RNA–Protein interactions for RNA: ENST00000457839.6

MBD1-210, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MBD1, Length 2,473 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-210ENST00000457839 PLA2R1Q13018 1463 aa23.11■■□□□ 1.29
MBD1-210ENST00000457839 ZNF518AQ6AHZ1 1483 aa23.11■■□□□ 1.29
MBD1-210ENST00000457839 MAGI2Q86UL8 1455 aa23.11■■□□□ 1.29
MBD1-210ENST00000457839 EIF4G2P78344 907 aaKnown RBP eCLIP23.09■■□□□ 1.29
MBD1-210ENST00000457839 RGL3Q3MIN7 710 aa23.09■■□□□ 1.29
MBD1-210ENST00000457839 FAM69CQ0P6D2 419 aa23.08■■□□□ 1.29
MBD1-210ENST00000457839 DCAF11Q8TEB1 546 aa23.08■■□□□ 1.29
MBD1-210ENST00000457839 CCDC144AA2RUR9 1427 aa23.08■■□□□ 1.29
MBD1-210ENST00000457839 KIDINS220Q9ULH0 1771 aa23.08■■□□□ 1.28
MBD1-210ENST00000457839 POGZQ7Z3K3 1410 aa23.07■■□□□ 1.28
MBD1-210ENST00000457839 DHX29Q7Z478 1369 aaKnown RBP23.07■■□□□ 1.28
MBD1-210ENST00000457839 CFAP74Q9C0B2 1584 aa23.03■■□□□ 1.28
MBD1-210ENST00000457839 NEO1Q92859 1461 aa23■■□□□ 1.27
MBD1-210ENST00000457839 C11orf95C9JLR9 678 aaPredicted RBP23■■□□□ 1.27
MBD1-210ENST00000457839 WASHC2AQ641Q2 1341 aa23■■□□□ 1.27
MBD1-210ENST00000457839 KDM5CP41229 1560 aa22.99■■□□□ 1.27
MBD1-210ENST00000457839 MAP3K4Q9Y6R4 1608 aa22.99■■□□□ 1.27
MBD1-210ENST00000457839 A2MP01023 1474 aa22.98■■□□□ 1.27
MBD1-210ENST00000457839 DEPDC5O75140 1603 aa22.97■■□□□ 1.27
MBD1-210ENST00000457839 KANK1Q14678 1352 aa22.97■■□□□ 1.27
MBD1-210ENST00000457839 E9PCH4 1651 aa22.97■■□□□ 1.27
MBD1-210ENST00000457839 GGT6Q6P531 493 aa22.96■■□□□ 1.27
MBD1-210ENST00000457839 MLH3Q9UHC1 1453 aa22.96■■□□□ 1.27
MBD1-210ENST00000457839 HECW2Q9P2P5 1572 aa22.94■■□□□ 1.26
MBD1-210ENST00000457839 SPATA31E1Q6ZUB1 1445 aa22.94■■□□□ 1.26
MBD1-210ENST00000457839 MROH1Q8NDA8 1641 aa22.94■■□□□ 1.26
MBD1-210ENST00000457839 DIP2BQ9P265 1576 aa22.94■■□□□ 1.26
MBD1-210ENST00000457839 UHRF1BP1Q6BDS2 1440 aa22.94■■□□□ 1.26
MBD1-210ENST00000457839 ATP10AO60312 1499 aa22.92■■□□□ 1.26
MBD1-210ENST00000457839 GLI2P10070 1586 aa22.92■■□□□ 1.26
MBD1-210ENST00000457839 TSPOAP1O95153 1857 aa22.92■■□□□ 1.26
MBD1-210ENST00000457839 FRMPD1Q5SYB0 1578 aa22.92■■□□□ 1.26
MBD1-210ENST00000457839 CARD11Q9BXL7 1154 aa22.91■■□□□ 1.26
MBD1-210ENST00000457839 ABCA6Q8N139 1617 aa22.91■■□□□ 1.26
MBD1-210ENST00000457839 USP47Q96K76 1375 aa22.91■■□□□ 1.26
MBD1-210ENST00000457839 EIF2AK4Q9P2K8 1649 aaKnown RBP22.91■■□□□ 1.26
MBD1-210ENST00000457839 PRDM15P57071 1507 aaPredicted RBP22.9■■□□□ 1.26
MBD1-210ENST00000457839 VWDEQ8N2E2 1590 aa22.9■■□□□ 1.26
MBD1-210ENST00000457839 TET3O43151 1660 aa22.88■■□□□ 1.25
MBD1-210ENST00000457839 YEATS2Q9ULM3 1422 aa22.88■■□□□ 1.25
MBD1-210ENST00000457839 RALGAPBQ86X10 1494 aa22.87■■□□□ 1.25
MBD1-210ENST00000457839 RICTORQ6R327 1708 aa22.86■■□□□ 1.25
MBD1-210ENST00000457839 NBPF1Q3BBV0 1214 aa22.86■■□□□ 1.25
MBD1-210ENST00000457839 CENPBP07199 599 aaPredicted RBP22.86■■□□□ 1.25
MBD1-210ENST00000457839 PRAG1Q86YV5 1406 aa22.85■■□□□ 1.25
MBD1-210ENST00000457839 CCDC7Q96M83 1385 aa22.85■■□□□ 1.25
MBD1-210ENST00000457839 PTPRTO14522 1441 aa22.85■■□□□ 1.25
MBD1-210ENST00000457839 ROCK2O75116 1388 aaKnown RBP22.85■■□□□ 1.25
MBD1-210ENST00000457839 KIF7Q2M1P5 1343 aa22.84■■□□□ 1.25
MBD1-210ENST00000457839 ANP32CO43423 234 aa22.84■■□□□ 1.25
MBD1-210ENST00000457839 TRPM2O94759 1503 aa22.84■■□□□ 1.25
MBD1-210ENST00000457839 SPHKAPQ2M3C7 1700 aa22.83■■□□□ 1.25
MBD1-210ENST00000457839 MYT1Q01538 1121 aa22.83■■□□□ 1.25
MBD1-210ENST00000457839 POLR3GLQ9BT43 218 aa22.83■■□□□ 1.25
MBD1-210ENST00000457839 UGGT1Q9NYU2 1555 aa22.83■■□□□ 1.24
MBD1-210ENST00000457839 DIP2CQ9Y2E4 1556 aa22.82■■□□□ 1.24
MBD1-210ENST00000457839 CEP152O94986 1710 aa22.82■■□□□ 1.24
MBD1-210ENST00000457839 WASHC2CQ9Y4E1 1318 aa22.82■■□□□ 1.24
MBD1-210ENST00000457839 CLTCL1P53675 1640 aa22.82■■□□□ 1.24
MBD1-210ENST00000457839 PPRC1Q5VV67 1664 aaKnown RBP22.81■■□□□ 1.24
MBD1-210ENST00000457839 ST20-MTHFSA0A0A6YYL1 179 aa22.81■■□□□ 1.24
MBD1-210ENST00000457839 RNF17Q9BXT8 1623 aaKnown RBP22.8■■□□□ 1.24
MBD1-210ENST00000457839 EFCAB6Q5THR3 1501 aa22.79■■□□□ 1.24
MBD1-210ENST00000457839 CFAP65Q6ZU64 1925 aaKnown RBP22.79■■□□□ 1.24
MBD1-210ENST00000457839 BCORL1Q5H9F3 1711 aa22.78■■□□□ 1.24
MBD1-210ENST00000457839 TRPM1Q7Z4N2 1603 aa22.76■■□□□ 1.23
MBD1-210ENST00000457839 NPATQ14207 1427 aa22.75■■□□□ 1.23
MBD1-210ENST00000457839 LMTK2Q8IWU2 1503 aa22.74■■□□□ 1.23
MBD1-210ENST00000457839 CHGAP10645 457 aaKnown RBP22.73■■□□□ 1.23
MBD1-210ENST00000457839 CNTLNQ9NXG0 1405 aa22.72■■□□□ 1.23
MBD1-210ENST00000457839 KIF13AQ9H1H9 1805 aa22.72■■□□□ 1.23
MBD1-210ENST00000457839 ABCC3O15438 1527 aa22.72■■□□□ 1.23
MBD1-210ENST00000457839 COL17A1Q9UMD9 1497 aaPredicted RBP22.71■■□□□ 1.23
MBD1-210ENST00000457839 SCAF1Q9H7N4 1312 aaKnown RBP22.7■■□□□ 1.22
MBD1-210ENST00000457839 CNGB1Q14028 1251 aaPredicted RBP22.69■■□□□ 1.22
MBD1-210ENST00000457839 ZMYM4Q5VZL5 1548 aa22.67■■□□□ 1.22
MBD1-210ENST00000457839 GPRASP1Q5JY77 1395 aa22.67■■□□□ 1.22
MBD1-210ENST00000457839 POLR1AO95602 1720 aaPredicted RBP22.65■■□□□ 1.22
MBD1-210ENST00000457839 CCER2I3L3R5 266 aa22.64■■□□□ 1.21
MBD1-210ENST00000457839 ADGRF5Q8IZF2 1346 aa22.64■■□□□ 1.21
MBD1-210ENST00000457839 MADDQ8WXG6 1647 aa22.64■■□□□ 1.21
MBD1-210ENST00000457839 CAMSAP1Q5T5Y3 1602 aa22.63■■□□□ 1.21
MBD1-210ENST00000457839 MLECQ14165 292 aa22.63■■□□□ 1.21
MBD1-210ENST00000457839 MROH2AA6NES4 1674 aa22.61■■□□□ 1.21
MBD1-210ENST00000457839 SIGLEC1Q9BZZ2 1709 aa22.61■■□□□ 1.21
MBD1-210ENST00000457839 KIF1BO60333 1816 aa22.61■■□□□ 1.21
MBD1-210ENST00000457839 CFAP70Q5T0N1 1121 aa22.59■■□□□ 1.21
MBD1-210ENST00000457839 PRKRIP1Q9H875 184 aaPredicted RBP22.59■■□□□ 1.21
MBD1-210ENST00000457839 NUTM2DQ5VT03 806 aaPredicted RBP22.58■■□□□ 1.21
MBD1-210ENST00000457839 TESK2Q96S53 571 aa22.58■■□□□ 1.21
MBD1-210ENST00000457839 CCDC184Q52MB2 194 aa22.58■■□□□ 1.21
MBD1-210ENST00000457839 FBXO31Q5XUX0 539 aaPredicted RBP22.57■■□□□ 1.2
MBD1-210ENST00000457839 NOS1P29475 1434 aa22.57■■□□□ 1.2
MBD1-210ENST00000457839 ARID4BQ4LE39 1312 aaPredicted RBP22.56■■□□□ 1.2
MBD1-210ENST00000457839 GTF3C3Q9Y5Q9 886 aa22.56■■□□□ 1.2
MBD1-210ENST00000457839 STAC3Q96MF2 364 aa22.56■■□□□ 1.2
MBD1-210ENST00000457839 SENP3Q9H4L4 574 aaPredicted RBP22.55■■□□□ 1.2
MBD1-210ENST00000457839 IDI1Q13907 227 aa22.55■■□□□ 1.2
MBD1-210ENST00000457839 DISP3Q9P2K9 1392 aa22.55■■□□□ 1.2
MBD1-210ENST00000457839 ADGRB3O60242 1522 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms