□□ 1.49
SNX27-204ENST00000458013 EXOC6Q8TAG9 804 aa24.37■■□□□ 1.49
SNX27-204ENST00000458013 CRBNQ96SW2 442 aa24.37■■□□□ 1.49
SNX27-204ENST00000458013 MCTP1Q6DN14 999 aa24.36■■□□□ 1.49
SNX27-204ENST00000458013 ST18O60284 1047 aa24.35■■□□□ 1.49
SNX27-204ENST00000458013 GTF2E1P29083 439 aaPredicted RBP24.35■■□□□ 1.49
SNX27-204ENST00000458013 CSPP1Q1MSJ5 1256 aa24.34■■□□□ 1.49
SNX27-204ENST00000458013 EIF3AQ14152 1382 aaKnown RBP24.33■■□□□ 1.49
SNX27-204ENST00000458013 TPM3P06753 285 aa24.32■■□□□ 1.48
SNX27-204ENST00000458013 EIF2S2P20042 333 aaKnown RBP24.32■■□□□ 1.48
SNX27-204ENST00000458013 PANK3Q9H999 370 aa24.32■■□□□ 1.48
SNX27-204ENST00000458013 KDM4AO75164 1064 aa24.31■■□□□ 1.48
SNX27-204ENST00000458013 FAM184AQ8NB25 1140 aa24.31■■□□□ 1.48
SNX27-204ENST00000458013 TERF2IPQ9NYB0 399 aa24.3■■□□□ 1.48
SNX27-204ENST00000458013 DDX49Q9Y6V7 483 aaKnown RBP24.3■■□□□ 1.48
SNX27-204ENST00000458013 MSH5O43196 834 aa24.29■■□□□ 1.48
SNX27-204ENST00000458013 COG6Q9Y2V7 657 aa24.29■■□□□ 1.48
SNX27-204ENST00000458013 CEP89Q96ST8 783 aa24.28■■□□□ 1.48
SNX27-204ENST00000458013 CECR2Q9BXF3 1484 aa24.27■■□□□ 1.48
SNX27-204ENST00000458013 PDE4AP27815 886 aa24.26■■□□□ 1.47
SNX27-204ENST00000458013 HSP90AA2PQ14568 343 aaPredicted RBP24.26■■□□□ 1.47
SNX27-204ENST00000458013 TIMELESSQ9UNS1 1208 aa24.26■■□□□ 1.47
SNX27-204ENST00000458013 PHF14O94880 888 aa24.26■■□□□ 1.47
SNX27-204ENST00000458013 VPS8Q8N3P4 1428 aa24.24■■□□□ 1.47
SNX27-204ENST00000458013 WASHC2CQ9Y4E1 1318 aa24.24■■□□□ 1.47
SNX27-204ENST00000458013 PCMTD1Q96MG8 357 aaPredicted RBP24.24■■□□□ 1.47
SNX27-204ENST00000458013 ANKRD30AQ9BXX3 1397 aa24.24■■□□□ 1.47
SNX27-204ENST00000458013 ANO2Q9NQ90 1003 aa24.23■■□□□ 1.47
SNX27-204ENST00000458013 GOLGA6L19H0YKK7 550 aa24.22■■□□□ 1.47
SNX27-204ENST00000458013 SAMD1Q6SPF0 538 aaPredicted RBP24.22■■□□□ 1.47
SNX27-204ENST00000458013 DDX11L8A8MPP1 907 aa24.22■■□□□ 1.47
SNX27-204ENST00000458013 CCDC34Q96HJ3 373 aa24.22■■□□□ 1.47
SNX27-204ENST00000458013 ST20-MTHFSA0A0A6YYL1 179 aa24.21■■□□□ 1.47
SNX27-204ENST00000458013 TDRD9Q8NDG6 1382 aaKnown RBP24.19■■□□□ 1.46
SNX27-204ENST00000458013 FAM161AQ3B820 660 aa24.19■■□□□ 1.46
SNX27-204ENST00000458013 NLRP13Q86W25 1043 aa24.19■■□□□ 1.46
SNX27-204ENST00000458013 BECN2A8MW95 431 aa24.18■■□□□ 1.46
SNX27-204ENST00000458013 EID1Q9Y6B2 187 aa24.18■■□□□ 1.46
SNX27-204ENST00000458013 VSIG10Q8N0Z9 540 aa24.18■■□□□ 1.46
SNX27-204ENST00000458013 FHOD3Q2V2M9 1422 aa24.18■■□□□ 1.46
SNX27-204ENST00000458013 APPP05067 770 aa24.18■■□□□ 1.46
SNX27-204ENST00000458013 CCDC88BA6NC98 1476 aa24.17■■□□□ 1.46
SNX27-204ENST00000458013 AKAP17AQ02040 695 aaKnown RBP24.17■■□□□ 1.46
SNX27-204ENST00000458013 RRP1P56182 461 aaKnown RBP24.17■■□□□ 1.46
SNX27-204ENST00000458013 C1orf141Q5JVX7 400 aa24.17■■□□□ 1.46
SNX27-204ENST00000458013 ZNF771Q7L3S4 317 aaPredicted RBP24.17■■□□□ 1.46
SNX27-204ENST00000458013 SYTL4Q96C24 671 aaPredicted RBP24.17■■□□□ 1.46
SNX27-204ENST00000458013 EVA1CP58658 441 aa24.17■■□□□ 1.46
SNX27-204ENST00000458013 MINK1Q8N4C8 1332 aaPredicted RBP24.17■■□□□ 1.46
SNX27-204ENST00000458013 KIF15Q9NS87 1388 aa24.16■■□□□ 1.46
SNX27-204ENST00000458013 MYBBP1AQ9BQG0 1328 aaKnown RBP24.16■■□□□ 1.46
SNX27-204ENST00000458013 GSE1Q14687 1217 aa24.15■■□□□ 1.46
SNX27-204ENST00000458013 LMOD3Q0VAK6 560 aa24.15■■□□□ 1.46
SNX27-204ENST00000458013 DIAPH3Q9NSV4 1193 aa24.15■■□□□ 1.46
SNX27-204ENST00000458013 CENPQQ7L2Z9 268 aaPredicted RBP24.14■■□□□ 1.46
SNX27-204ENST00000458013 TSR1Q2NL82 804 aaKnown RBP24.14■■□□□ 1.45
SNX27-204ENST00000458013 EFCAB2Q5VUJ9 269 aa24.13■■□□□ 1.45
SNX27-204ENST00000458013 ZNF428Q96B54 188 aa24.13■■□□□ 1.45
SNX27-204ENST00000458013 DHX16O60231 1041 aaKnown RBP24.12■■□□□ 1.45
SNX27-204ENST00000458013 FMN1Q68DA7 1419 aa24.12■■□□□ 1.45
SNX27-204ENST00000458013 FYB1O15117 783 aa24.11■■□□□ 1.45
SNX27-204ENST00000458013 ZKSCAN2Q63HK3 967 aa24.11■■□□□ 1.45
SNX27-204ENST00000458013 CARMIL2Q6F5E8 1435 aa24.11■■□□□ 1.45
SNX27-204ENST00000458013 APAF1O14727 1248 aa24.1■■□□□ 1.45
SNX27-204ENST00000458013 COG3Q96JB2 828 aa24.1■■□□□ 1.45
SNX27-204ENST00000458013 MTMR7Q9Y216 660 aa24.1■■□□□ 1.45
SNX27-204ENST00000458013 C9orf78Q9NZ63 289 aaPredicted RBP24.1■■□□□ 1.45
SNX27-204ENST00000458013 FAM13BQ9NYF5 915 aa24.1■■□□□ 1.45
SNX27-204ENST00000458013 TCEAL9Q9UHQ7 104 aa24.09■■□□□ 1.45
SNX27-204ENST00000458013 TPM2P07951 284 aa24.08■■□□□ 1.45
SNX27-204ENST00000458013 SETQ01105 290 aaPredicted RBP24.08■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms